RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 UNC5CO95185 931 aa5.93□□□□□ -1.46
SF3B1-209ENST00000479532 WISP3O95389 354 aaPredicted RBP5.93□□□□□ -1.46
SF3B1-209ENST00000479532 GUCA1CO95843 209 aa5.93□□□□□ -1.46
SF3B1-209ENST00000479532 TSPAN12O95859 305 aa5.93□□□□□ -1.46
SF3B1-209ENST00000479532 MT-CO3P00414 261 aa5.93□□□□□ -1.46
SF3B1-209ENST00000479532 CHRM5P08912 532 aaPredicted RBP5.93□□□□□ -1.46
SF3B1-209ENST00000479532 GFAPP14136 432 aa5.93□□□□□ -1.46
SF3B1-209ENST00000479532 JUPP14923 745 aa5.93□□□□□ -1.46
SF3B1-209ENST00000479532 CDH3P22223 829 aa5.93□□□□□ -1.46
SF3B1-209ENST00000479532 CD1CP29017 333 aa5.93□□□□□ -1.46
SF3B1-209ENST00000479532 CMPK1P30085 196 aa5.93□□□□□ -1.46
SF3B1-209ENST00000479532 SEC24CP53992 1094 aa5.93□□□□□ -1.46
SF3B1-209ENST00000479532 MTTPP55157 894 aa5.93□□□□□ -1.46
SF3B1-209ENST00000479532 POLE2P56282 527 aa5.93□□□□□ -1.46
SF3B1-209ENST00000479532 KRTAP10-2P60368 255 aa5.93□□□□□ -1.46
SF3B1-209ENST00000479532 HPCAP84074 193 aa5.93□□□□□ -1.46
SF3B1-209ENST00000479532 ZNF844Q08AG5 666 aa5.93□□□□□ -1.46
SF3B1-209ENST00000479532 TGFBIQ15582 683 aa5.93□□□□□ -1.46
SF3B1-209ENST00000479532 CYP2A13Q16696 494 aa5.93□□□□□ -1.46
SF3B1-209ENST00000479532 SLC5A12Q1EHB4 618 aa5.93□□□□□ -1.46
SF3B1-209ENST00000479532 LIN52Q52LA3 116 aa5.93□□□□□ -1.46
SF3B1-209ENST00000479532 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.93□□□□□ -1.46
SF3B1-209ENST00000479532 CDKL4Q5MAI5 379 aa5.93□□□□□ -1.46
SF3B1-209ENST00000479532 MFSD4BQ5TF39 518 aa5.93□□□□□ -1.46
SF3B1-209ENST00000479532 HES3Q5TGS1 186 aa5.93□□□□□ -1.46
SF3B1-209ENST00000479532 CACHD1Q5VU97 1274 aa5.93□□□□□ -1.46
SF3B1-209ENST00000479532 NKAIN2Q5VXU1 208 aa5.93□□□□□ -1.46
SF3B1-209ENST00000479532 SULT1C3Q6IMI6 304 aa5.93□□□□□ -1.46
SF3B1-209ENST00000479532 CAPN13Q6MZZ7 669 aaPredicted RBP5.93□□□□□ -1.46
SF3B1-209ENST00000479532 C16orf87Q6PH81 154 aa5.93□□□□□ -1.46
SF3B1-209ENST00000479532 SBSNQ6UWP8 590 aa5.93□□□□□ -1.46
SF3B1-209ENST00000479532 TMEM207Q6UWW9 146 aa5.93□□□□□ -1.46
SF3B1-209ENST00000479532 DHRS13Q6UX07 377 aa5.93□□□□□ -1.46
SF3B1-209ENST00000479532 TMPRSS12Q86WS5 348 aa5.93□□□□□ -1.46
SF3B1-209ENST00000479532 SLC15A3Q8IY34 581 aa5.93□□□□□ -1.46
SF3B1-209ENST00000479532 SRRM1Q8IYB3 904 aaKnown RBP5.93□□□□□ -1.46
SF3B1-209ENST00000479532 KIRREL3Q8IZU9 778 aa5.93□□□□□ -1.46
SF3B1-209ENST00000479532 FBXO39Q8N4B4 442 aa5.93□□□□□ -1.46
SF3B1-209ENST00000479532 TBC1D19Q8N5T2 526 aa5.93□□□□□ -1.46
SF3B1-209ENST00000479532 HMGCLL1Q8TB92 370 aa5.93□□□□□ -1.46
SF3B1-209ENST00000479532 ANKRD49Q8WVL7 239 aa5.93□□□□□ -1.46
SF3B1-209ENST00000479532 JPH3Q8WXH2 748 aaPredicted RBP5.93□□□□□ -1.46
SF3B1-209ENST00000479532 ADAMTS14Q8WXS8 1223 aa5.93□□□□□ -1.46
SF3B1-209ENST00000479532 RSC1A1Q92681 617 aa5.93□□□□□ -1.46
SF3B1-209ENST00000479532 EXT2Q93063 718 aa5.93□□□□□ -1.46
SF3B1-209ENST00000479532 FBXL8Q96CD0 374 aa5.93□□□□□ -1.46
SF3B1-209ENST00000479532 TGM7Q96PF1 710 aa5.93□□□□□ -1.46
SF3B1-209ENST00000479532 MRPL57Q9BQC6 102 aaKnown RBP5.93□□□□□ -1.46
SF3B1-209ENST00000479532 HAUS8Q9BT25 410 aa5.93□□□□□ -1.46
SF3B1-209ENST00000479532 TUBB6Q9BUF5 446 aa5.93□□□□□ -1.46
SF3B1-209ENST00000479532 XKR8Q9H6D3 395 aa5.93□□□□□ -1.46
SF3B1-209ENST00000479532 ALG9Q9H6U8 611 aa5.93□□□□□ -1.46
SF3B1-209ENST00000479532 FANCEQ9HB96 536 aa5.93□□□□□ -1.46
SF3B1-209ENST00000479532 TNFRSF12AQ9NP84 129 aa5.93□□□□□ -1.46
SF3B1-209ENST00000479532 STOX2Q9P2F5 926 aaPredicted RBP5.93□□□□□ -1.46
SF3B1-209ENST00000479532 MYOTQ9UBF9 498 aa5.93□□□□□ -1.46
SF3B1-209ENST00000479532 EPHA6Q9UF33 1036 aa5.93□□□□□ -1.46
SF3B1-209ENST00000479532 GRID1Q9ULK0 1009 aa5.93□□□□□ -1.46
SF3B1-209ENST00000479532 CLCA2Q9UQC9 943 aa5.93□□□□□ -1.46
SF3B1-209ENST00000479532 B3GALT1Q9Y5Z6 326 aa5.93□□□□□ -1.46
SF3B1-209ENST00000479532 MN1Q10571 1320 aaPredicted RBP5.93□□□□□ -1.46
SF3B1-209ENST00000479532 ZFHX2Q9C0A1 2572 aaPredicted RBP5.93□□□□□ -1.46
SF3B1-209ENST00000479532 EP300Q09472 2414 aaPredicted RBP5.92□□□□□ -1.46
SF3B1-209ENST00000479532 A0A0J9YY10 115 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 A0A1W2PPM1 405 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 A0A1W2PQM1 296 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 NCF1BA6NI72 391 aaPredicted RBP5.92□□□□□ -1.46
SF3B1-209ENST00000479532 NCF1CA8MVU1 366 aaPredicted RBP5.92□□□□□ -1.46
SF3B1-209ENST00000479532 NVLO15381 856 aaKnown RBP5.92□□□□□ -1.46
SF3B1-209ENST00000479532 CSO75390 466 aaKnown RBP5.92□□□□□ -1.46
SF3B1-209ENST00000479532 RFPL1O75677 317 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 ZBTB11O95625 1053 aaPredicted RBP5.92□□□□□ -1.46
SF3B1-209ENST00000479532 SLC16A8O95907 504 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 C9P02748 559 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 DBHP09172 617 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 THRAP10827 490 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 ERGP11308 486 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 NCF1P14598 390 aaPredicted RBP5.92□□□□□ -1.46
SF3B1-209ENST00000479532 KRT4P19013 534 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 HRH2P25021 359 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 IMPA1P29218 277 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 PRDX3P30048 256 aaKnown RBP5.92□□□□□ -1.46
SF3B1-209ENST00000479532 CCKBRP32239 447 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 CSTF2P33240 577 aaKnown RBP eCLIP5.92□□□□□ -1.46
SF3B1-209ENST00000479532 CRHR1P34998 444 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 GLRBP48167 497 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 PTDSS1P48651 473 aaKnown RBP5.92□□□□□ -1.46
SF3B1-209ENST00000479532 PIK3CGP48736 1102 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 PGGT1BP53609 377 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 ABATP80404 500 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 ASPHQ12797 758 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 FAPQ12884 760 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 EIF3IQ13347 325 aaKnown RBP5.92□□□□□ -1.46
SF3B1-209ENST00000479532 DCTN2Q13561 401 aaKnown RBP5.92□□□□□ -1.46
SF3B1-209ENST00000479532 NAE1Q13564 534 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 OR4D1Q15615 310 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 PHKG1Q16816 387 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 PPP1R3AQ16821 1122 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 CNPY1Q3B7I2 92 aa5.92□□□□□ -1.46
SF3B1-209ENST00000479532 TECRLQ5HYJ1 363 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms