RNA–Protein interactions for RNA: ENST00000479544.6

USP42-206, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 1 (best)

Gene USP42, Length 4,286 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-206ENST00000479544 CLDN8P56748 225 aa13□□□□□ -0.33
USP42-206ENST00000479544 PGBD2Q6P3X8 592 aa13□□□□□ -0.33
USP42-206ENST00000479544 ZNF280BQ86YH2 543 aa13□□□□□ -0.33
USP42-206ENST00000479544 TOMM5Q8N4H5 51 aa13□□□□□ -0.33
USP42-206ENST00000479544 ASB15Q8WXK1 588 aa13□□□□□ -0.33
USP42-206ENST00000479544 TARM1B6A8C7 271 aa13□□□□□ -0.33
USP42-206ENST00000479544 HCN1O60741 890 aa13□□□□□ -0.33
USP42-206ENST00000479544 GJB5O95377 273 aa13□□□□□ -0.33
USP42-206ENST00000479544 EPOP01588 193 aa13□□□□□ -0.33
USP42-206ENST00000479544 PTGER1P34995 402 aa13□□□□□ -0.33
USP42-206ENST00000479544 GPR1P46091 355 aa13□□□□□ -0.33
USP42-206ENST00000479544 TGM4P49221 684 aa13□□□□□ -0.33
USP42-206ENST00000479544 RHAGQ02094 409 aa13□□□□□ -0.33
USP42-206ENST00000479544 FLYWCH1Q4VC44 716 aa13□□□□□ -0.33
USP42-206ENST00000479544 ANKRD54Q6NXT1 300 aa13□□□□□ -0.33
USP42-206ENST00000479544 TMEM220Q6QAJ8 160 aa13□□□□□ -0.33
USP42-206ENST00000479544 B3GLCTQ6Y288 498 aa13□□□□□ -0.33
USP42-206ENST00000479544 AGMOQ6ZNB7 445 aa13□□□□□ -0.33
USP42-206ENST00000479544 BCDIN3DQ7Z5W3 292 aaKnown RBP13□□□□□ -0.33
USP42-206ENST00000479544 SCD5Q86SK9 330 aa13□□□□□ -0.33
USP42-206ENST00000479544 COQ8AQ8NI60 647 aa13□□□□□ -0.33
USP42-206ENST00000479544 ZBED3Q96IU2 234 aaPredicted RBP13□□□□□ -0.33
USP42-206ENST00000479544 TM9SF2Q99805 663 aa13□□□□□ -0.33
USP42-206ENST00000479544 TMEM30AQ9NV96 361 aa13□□□□□ -0.33
USP42-206ENST00000479544 C5AR2Q9P296 337 aa13□□□□□ -0.33
USP42-206ENST00000479544 KIAA1551Q9HCM1 1747 aa13□□□□□ -0.33
USP42-206ENST00000479544 FXYD6-FXYD2A0A087WZ82 144 aa13□□□□□ -0.33
USP42-206ENST00000479544 CRISP1P54107 249 aa13□□□□□ -0.33
USP42-206ENST00000479544 TATDN3Q17R31 274 aa13□□□□□ -0.33
USP42-206ENST00000479544 FAM92BQ6ZTR7 304 aa13□□□□□ -0.33
USP42-206ENST00000479544 TBC1D19Q8N5T2 526 aa13□□□□□ -0.33
USP42-206ENST00000479544 MDGA1Q8NFP4 955 aa13□□□□□ -0.33
USP42-206ENST00000479544 PSKH2Q96QS6 385 aa13□□□□□ -0.33
USP42-206ENST00000479544 FXYD6Q9H0Q3 95 aa13□□□□□ -0.33
USP42-206ENST00000479544 MAN2B2Q9Y2E5 1009 aa13□□□□□ -0.33
USP42-206ENST00000479544 GFRA2O00451 464 aa12.99□□□□□ -0.33
USP42-206ENST00000479544 MUSKO15146 869 aa12.99□□□□□ -0.33
USP42-206ENST00000479544 SCO1O75880 301 aa12.99□□□□□ -0.33
USP42-206ENST00000479544 OR7A10O76100 309 aa12.99□□□□□ -0.33
USP42-206ENST00000479544 CPNE6O95741 557 aa12.99□□□□□ -0.33
USP42-206ENST00000479544 PLATP00750 562 aa12.99□□□□□ -0.33
USP42-206ENST00000479544 GJA1P17302 382 aa12.99□□□□□ -0.33
USP42-206ENST00000479544 EVI2BP34910 448 aa12.99□□□□□ -0.33
USP42-206ENST00000479544 GTF2IRD2BQ6EKJ0 949 aa12.99□□□□□ -0.33
USP42-206ENST00000479544 HSDL2Q6YN16 418 aa12.99□□□□□ -0.33
USP42-206ENST00000479544 GTF2IRD2Q86UP8 949 aa12.99□□□□□ -0.33
USP42-206ENST00000479544 UHRF1Q96T88 793 aaPredicted RBP12.99□□□□□ -0.33
USP42-206ENST00000479544 SPG21Q9NZD8 308 aa12.99□□□□□ -0.33
USP42-206ENST00000479544 MGAT4AQ9UM21 535 aa12.99□□□□□ -0.33
USP42-206ENST00000479544 RABL2BQ9UNT1 228 aa12.99□□□□□ -0.33
USP42-206ENST00000479544 COL2A1P02458 1487 aaPredicted RBP12.99□□□□□ -0.33
USP42-206ENST00000479544 A0A075B6Q4 140 aa12.99□□□□□ -0.33
USP42-206ENST00000479544 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.99□□□□□ -0.33
USP42-206ENST00000479544 IFNA7P01567 189 aa12.99□□□□□ -0.33
USP42-206ENST00000479544 CDH11P55287 796 aa12.99□□□□□ -0.33
USP42-206ENST00000479544 FBXW4P57775 412 aa12.99□□□□□ -0.33
USP42-206ENST00000479544 TSPAN5P62079 268 aa12.99□□□□□ -0.33
USP42-206ENST00000479544 SLAMF1Q13291 335 aa12.99□□□□□ -0.33
USP42-206ENST00000479544 OTOP2Q7RTS6 562 aa12.99□□□□□ -0.33
USP42-206ENST00000479544 ZNF367Q7RTV3 350 aa12.99□□□□□ -0.33
USP42-206ENST00000479544 ZNF438Q7Z4V0 828 aa12.99□□□□□ -0.33
USP42-206ENST00000479544 OR51G2Q8NGK0 314 aa12.99□□□□□ -0.33
USP42-206ENST00000479544 SOCS4Q8WXH5 440 aa12.99□□□□□ -0.33
USP42-206ENST00000479544 BRI3BPQ8WY22 251 aa12.99□□□□□ -0.33
USP42-206ENST00000479544 PMEPA1Q969W9 287 aa12.99□□□□□ -0.33
USP42-206ENST00000479544 MAPKAP1Q9BPZ7 522 aa12.99□□□□□ -0.33
USP42-206ENST00000479544 FUZQ9BT04 418 aa12.99□□□□□ -0.33
USP42-206ENST00000479544 SLC29A3Q9BZD2 475 aa12.99□□□□□ -0.33
USP42-206ENST00000479544 GORASP2Q9H8Y8 452 aa12.99□□□□□ -0.33
USP42-206ENST00000479544 CFAP97Q9P2B7 532 aa12.99□□□□□ -0.33
USP42-206ENST00000479544 GRIP1Q9Y3R0 1128 aa12.99□□□□□ -0.33
USP42-206ENST00000479544 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.99□□□□□ -0.33
USP42-206ENST00000479544 RTCAO00442 366 aaKnown RBP12.99□□□□□ -0.33
USP42-206ENST00000479544 TEX28O15482 410 aa12.99□□□□□ -0.33
USP42-206ENST00000479544 SDC1P18827 310 aa12.99□□□□□ -0.33
USP42-206ENST00000479544 STOMP27105 288 aa12.99□□□□□ -0.33
USP42-206ENST00000479544 SP3Q02447 781 aa12.99□□□□□ -0.33
USP42-206ENST00000479544 NFATC2Q13469 925 aa12.99□□□□□ -0.33
USP42-206ENST00000479544 THOC6Q86W42 341 aaKnown RBP12.99□□□□□ -0.33
USP42-206ENST00000479544 UROC1Q96N76 676 aa12.99□□□□□ -0.33
USP42-206ENST00000479544 DIABLOQ9NR28 239 aa12.99□□□□□ -0.33
USP42-206ENST00000479544 ENTPD6O75354 484 aa12.99□□□□□ -0.33
USP42-206ENST00000479544 DNASE1P24855 282 aa12.99□□□□□ -0.33
USP42-206ENST00000479544 GABRR2P28476 465 aa12.99□□□□□ -0.33
USP42-206ENST00000479544 STAT5AP42229 794 aa12.99□□□□□ -0.33
USP42-206ENST00000479544 CBLBQ13191 982 aa12.99□□□□□ -0.33
USP42-206ENST00000479544 ZNF791Q3KP31 576 aaPredicted RBP12.99□□□□□ -0.33
USP42-206ENST00000479544 XAF1Q6GPH4 301 aa12.99□□□□□ -0.33
USP42-206ENST00000479544 DHRS4L2Q6PKH6 230 aa12.99□□□□□ -0.33
USP42-206ENST00000479544 AGTRAPQ6RW13 159 aa12.99□□□□□ -0.33
USP42-206ENST00000479544 RFPL4BQ6ZWI9 263 aa12.99□□□□□ -0.33
USP42-206ENST00000479544 VWA5B2Q8N398 1253 aa12.99□□□□□ -0.33
USP42-206ENST00000479544 DNAJB8Q8NHS0 232 aa12.99□□□□□ -0.33
USP42-206ENST00000479544 CMTM7Q96FZ5 175 aa12.99□□□□□ -0.33
USP42-206ENST00000479544 POPDC3Q9HBV1 291 aa12.99□□□□□ -0.33
USP42-206ENST00000479544 FBXW2Q9UKT8 454 aa12.99□□□□□ -0.33
USP42-206ENST00000479544 DAPL1A0PJW8 107 aa12.98□□□□□ -0.33
USP42-206ENST00000479544 E2F3O00716 465 aa12.98□□□□□ -0.33
USP42-206ENST00000479544 PCDH17O14917 1159 aa12.98□□□□□ -0.33
USP42-206ENST00000479544 APOC3P02656 99 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms