RNA–Protein interactions for RNA: ENST00000481116.5

ABCF3-215, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-215ENST00000481116 SVILO95425 2214 aa12.07□□□□□ -0.48
ABCF3-215ENST00000481116 DYTNA2CJ06 578 aa12.07□□□□□ -0.48
ABCF3-215ENST00000481116 B3GALT2O43825 422 aa12.07□□□□□ -0.48
ABCF3-215ENST00000481116 SNRPAP09012 282 aaKnown RBP12.07□□□□□ -0.48
ABCF3-215ENST00000481116 EEF1DP29692 281 aaKnown RBP12.07□□□□□ -0.48
ABCF3-215ENST00000481116 PIK3CGP48736 1102 aa12.07□□□□□ -0.48
ABCF3-215ENST00000481116 LIM2P55344 173 aa12.07□□□□□ -0.48
ABCF3-215ENST00000481116 RAB38P57729 211 aa12.07□□□□□ -0.48
ABCF3-215ENST00000481116 SLC26A5P58743 744 aa12.07□□□□□ -0.48
ABCF3-215ENST00000481116 DDX39BQ13838 428 aaKnown RBP12.07□□□□□ -0.48
ABCF3-215ENST00000481116 GTF2H2Q13888 395 aa12.07□□□□□ -0.48
ABCF3-215ENST00000481116 UBAP2LQ14157 1087 aaKnown RBP12.07□□□□□ -0.48
ABCF3-215ENST00000481116 SLC29A2Q14542 456 aa12.07□□□□□ -0.48
ABCF3-215ENST00000481116 PCBP2Q15366 365 aaKnown RBP eCLIP12.07□□□□□ -0.48
ABCF3-215ENST00000481116 TLR1Q15399 786 aa12.07□□□□□ -0.48
ABCF3-215ENST00000481116 EXT1Q16394 746 aa12.07□□□□□ -0.48
ABCF3-215ENST00000481116 ABHD17BQ5VST6 288 aa12.07□□□□□ -0.48
ABCF3-215ENST00000481116 FAM219BQ5XKK7 198 aa12.07□□□□□ -0.48
ABCF3-215ENST00000481116 GRHL2Q6ISB3 625 aa12.07□□□□□ -0.48
ABCF3-215ENST00000481116 GTF2H2CQ6P1K8 395 aa12.07□□□□□ -0.48
ABCF3-215ENST00000481116 TAOK1Q7L7X3 1001 aa12.07□□□□□ -0.48
ABCF3-215ENST00000481116 CLNKQ7Z7G1 428 aa12.07□□□□□ -0.48
ABCF3-215ENST00000481116 CRLF3Q8IUI8 442 aa12.07□□□□□ -0.48
ABCF3-215ENST00000481116 HAS2Q92819 552 aa12.07□□□□□ -0.48
ABCF3-215ENST00000481116 SEC16BQ96JE7 1060 aa12.07□□□□□ -0.48
ABCF3-215ENST00000481116 NSUN5Q96P11 429 aaKnown RBP12.07□□□□□ -0.48
ABCF3-215ENST00000481116 CDK15Q96Q40 435 aa12.07□□□□□ -0.48
ABCF3-215ENST00000481116 SERINC2Q96SA4 455 aa12.07□□□□□ -0.48
ABCF3-215ENST00000481116 COL12A1Q99715 3063 aa12.07□□□□□ -0.48
ABCF3-215ENST00000481116 NPLQ9BXD5 320 aaPredicted RBP12.07□□□□□ -0.48
ABCF3-215ENST00000481116 TXLNGYQ9BZA5 131 aa12.07□□□□□ -0.48
ABCF3-215ENST00000481116 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.07□□□□□ -0.48
ABCF3-215ENST00000481116 EPB41L4BQ9H329 900 aa12.07□□□□□ -0.48
ABCF3-215ENST00000481116 OR51B5Q9H339 312 aa12.07□□□□□ -0.48
ABCF3-215ENST00000481116 IPPKQ9H8X2 491 aa12.07□□□□□ -0.48
ABCF3-215ENST00000481116 COPS7BQ9H9Q2 264 aaPredicted RBP12.07□□□□□ -0.48
ABCF3-215ENST00000481116 CLK4Q9HAZ1 481 aaKnown RBP12.07□□□□□ -0.48
ABCF3-215ENST00000481116 PRDM9Q9NQV7 894 aa12.07□□□□□ -0.48
ABCF3-215ENST00000481116 XPR1Q9UBH6 696 aa12.07□□□□□ -0.48
ABCF3-215ENST00000481116 RNF11Q9Y3C5 154 aa12.07□□□□□ -0.48
ABCF3-215ENST00000481116 IGKV3D-11A0A0A0MRZ8 115 aa12.06□□□□□ -0.48
ABCF3-215ENST00000481116 TCRBV16S1A1N1A0A5B0 115 aa12.06□□□□□ -0.48
ABCF3-215ENST00000481116 E2F3O00716 465 aa12.06□□□□□ -0.48
ABCF3-215ENST00000481116 OR7A17O14581 309 aa12.06□□□□□ -0.48
ABCF3-215ENST00000481116 ABHD2P08910 425 aa12.06□□□□□ -0.48
ABCF3-215ENST00000481116 RBP1P09455 135 aa12.06□□□□□ -0.48
ABCF3-215ENST00000481116 SBK3P0C264 359 aa12.06□□□□□ -0.48
ABCF3-215ENST00000481116 CNTFP26441 200 aa12.06□□□□□ -0.48
ABCF3-215ENST00000481116 PPP2R1BP30154 601 aa12.06□□□□□ -0.48
ABCF3-215ENST00000481116 TSFMP43897 325 aaKnown RBP12.06□□□□□ -0.48
ABCF3-215ENST00000481116 TNFSF10P50591 281 aa12.06□□□□□ -0.48
ABCF3-215ENST00000481116 MTTPP55157 894 aa12.06□□□□□ -0.48
ABCF3-215ENST00000481116 PCDH1Q08174 1060 aa12.06□□□□□ -0.48
ABCF3-215ENST00000481116 ACER2Q5QJU3 275 aa12.06□□□□□ -0.48
ABCF3-215ENST00000481116 TEX35Q5T0J7 233 aa12.06□□□□□ -0.48
ABCF3-215ENST00000481116 H3F3CQ6NXT2 135 aa12.06□□□□□ -0.48
ABCF3-215ENST00000481116 ADGRD1Q6QNK2 874 aa12.06□□□□□ -0.48
ABCF3-215ENST00000481116 TRMT10CQ7L0Y3 403 aaKnown RBP12.06□□□□□ -0.48
ABCF3-215ENST00000481116 SCUBE1Q8IWY4 988 aa12.06□□□□□ -0.48
ABCF3-215ENST00000481116 BEST3Q8N1M1 668 aa12.06□□□□□ -0.48
ABCF3-215ENST00000481116 HUS1BQ8NHY5 278 aa12.06□□□□□ -0.48
ABCF3-215ENST00000481116 GRHL3Q8TE85 626 aa12.06□□□□□ -0.48
ABCF3-215ENST00000481116 MTFMTQ96DP5 389 aaKnown RBP12.06□□□□□ -0.48
ABCF3-215ENST00000481116 MTERF1Q99551 399 aaKnown RBP12.06□□□□□ -0.48
ABCF3-215ENST00000481116 MAPKAP1Q9BPZ7 522 aa12.06□□□□□ -0.48
ABCF3-215ENST00000481116 ACTR8Q9H981 624 aa12.06□□□□□ -0.48
ABCF3-215ENST00000481116 MMP25Q9NPA2 562 aa12.06□□□□□ -0.48
ABCF3-215ENST00000481116 PRTFDC1Q9NRG1 225 aa12.06□□□□□ -0.48
ABCF3-215ENST00000481116 PNO1Q9NRX1 252 aaKnown RBP12.06□□□□□ -0.48
ABCF3-215ENST00000481116 ANKRD10Q9NXR5 420 aa12.06□□□□□ -0.48
ABCF3-215ENST00000481116 KCMF1Q9P0J7 381 aa12.06□□□□□ -0.48
ABCF3-215ENST00000481116 DAPP1Q9UN19 280 aa12.06□□□□□ -0.48
ABCF3-215ENST00000481116 CLDN16Q9Y5I7 305 aa12.06□□□□□ -0.48
ABCF3-215ENST00000481116 A0A088AWK7 358 aa12.05□□□□□ -0.48
ABCF3-215ENST00000481116 CCDC189A1A4V9 331 aa12.05□□□□□ -0.48
ABCF3-215ENST00000481116 CLEC18AA5D8T8 446 aa12.05□□□□□ -0.48
ABCF3-215ENST00000481116 SAGE2PA6NJ88 616 aa12.05□□□□□ -0.48
ABCF3-215ENST00000481116 FOXO6A8MYZ6 492 aa12.05□□□□□ -0.48
ABCF3-215ENST00000481116 CYR61O00622 381 aa12.05□□□□□ -0.48
ABCF3-215ENST00000481116 CBX6O95503 412 aa12.05□□□□□ -0.48
ABCF3-215ENST00000481116 ZNF10P21506 573 aaPredicted RBP12.05□□□□□ -0.48
ABCF3-215ENST00000481116 ATP5A1P25705 553 aaKnown RBP12.05□□□□□ -0.48
ABCF3-215ENST00000481116 NEK2P51955 445 aa12.05□□□□□ -0.48
ABCF3-215ENST00000481116 RPS13P62277 151 aaKnown RBP12.05□□□□□ -0.48
ABCF3-215ENST00000481116 AP2B1P63010 937 aa12.05□□□□□ -0.48
ABCF3-215ENST00000481116 SLC13A2Q13183 592 aa12.05□□□□□ -0.48
ABCF3-215ENST00000481116 CPSF6Q16630 551 aaKnown RBP eCLIP12.05□□□□□ -0.48
ABCF3-215ENST00000481116 TSNAXIP1Q2TAA8 658 aa12.05□□□□□ -0.48
ABCF3-215ENST00000481116 DEPDC1Q5TB30 811 aa12.05□□□□□ -0.48
ABCF3-215ENST00000481116 KHDRBS2Q5VWX1 349 aaKnown RBP12.05□□□□□ -0.48
ABCF3-215ENST00000481116 LIPJQ5W064 366 aa12.05□□□□□ -0.48
ABCF3-215ENST00000481116 CLEC18BQ6UXF7 455 aa12.05□□□□□ -0.48
ABCF3-215ENST00000481116 TMEM151AQ8N4L1 468 aa12.05□□□□□ -0.48
ABCF3-215ENST00000481116 ACOT4Q8N9L9 421 aa12.05□□□□□ -0.48
ABCF3-215ENST00000481116 CLEC18CQ8NCF0 446 aa12.05□□□□□ -0.48
ABCF3-215ENST00000481116 NFAM1Q8NET5 270 aaPredicted RBP12.05□□□□□ -0.48
ABCF3-215ENST00000481116 OR52B6Q8NGF0 335 aa12.05□□□□□ -0.48
ABCF3-215ENST00000481116 PRR7Q8TB68 274 aa12.05□□□□□ -0.48
ABCF3-215ENST00000481116 ELP5Q8TE02 316 aa12.05□□□□□ -0.48
ABCF3-215ENST00000481116 UBE2E3Q969T4 207 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms