RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 HYAL2Q12891 473 aa10.73□□□□□ -0.69
CCM2-213ENST00000480658 ELAVL1Q15717 326 aaKnown RBP10.73□□□□□ -0.69
CCM2-213ENST00000480658 SCUBE1Q8IWY4 988 aa10.73□□□□□ -0.69
CCM2-213ENST00000480658 CYP4X1Q8N118 509 aa10.73□□□□□ -0.69
CCM2-213ENST00000480658 OR14A16Q8NHC5 309 aa10.73□□□□□ -0.69
CCM2-213ENST00000480658 FBF1Q8TES7 1133 aa10.73□□□□□ -0.69
CCM2-213ENST00000480658 TSLPQ969D9 159 aa10.73□□□□□ -0.69
CCM2-213ENST00000480658 RELTQ969Z4 430 aa10.73□□□□□ -0.69
CCM2-213ENST00000480658 CMTM7Q96FZ5 175 aa10.73□□□□□ -0.69
CCM2-213ENST00000480658 ART5Q96L15 291 aa10.73□□□□□ -0.69
CCM2-213ENST00000480658 MESP1Q9BRJ9 268 aa10.73□□□□□ -0.69
CCM2-213ENST00000480658 TMEM79Q9BSE2 394 aa10.73□□□□□ -0.69
CCM2-213ENST00000480658 SPNS1Q9H2V7 528 aa10.73□□□□□ -0.69
CCM2-213ENST00000480658 TRIM45Q9H8W5 580 aaPredicted RBP10.73□□□□□ -0.69
CCM2-213ENST00000480658 CAB39LQ9H9S4 337 aa10.73□□□□□ -0.69
CCM2-213ENST00000480658 PRTFDC1Q9NRG1 225 aa10.73□□□□□ -0.69
CCM2-213ENST00000480658 SMYD2Q9NRG4 433 aa10.73□□□□□ -0.69
CCM2-213ENST00000480658 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.73□□□□□ -0.69
CCM2-213ENST00000480658 COPS7AQ9UBW8 275 aa10.73□□□□□ -0.69
CCM2-213ENST00000480658 IKZF3Q9UKT9 509 aa10.73□□□□□ -0.69
CCM2-213ENST00000480658 DAPP1Q9UN19 280 aa10.73□□□□□ -0.69
CCM2-213ENST00000480658 PCDHGA11Q9Y5H2 935 aa10.73□□□□□ -0.69
CCM2-213ENST00000480658 CCDC88CQ9P219 2028 aa10.72□□□□□ -0.69
CCM2-213ENST00000480658 CXorf49A8MYA2 514 aaPredicted RBP10.72□□□□□ -0.69
CCM2-213ENST00000480658 SLC25A12O75746 678 aa10.72□□□□□ -0.69
CCM2-213ENST00000480658 CELA2AP08217 269 aa10.72□□□□□ -0.69
CCM2-213ENST00000480658 INHBAP08476 426 aa10.72□□□□□ -0.69
CCM2-213ENST00000480658 GFAPP14136 432 aa10.72□□□□□ -0.69
CCM2-213ENST00000480658 TLX1P31314 330 aaPredicted RBP10.72□□□□□ -0.69
CCM2-213ENST00000480658 PIK3CBP42338 1070 aa10.72□□□□□ -0.69
CCM2-213ENST00000480658 GDF5P43026 501 aa10.72□□□□□ -0.69
CCM2-213ENST00000480658 SERPINB9P50453 376 aa10.72□□□□□ -0.69
CCM2-213ENST00000480658 EFNA3P52797 238 aa10.72□□□□□ -0.69
CCM2-213ENST00000480658 ALDH18A1P54886 795 aaKnown RBP10.72□□□□□ -0.69
CCM2-213ENST00000480658 GPX6P59796 221 aa10.72□□□□□ -0.69
CCM2-213ENST00000480658 OLR1P78380 273 aa10.72□□□□□ -0.69
CCM2-213ENST00000480658 ALDH6A1Q02252 535 aaKnown RBP10.72□□□□□ -0.69
CCM2-213ENST00000480658 TBL3Q12788 808 aaKnown RBP10.72□□□□□ -0.69
CCM2-213ENST00000480658 STX4Q12846 297 aa10.72□□□□□ -0.69
CCM2-213ENST00000480658 CHIT1Q13231 466 aa10.72□□□□□ -0.69
CCM2-213ENST00000480658 DOC2AQ14183 400 aa10.72□□□□□ -0.69
CCM2-213ENST00000480658 OR4D1Q15615 310 aa10.72□□□□□ -0.69
CCM2-213ENST00000480658 TSNAXIP1Q2TAA8 658 aa10.72□□□□□ -0.69
CCM2-213ENST00000480658 AP5B1Q2VPB7 878 aa10.72□□□□□ -0.69
CCM2-213ENST00000480658 LGSNQ5TDP6 509 aa10.72□□□□□ -0.69
CCM2-213ENST00000480658 LIPJQ5W064 366 aa10.72□□□□□ -0.69
CCM2-213ENST00000480658 GRHL2Q6ISB3 625 aa10.72□□□□□ -0.69
CCM2-213ENST00000480658 SLC25A25Q6KCM7 469 aa10.72□□□□□ -0.69
CCM2-213ENST00000480658 ABHD17CQ6PCB6 329 aa10.72□□□□□ -0.69
CCM2-213ENST00000480658 ISCA2Q86U28 154 aa10.72□□□□□ -0.69
CCM2-213ENST00000480658 LAS2Q8IYD9 372 aa10.72□□□□□ -0.69
CCM2-213ENST00000480658 MDS2Q8NDY4 140 aa10.72□□□□□ -0.69
CCM2-213ENST00000480658 OR5L2Q8NGL0 311 aa10.72□□□□□ -0.69
CCM2-213ENST00000480658 OR8K3Q8NH51 312 aa10.72□□□□□ -0.69
CCM2-213ENST00000480658 FMO2Q99518 471 aa10.72□□□□□ -0.69
CCM2-213ENST00000480658 PELOQ9BRX2 385 aaKnown RBP10.72□□□□□ -0.69
CCM2-213ENST00000480658 ALG9Q9H6U8 611 aa10.72□□□□□ -0.69
CCM2-213ENST00000480658 PHF11Q9UIL8 331 aa10.72□□□□□ -0.69
CCM2-213ENST00000480658 CLCA3PQ9Y6N3 262 aa10.72□□□□□ -0.69
CCM2-213ENST00000480658 USP9YO00507 2555 aaPredicted RBP10.71□□□□□ -0.69
CCM2-213ENST00000480658 TAPBPO15533 448 aa10.71□□□□□ -0.69
CCM2-213ENST00000480658 NME2P1O60361 137 aa10.71□□□□□ -0.69
CCM2-213ENST00000480658 CTNSO60931 367 aa10.71□□□□□ -0.69
CCM2-213ENST00000480658 KRT38O76015 456 aa10.71□□□□□ -0.69
CCM2-213ENST00000480658 ZFAND5O76080 213 aa10.71□□□□□ -0.69
CCM2-213ENST00000480658 URI1O94763 535 aaPredicted RBP10.71□□□□□ -0.69
CCM2-213ENST00000480658 MYO1DO94832 1006 aa10.71□□□□□ -0.69
CCM2-213ENST00000480658 SCELO95171 688 aa10.71□□□□□ -0.69
CCM2-213ENST00000480658 UNC5CO95185 931 aa10.71□□□□□ -0.69
CCM2-213ENST00000480658 KLHL2O95198 593 aa10.71□□□□□ -0.69
CCM2-213ENST00000480658 SP1P08047 785 aa10.71□□□□□ -0.69
CCM2-213ENST00000480658 RBP1P09455 135 aa10.71□□□□□ -0.69
CCM2-213ENST00000480658 ZNF24P17028 368 aa10.71□□□□□ -0.69
CCM2-213ENST00000480658 AGAP20933 346 aa10.71□□□□□ -0.69
CCM2-213ENST00000480658 MAOAP21397 527 aa10.71□□□□□ -0.69
CCM2-213ENST00000480658 NME2P22392 152 aa10.71□□□□□ -0.69
CCM2-213ENST00000480658 TYK2P29597 1187 aa10.71□□□□□ -0.69
CCM2-213ENST00000480658 HNRNPH1P31943 449 aaKnown RBP10.71□□□□□ -0.69
CCM2-213ENST00000480658 CD96P40200 585 aa10.71□□□□□ -0.69
CCM2-213ENST00000480658 BUD31P41223 144 aaPredicted RBP10.71□□□□□ -0.69
CCM2-213ENST00000480658 MSH2P43246 934 aa10.71□□□□□ -0.69
CCM2-213ENST00000480658 HLCSP50747 726 aa10.71□□□□□ -0.69
CCM2-213ENST00000480658 RAP1GDS1P52306 607 aa10.71□□□□□ -0.69
CCM2-213ENST00000480658 PGGT1BP53609 377 aa10.71□□□□□ -0.69
CCM2-213ENST00000480658 PLA2G16P53816 162 aa10.71□□□□□ -0.69
CCM2-213ENST00000480658 LIM2P55344 173 aa10.71□□□□□ -0.69
CCM2-213ENST00000480658 MLF1P58340 268 aa10.71□□□□□ -0.69
CCM2-213ENST00000480658 NAA30Q147X3 362 aaPredicted RBP10.71□□□□□ -0.69
CCM2-213ENST00000480658 ZRSR2Q15696 482 aaKnown RBP10.71□□□□□ -0.69
CCM2-213ENST00000480658 ZDHHC24Q6UX98 284 aa10.71□□□□□ -0.69
CCM2-213ENST00000480658 LCA5Q86VQ0 697 aa10.71□□□□□ -0.69
CCM2-213ENST00000480658 DND1Q8IYX4 353 aaKnown RBP10.71□□□□□ -0.69
CCM2-213ENST00000480658 GHDCQ8N2G8 530 aa10.71□□□□□ -0.69
CCM2-213ENST00000480658 TMEM156Q8N614 296 aa10.71□□□□□ -0.69
CCM2-213ENST00000480658 MORN4Q8NDC4 146 aa10.71□□□□□ -0.69
CCM2-213ENST00000480658 USP9XQ93008 2570 aaPredicted RBP10.71□□□□□ -0.69
CCM2-213ENST00000480658 EXT2Q93063 718 aa10.71□□□□□ -0.69
CCM2-213ENST00000480658 GPR137Q96N19 417 aa10.71□□□□□ -0.69
CCM2-213ENST00000480658 TAAR6Q96RI8 345 aa10.71□□□□□ -0.69
CCM2-213ENST00000480658 ATOH8Q96SQ7 321 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms