RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 AICDAQ9GZX7 198 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 ING2Q9H160 280 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 RHBGQ9H310 441 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 OR51B5Q9H339 312 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 ELOVL6Q9H5J4 265 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 ZNF395Q9H8N7 513 aaPredicted RBP8.58□□□□□ -1.04
VCP-206ENST00000480327 TNFRSF12AQ9NP84 129 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 FARSBQ9NSD9 589 aaKnown RBP8.58□□□□□ -1.04
VCP-206ENST00000480327 TRPS1Q9UHF7 1281 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 VPS4AQ9UN37 437 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 SRPK3Q9UPE1 567 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 FARSAQ9Y285 508 aaKnown RBP8.58□□□□□ -1.04
VCP-206ENST00000480327 PCDHGA11Q9Y5H2 935 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 APCP25054 2843 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 CREBBPQ92793 2442 aa8.58□□□□□ -1.04
VCP-206ENST00000480327 A1L4Q6 167 aa8.57□□□□□ -1.04
VCP-206ENST00000480327 MAGEB17A8MXT2 336 aa8.57□□□□□ -1.04
VCP-206ENST00000480327 H0YIV9 168 aa8.57□□□□□ -1.04
VCP-206ENST00000480327 MANBAO00462 879 aa8.57□□□□□ -1.04
VCP-206ENST00000480327 DYNC1I1O14576 645 aa8.57□□□□□ -1.04
VCP-206ENST00000480327 BIRC5O15392 142 aa8.57□□□□□ -1.04
VCP-206ENST00000480327 ERI3O43414 337 aaKnown RBP8.57□□□□□ -1.04
VCP-206ENST00000480327 FOXS1O43638 330 aa8.57□□□□□ -1.04
VCP-206ENST00000480327 ITM2AO43736 263 aa8.57□□□□□ -1.04
VCP-206ENST00000480327 NPHS1O60500 1241 aa8.57□□□□□ -1.04
VCP-206ENST00000480327 CLEC3AO75596 197 aa8.57□□□□□ -1.04
VCP-206ENST00000480327 HSPA4LO95757 839 aa8.57□□□□□ -1.04
VCP-206ENST00000480327 CLDN1O95832 211 aa8.57□□□□□ -1.04
VCP-206ENST00000480327 TBX6O95947 436 aaPredicted RBP8.57□□□□□ -1.04
VCP-206ENST00000480327 PDYNP01213 254 aa8.57□□□□□ -1.04
VCP-206ENST00000480327 SERPINA6P08185 405 aa8.57□□□□□ -1.04
VCP-206ENST00000480327 DHRS4L1P0CG22 281 aa8.57□□□□□ -1.04
VCP-206ENST00000480327 ITGAXP20702 1163 aa8.57□□□□□ -1.04
VCP-206ENST00000480327 AGXTP21549 392 aa8.57□□□□□ -1.04
VCP-206ENST00000480327 ARRB2P32121 409 aa8.57□□□□□ -1.04
VCP-206ENST00000480327 GCGRP47871 477 aa8.57□□□□□ -1.04
VCP-206ENST00000480327 HTR6P50406 440 aa8.57□□□□□ -1.04
VCP-206ENST00000480327 PLA2G16P53816 162 aa8.57□□□□□ -1.04
VCP-206ENST00000480327 PKNOX1P55347 436 aa8.57□□□□□ -1.04
VCP-206ENST00000480327 FOXL2P58012 376 aa8.57□□□□□ -1.04
VCP-206ENST00000480327 PPP2R2AP63151 447 aa8.57□□□□□ -1.04
VCP-206ENST00000480327 OLR1P78380 273 aa8.57□□□□□ -1.04
VCP-206ENST00000480327 BTN3A2P78410 334 aa8.57□□□□□ -1.04
VCP-206ENST00000480327 DCDP81605 110 aaKnown RBP8.57□□□□□ -1.04
VCP-206ENST00000480327 MAT1AQ00266 395 aaKnown RBP8.57□□□□□ -1.04
VCP-206ENST00000480327 PWP1Q13610 501 aa8.57□□□□□ -1.04
VCP-206ENST00000480327 RCN2Q14257 317 aa8.57□□□□□ -1.04
VCP-206ENST00000480327 INPP5JQ15735 1006 aaPredicted RBP8.57□□□□□ -1.04
VCP-206ENST00000480327 SYT16Q17RD7 645 aa8.57□□□□□ -1.04
VCP-206ENST00000480327 EIF2S3LQ2VIR3 472 aaKnown RBP8.57□□□□□ -1.04
VCP-206ENST00000480327 GGTA1PQ4G0N0 100 aa8.57□□□□□ -1.04
VCP-206ENST00000480327 NKAIN1Q4KMZ8 207 aa8.57□□□□□ -1.04
VCP-206ENST00000480327 DEFB134Q4QY38 66 aa8.57□□□□□ -1.04
VCP-206ENST00000480327 ARL13AQ5H913 290 aaPredicted RBP8.57□□□□□ -1.04
VCP-206ENST00000480327 GARNL3Q5VVW2 1013 aa8.57□□□□□ -1.04
VCP-206ENST00000480327 FRG2Q64ET8 278 aa8.57□□□□□ -1.04
VCP-206ENST00000480327 ZNF787Q6DD87 383 aa8.57□□□□□ -1.04
VCP-206ENST00000480327 CLEC6AQ6EIG7 209 aa8.57□□□□□ -1.04
VCP-206ENST00000480327 JMJD6Q6NYC1 403 aaPredicted RBP8.57□□□□□ -1.04
VCP-206ENST00000480327 FAM198BQ6UWH4 519 aa8.57□□□□□ -1.04
VCP-206ENST00000480327 SHISA6Q6ZSJ9 500 aa8.57□□□□□ -1.04
VCP-206ENST00000480327 CUZD1Q86UP6 607 aa8.57□□□□□ -1.04
VCP-206ENST00000480327 ARHGEF39Q8N4T4 335 aa8.57□□□□□ -1.04
VCP-206ENST00000480327 ENDOVQ8N8Q3 282 aaKnown RBP8.57□□□□□ -1.04
VCP-206ENST00000480327 WDR20Q8TBZ3 569 aa8.57□□□□□ -1.04
VCP-206ENST00000480327 UTP15Q8TED0 518 aaKnown RBP8.57□□□□□ -1.04
VCP-206ENST00000480327 SELENOMQ8WWX9 145 aa8.57□□□□□ -1.04
VCP-206ENST00000480327 REPS1Q96D71 796 aa8.57□□□□□ -1.04
VCP-206ENST00000480327 C19orf60Q96EN9 201 aa8.57□□□□□ -1.04
VCP-206ENST00000480327 CNDP1Q96KN2 507 aa8.57□□□□□ -1.04
VCP-206ENST00000480327 LRFN5Q96NI6 719 aa8.57□□□□□ -1.04
VCP-206ENST00000480327 GBP5Q96PP8 586 aa8.57□□□□□ -1.04
VCP-206ENST00000480327 FRG2BQ96QU4 278 aa8.57□□□□□ -1.04
VCP-206ENST00000480327 MFRPQ9BY79 579 aa8.57□□□□□ -1.04
VCP-206ENST00000480327 SLC6A16Q9GZN6 736 aa8.57□□□□□ -1.04
VCP-206ENST00000480327 REXO4Q9GZR2 422 aaKnown RBP8.57□□□□□ -1.04
VCP-206ENST00000480327 ANKHQ9HCJ1 492 aa8.57□□□□□ -1.04
VCP-206ENST00000480327 ZNF304Q9HCX3 659 aa8.57□□□□□ -1.04
VCP-206ENST00000480327 DMRT3Q9NQL9 472 aa8.57□□□□□ -1.04
VCP-206ENST00000480327 HCN3Q9P1Z3 774 aa8.57□□□□□ -1.04
VCP-206ENST00000480327 IFT80Q9P2H3 777 aaPredicted RBP8.57□□□□□ -1.04
VCP-206ENST00000480327 SNX6Q9UNH7 406 aa8.57□□□□□ -1.04
VCP-206ENST00000480327 STK38LQ9Y2H1 464 aa8.57□□□□□ -1.04
VCP-206ENST00000480327 NAALAD2Q9Y3Q0 740 aa8.57□□□□□ -1.04
VCP-206ENST00000480327 ZGRF1Q86YA3 2104 aa8.57□□□□□ -1.04
VCP-206ENST00000480327 PDZD2O15018 2839 aa8.57□□□□□ -1.04
VCP-206ENST00000480327 OTOGQ6ZRI0 2925 aa8.57□□□□□ -1.04
VCP-206ENST00000480327 FBN2P35556 2912 aa8.56□□□□□ -1.04
VCP-206ENST00000480327 LRIT2A6NDA9 550 aa8.56□□□□□ -1.04
VCP-206ENST00000480327 WIPF3A6NGB9 483 aa8.56□□□□□ -1.04
VCP-206ENST00000480327 TMEM233B4DJY2 109 aa8.56□□□□□ -1.04
VCP-206ENST00000480327 RTCAO00442 366 aaKnown RBP8.56□□□□□ -1.04
VCP-206ENST00000480327 DNAJB6O75190 326 aa8.56□□□□□ -1.04
VCP-206ENST00000480327 RDH16O75452 317 aa8.56□□□□□ -1.04
VCP-206ENST00000480327 KLHL18O94889 574 aa8.56□□□□□ -1.04
VCP-206ENST00000480327 ETHE1O95571 254 aa8.56□□□□□ -1.04
VCP-206ENST00000480327 ESRRBO95718 433 aa8.56□□□□□ -1.04
VCP-206ENST00000480327 KRT6AP02538 564 aa8.56□□□□□ -1.04
VCP-206ENST00000480327 KRT6BP04259 564 aa8.56□□□□□ -1.04
VCP-206ENST00000480327 SERPINE1P05121 402 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms