RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 SMARCD2Q92925 531 aa13.79□□□□□ -0.2
COL20A1-206ENST00000479501 TP53INP1Q96A56 240 aa13.79□□□□□ -0.2
COL20A1-206ENST00000479501 APIPQ96GX9 242 aa13.79□□□□□ -0.2
COL20A1-206ENST00000479501 FCRL4Q96PJ5 515 aa13.79□□□□□ -0.2
COL20A1-206ENST00000479501 ALPK1Q96QP1 1244 aa13.79□□□□□ -0.2
COL20A1-206ENST00000479501 SLC22A12Q96S37 553 aa13.79□□□□□ -0.2
COL20A1-206ENST00000479501 ZNF334Q9HCZ1 680 aaPredicted RBP13.79□□□□□ -0.2
COL20A1-206ENST00000479501 ZNF831Q5JPB2 1677 aa13.79□□□□□ -0.2
COL20A1-206ENST00000479501 PRLP01236 227 aa13.79□□□□□ -0.2
COL20A1-206ENST00000479501 IGLV3-25P01717 112 aa13.79□□□□□ -0.2
COL20A1-206ENST00000479501 DCDC1P59894 354 aa13.79□□□□□ -0.2
COL20A1-206ENST00000479501 ZNF311Q5JNZ3 666 aa13.79□□□□□ -0.2
COL20A1-206ENST00000479501 CTSL3PQ5NE16 218 aa13.79□□□□□ -0.2
COL20A1-206ENST00000479501 SNAP47Q5SQN1 464 aa13.79□□□□□ -0.2
COL20A1-206ENST00000479501 SH2D5Q6ZV89 423 aa13.79□□□□□ -0.2
COL20A1-206ENST00000479501 C9orf43Q8TAL5 461 aaPredicted RBP13.79□□□□□ -0.2
COL20A1-206ENST00000479501 GPR151Q8TDV0 419 aa13.79□□□□□ -0.2
COL20A1-206ENST00000479501 TNFAIP8L1Q8WVP5 186 aa13.79□□□□□ -0.2
COL20A1-206ENST00000479501 TOX2Q96NM4 488 aa13.79□□□□□ -0.2
COL20A1-206ENST00000479501 MCCC1Q96RQ3 725 aaPredicted RBP13.79□□□□□ -0.2
COL20A1-206ENST00000479501 C17orf62Q9BQA9 187 aa13.79□□□□□ -0.2
COL20A1-206ENST00000479501 ITPAQ9BY32 194 aa13.79□□□□□ -0.2
COL20A1-206ENST00000479501 RDH14Q9HBH5 336 aa13.79□□□□□ -0.2
COL20A1-206ENST00000479501 ZDHHC7Q9NXF8 308 aa13.79□□□□□ -0.2
COL20A1-206ENST00000479501 HCN4Q9Y3Q4 1203 aa13.79□□□□□ -0.2
COL20A1-206ENST00000479501 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.78□□□□□ -0.2
COL20A1-206ENST00000479501 FAM25EA8MYX2 175 aa13.78□□□□□ -0.2
COL20A1-206ENST00000479501 I3L521 148 aa13.78□□□□□ -0.2
COL20A1-206ENST00000479501 XPNPEP2O43895 674 aa13.78□□□□□ -0.2
COL20A1-206ENST00000479501 VBP1P61758 197 aa13.78□□□□□ -0.2
COL20A1-206ENST00000479501 PTPRRQ15256 657 aa13.78□□□□□ -0.2
COL20A1-206ENST00000479501 WSCD2Q2TBF2 565 aa13.78□□□□□ -0.2
COL20A1-206ENST00000479501 ENPP6Q6UWR7 440 aa13.78□□□□□ -0.2
COL20A1-206ENST00000479501 AQP11Q8NBQ7 271 aa13.78□□□□□ -0.2
COL20A1-206ENST00000479501 PPP1R14AQ96A00 147 aa13.78□□□□□ -0.2
COL20A1-206ENST00000479501 PDLIM5Q96HC4 596 aaKnown RBP13.78□□□□□ -0.2
COL20A1-206ENST00000479501 POLMQ9NP87 494 aaPredicted RBP13.78□□□□□ -0.2
COL20A1-206ENST00000479501 IL1RAPQ9NPH3 570 aa13.78□□□□□ -0.2
COL20A1-206ENST00000479501 AXIN1O15169 862 aa13.78□□□□□ -0.2
COL20A1-206ENST00000479501 HPRP00739 348 aa13.78□□□□□ -0.2
COL20A1-206ENST00000479501 DGKEP52429 567 aa13.78□□□□□ -0.2
COL20A1-206ENST00000479501 KCNC4Q03721 635 aa13.78□□□□□ -0.2
COL20A1-206ENST00000479501 RBBP4Q09028 425 aa13.78□□□□□ -0.2
COL20A1-206ENST00000479501 ZFP3Q96NJ6 502 aa13.78□□□□□ -0.2
COL20A1-206ENST00000479501 DPH2Q9BQC3 489 aaPredicted RBP13.78□□□□□ -0.2
COL20A1-206ENST00000479501 VAPAQ9P0L0 249 aa13.78□□□□□ -0.2
COL20A1-206ENST00000479501 IQCMA0A1B0GVH7 501 aa13.78□□□□□ -0.2
COL20A1-206ENST00000479501 NDUFB5O43674 189 aa13.78□□□□□ -0.2
COL20A1-206ENST00000479501 SLC25A12O75746 678 aa13.78□□□□□ -0.2
COL20A1-206ENST00000479501 ARHGEF15O94989 841 aa13.78□□□□□ -0.2
COL20A1-206ENST00000479501 IL3P08700 152 aa13.78□□□□□ -0.2
COL20A1-206ENST00000479501 CSNK1DP48730 415 aa13.78□□□□□ -0.2
COL20A1-206ENST00000479501 BTN3A2P78410 334 aa13.78□□□□□ -0.2
COL20A1-206ENST00000479501 FADDQ13158 208 aa13.78□□□□□ -0.2
COL20A1-206ENST00000479501 LASP1Q14847 261 aaKnown RBP13.78□□□□□ -0.2
COL20A1-206ENST00000479501 ZNF613Q6PF04 617 aa13.78□□□□□ -0.2
COL20A1-206ENST00000479501 HMGB4Q8WW32 186 aa13.78□□□□□ -0.2
COL20A1-206ENST00000479501 BIRC8Q96P09 236 aa13.78□□□□□ -0.2
COL20A1-206ENST00000479501 MAPKAP1Q9BPZ7 522 aa13.78□□□□□ -0.2
COL20A1-206ENST00000479501 RSPH9Q9H1X1 276 aaPredicted RBP13.78□□□□□ -0.2
COL20A1-206ENST00000479501 PIGUQ9H490 435 aa13.78□□□□□ -0.2
COL20A1-206ENST00000479501 XKR8Q9H6D3 395 aa13.78□□□□□ -0.2
COL20A1-206ENST00000479501 CLDND1Q9NY35 253 aa13.78□□□□□ -0.2
COL20A1-206ENST00000479501 STOX2Q9P2F5 926 aaPredicted RBP13.78□□□□□ -0.2
COL20A1-206ENST00000479501 PCDHB14Q9Y5E9 798 aa13.78□□□□□ -0.2
COL20A1-206ENST00000479501 PRSS21Q9Y6M0 314 aa13.78□□□□□ -0.2
COL20A1-206ENST00000479501 A0A1B0GVG6 124 aa13.78□□□□□ -0.2
COL20A1-206ENST00000479501 KAT7O95251 611 aa13.78□□□□□ -0.2
COL20A1-206ENST00000479501 MNDAP41218 407 aa13.78□□□□□ -0.2
COL20A1-206ENST00000479501 KCNC1P48547 511 aa13.78□□□□□ -0.2
COL20A1-206ENST00000479501 BLKP51451 505 aa13.78□□□□□ -0.2
COL20A1-206ENST00000479501 CLCN2P51788 898 aa13.78□□□□□ -0.2
COL20A1-206ENST00000479501 TOR1AIP1Q5JTV8 583 aa13.78□□□□□ -0.2
COL20A1-206ENST00000479501 PHOX2BQ99453 314 aa13.78□□□□□ -0.2
COL20A1-206ENST00000479501 CPEB1Q9BZB8 566 aaKnown RBP13.78□□□□□ -0.2
COL20A1-206ENST00000479501 CWH43Q9H720 699 aa13.78□□□□□ -0.2
COL20A1-206ENST00000479501 CNTRLQ7Z7A1 2325 aa13.78□□□□□ -0.2
COL20A1-206ENST00000479501 LAMP1P11279 417 aa13.77□□□□□ -0.2
COL20A1-206ENST00000479501 CCR7P32248 378 aa13.77□□□□□ -0.2
COL20A1-206ENST00000479501 PPP2R2BQ00005 443 aa13.77□□□□□ -0.2
COL20A1-206ENST00000479501 GSTM4Q03013 218 aa13.77□□□□□ -0.2
COL20A1-206ENST00000479501 CLECL1Q8IZS7 167 aa13.77□□□□□ -0.2
COL20A1-206ENST00000479501 DOHHQ9BU89 302 aa13.77□□□□□ -0.2
COL20A1-206ENST00000479501 NTMT1Q9BV86 223 aa13.77□□□□□ -0.2
COL20A1-206ENST00000479501 UCK2Q9BZX2 261 aa13.77□□□□□ -0.2
COL20A1-206ENST00000479501 RACGAP1Q9H0H5 632 aa13.77□□□□□ -0.2
COL20A1-206ENST00000479501 EIF3KQ9UBQ5 218 aaKnown RBP13.77□□□□□ -0.2
COL20A1-206ENST00000479501 A0A1W2PP55 124 aa13.77□□□□□ -0.21
COL20A1-206ENST00000479501 CHURC1-FNTBB4DL54 471 aa13.77□□□□□ -0.21
COL20A1-206ENST00000479501 E7EQ34 232 aa13.77□□□□□ -0.21
COL20A1-206ENST00000479501 TLR4O00206 839 aa13.77□□□□□ -0.21
COL20A1-206ENST00000479501 ADH1BP00325 375 aa13.77□□□□□ -0.21
COL20A1-206ENST00000479501 SLC2A2P11168 524 aaPredicted RBP13.77□□□□□ -0.21
COL20A1-206ENST00000479501 CD9P21926 228 aa13.77□□□□□ -0.21
COL20A1-206ENST00000479501 ALAS2P22557 587 aa13.77□□□□□ -0.21
COL20A1-206ENST00000479501 HLA-FP30511 346 aa13.77□□□□□ -0.21
COL20A1-206ENST00000479501 HTRA3P83110 453 aa13.77□□□□□ -0.21
COL20A1-206ENST00000479501 MINDY4Q4G0A6 757 aa13.77□□□□□ -0.21
COL20A1-206ENST00000479501 KLHL22Q53GT1 634 aa13.77□□□□□ -0.21
COL20A1-206ENST00000479501 ADGRG5Q8IZF4 528 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms