RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 ATXN8OSP0DMR3 200 aa18.64■□□□□ 0.57
LIME1-205ENST00000480139 RNH1P13489 461 aaKnown RBP18.64■□□□□ 0.57
LIME1-205ENST00000480139 ATP5A1P25705 553 aaKnown RBP18.64■□□□□ 0.57
LIME1-205ENST00000480139 CERS1P27544 350 aa18.64■□□□□ 0.57
LIME1-205ENST00000480139 SSR2P43308 183 aa18.64■□□□□ 0.57
LIME1-205ENST00000480139 CHI3L2Q15782 390 aa18.64■□□□□ 0.57
LIME1-205ENST00000480139 SGO1Q5FBB7 561 aa18.64■□□□□ 0.57
LIME1-205ENST00000480139 ZNF793Q6ZN11 406 aa18.64■□□□□ 0.57
LIME1-205ENST00000480139 RAB43Q86YS6 212 aa18.64■□□□□ 0.57
LIME1-205ENST00000480139 CA13Q8N1Q1 262 aa18.64■□□□□ 0.57
LIME1-205ENST00000480139 ZCCHC7Q8N3Z6 543 aaKnown RBP18.64■□□□□ 0.57
LIME1-205ENST00000480139 ACOT4Q8N9L9 421 aa18.64■□□□□ 0.57
LIME1-205ENST00000480139 THAP4Q8WY91 577 aa18.64■□□□□ 0.57
LIME1-205ENST00000480139 CATSPER2Q96P56 530 aa18.64■□□□□ 0.57
LIME1-205ENST00000480139 SOX17Q9H6I2 414 aaPredicted RBP18.64■□□□□ 0.57
LIME1-205ENST00000480139 LYRM4Q9HD34 91 aa18.64■□□□□ 0.57
LIME1-205ENST00000480139 TNFRSF12AQ9NP84 129 aa18.64■□□□□ 0.57
LIME1-205ENST00000480139 AHSPQ9NZD4 102 aa18.64■□□□□ 0.57
LIME1-205ENST00000480139 ADAM29Q9UKF5 820 aa18.64■□□□□ 0.57
LIME1-205ENST00000480139 TIMM22Q9Y584 194 aa18.64■□□□□ 0.57
LIME1-205ENST00000480139 DSPP15924 2871 aaKnown RBP18.64■□□□□ 0.57
LIME1-205ENST00000480139 WDR91A4D1P6 747 aa18.63■□□□□ 0.57
LIME1-205ENST00000480139 SAP18O00422 153 aaKnown RBP18.63■□□□□ 0.57
LIME1-205ENST00000480139 ATP8B1O43520 1251 aa18.63■□□□□ 0.57
LIME1-205ENST00000480139 SH3BGRLO75368 114 aa18.63■□□□□ 0.57
LIME1-205ENST00000480139 FHP07954 510 aa18.63■□□□□ 0.57
LIME1-205ENST00000480139 JAK1P23458 1154 aa18.63■□□□□ 0.57
LIME1-205ENST00000480139 MMP11P24347 488 aa18.63■□□□□ 0.57
LIME1-205ENST00000480139 ARRB2P32121 409 aa18.63■□□□□ 0.57
LIME1-205ENST00000480139 BSGP35613 385 aa18.63■□□□□ 0.57
LIME1-205ENST00000480139 HTR6P50406 440 aa18.63■□□□□ 0.57
LIME1-205ENST00000480139 OLR1P78380 273 aa18.63■□□□□ 0.57
LIME1-205ENST00000480139 RUNX2Q13950 521 aa18.63■□□□□ 0.57
LIME1-205ENST00000480139 ERV3-1Q14264 604 aa18.63■□□□□ 0.57
LIME1-205ENST00000480139 ABRAXAS2Q15018 415 aa18.63■□□□□ 0.57
LIME1-205ENST00000480139 TUBB8Q3ZCM7 444 aa18.63■□□□□ 0.57
LIME1-205ENST00000480139 FAM69BQ5VUD6 431 aa18.63■□□□□ 0.57
LIME1-205ENST00000480139 KANK2Q63ZY3 851 aa18.63■□□□□ 0.57
LIME1-205ENST00000480139 NUDT13Q86X67 352 aa18.63■□□□□ 0.57
LIME1-205ENST00000480139 RAB3IL1Q8TBN0 382 aa18.63■□□□□ 0.57
LIME1-205ENST00000480139 TBC1D20Q96BZ9 403 aa18.63■□□□□ 0.57
LIME1-205ENST00000480139 PEX11GQ96HA9 241 aa18.63■□□□□ 0.57
LIME1-205ENST00000480139 CRB3Q9BUF7 120 aa18.63■□□□□ 0.57
LIME1-205ENST00000480139 SHCBP1LQ9BZQ2 653 aa18.63■□□□□ 0.57
LIME1-205ENST00000480139 DDX31Q9H8H2 851 aaKnown RBP18.63■□□□□ 0.57
LIME1-205ENST00000480139 MLXIPLQ9NP71 852 aa18.63■□□□□ 0.57
LIME1-205ENST00000480139 LANCL2Q9NS86 450 aa18.63■□□□□ 0.57
LIME1-205ENST00000480139 VPS29Q9UBQ0 182 aa18.63■□□□□ 0.57
LIME1-205ENST00000480139 DAPP1Q9UN19 280 aa18.63■□□□□ 0.57
LIME1-205ENST00000480139 SLC12A4Q9UP95 1085 aa18.63■□□□□ 0.57
LIME1-205ENST00000480139 KMT2BQ9UMN6 2715 aaPredicted RBP18.62■□□□□ 0.57
LIME1-205ENST00000480139 IDSB3KWA1 339 aa18.62■□□□□ 0.57
LIME1-205ENST00000480139 RTCAO00442 366 aaKnown RBP18.62■□□□□ 0.57
LIME1-205ENST00000480139 DNAJB6O75190 326 aa18.62■□□□□ 0.57
LIME1-205ENST00000480139 LIM2P55344 173 aa18.62■□□□□ 0.57
LIME1-205ENST00000480139 RAB38P57729 211 aa18.62■□□□□ 0.57
LIME1-205ENST00000480139 TBL3Q12788 808 aaKnown RBP18.62■□□□□ 0.57
LIME1-205ENST00000480139 COL28A1Q2UY09 1125 aa18.62■□□□□ 0.57
LIME1-205ENST00000480139 CES4AQ5XG92 561 aa18.62■□□□□ 0.57
LIME1-205ENST00000480139 SHISA6Q6ZSJ9 500 aa18.62■□□□□ 0.57
LIME1-205ENST00000480139 TRIM46Q7Z4K8 759 aa18.62■□□□□ 0.57
LIME1-205ENST00000480139 LAPTM4BQ86VI4 370 aa18.62■□□□□ 0.57
LIME1-205ENST00000480139 METTL4Q8N3J2 472 aa18.62■□□□□ 0.57
LIME1-205ENST00000480139 PAIP2Q9BPZ3 127 aaKnown RBP18.62■□□□□ 0.57
LIME1-205ENST00000480139 ACPTQ9BZG2 426 aa18.62■□□□□ 0.57
LIME1-205ENST00000480139 C3orf18Q9UK00 162 aa18.62■□□□□ 0.57
LIME1-205ENST00000480139 POLHQ9Y253 713 aa18.62■□□□□ 0.57
LIME1-205ENST00000480139 ITPR1Q14643 2758 aa18.61■□□□□ 0.57
LIME1-205ENST00000480139 A0A0A6YYD5 115 aa18.61■□□□□ 0.57
LIME1-205ENST00000480139 A0A1W2PQ72 361 aa18.61■□□□□ 0.57
LIME1-205ENST00000480139 CDC14CA4D256 554 aa18.61■□□□□ 0.57
LIME1-205ENST00000480139 PSMD12O00232 456 aaPredicted RBP18.61■□□□□ 0.57
LIME1-205ENST00000480139 HSPA4LO95757 839 aa18.61■□□□□ 0.57
LIME1-205ENST00000480139 CHEK2O96017 543 aa18.61■□□□□ 0.57
LIME1-205ENST00000480139 FURINP09958 794 aa18.61■□□□□ 0.57
LIME1-205ENST00000480139 PRKAR1AP10644 381 aa18.61■□□□□ 0.57
LIME1-205ENST00000480139 NEFHP12036 1026 aa18.61■□□□□ 0.57
LIME1-205ENST00000480139 BGNP21810 368 aa18.61■□□□□ 0.57
LIME1-205ENST00000480139 EMP2P54851 167 aa18.61■□□□□ 0.57
LIME1-205ENST00000480139 FOXL2P58012 376 aa18.61■□□□□ 0.57
LIME1-205ENST00000480139 ABCE1P61221 599 aaKnown RBP18.61■□□□□ 0.57
LIME1-205ENST00000480139 FAM219BQ5XKK7 198 aa18.61■□□□□ 0.57
LIME1-205ENST00000480139 CLEC6AQ6EIG7 209 aa18.61■□□□□ 0.57
LIME1-205ENST00000480139 ATG14Q6ZNE5 492 aa18.61■□□□□ 0.57
LIME1-205ENST00000480139 PAGE2Q7Z2X7 111 aa18.61■□□□□ 0.57
LIME1-205ENST00000480139 GPR155Q7Z3F1 870 aa18.61■□□□□ 0.57
LIME1-205ENST00000480139 PPP1R32Q7Z5V6 425 aa18.61■□□□□ 0.57
LIME1-205ENST00000480139 TMEM151BQ8IW70 566 aa18.61■□□□□ 0.57
LIME1-205ENST00000480139 TRIM42Q8IWZ5 723 aa18.61■□□□□ 0.57
LIME1-205ENST00000480139 KIRREL3Q8IZU9 778 aa18.61■□□□□ 0.57
LIME1-205ENST00000480139 CLYBLQ8N0X4 340 aa18.61■□□□□ 0.57
LIME1-205ENST00000480139 SHISA5Q8N114 240 aa18.61■□□□□ 0.57
LIME1-205ENST00000480139 MGARPQ8TDB4 240 aa18.61■□□□□ 0.57
LIME1-205ENST00000480139 HBEGFQ99075 208 aa18.61■□□□□ 0.57
LIME1-205ENST00000480139 MRPL1Q9BYD6 325 aaKnown RBP18.61■□□□□ 0.57
LIME1-205ENST00000480139 VN1R1Q9GZP7 353 aa18.61■□□□□ 0.57
LIME1-205ENST00000480139 MS4A12Q9NXJ0 267 aa18.61■□□□□ 0.57
LIME1-205ENST00000480139 KCMF1Q9P0J7 381 aa18.61■□□□□ 0.57
LIME1-205ENST00000480139 MKL2Q9ULH7 1088 aa18.61■□□□□ 0.57
LIME1-205ENST00000480139 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms