RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 OR5K4A6NMS3 321 aa13.65□□□□□ -0.22
NPHP4-208ENST00000478423 HSD17B1P14061 328 aa13.65□□□□□ -0.22
NPHP4-208ENST00000478423 CTSCP53634 463 aa13.65□□□□□ -0.22
NPHP4-208ENST00000478423 FAM214AQ32MH5 1076 aa13.65□□□□□ -0.22
NPHP4-208ENST00000478423 GTDC1Q4AE62 458 aa13.65□□□□□ -0.22
NPHP4-208ENST00000478423 MANEALQ5VSG8 457 aa13.65□□□□□ -0.22
NPHP4-208ENST00000478423 GALNT10Q86SR1 603 aa13.65□□□□□ -0.22
NPHP4-208ENST00000478423 SIX5Q8N196 739 aa13.65□□□□□ -0.22
NPHP4-208ENST00000478423 ZNF527Q8NB42 609 aa13.65□□□□□ -0.22
NPHP4-208ENST00000478423 OR5AR1Q8NGP9 310 aa13.65□□□□□ -0.22
NPHP4-208ENST00000478423 MMABQ96EY8 250 aaPredicted RBP13.65□□□□□ -0.22
NPHP4-208ENST00000478423 MCHR1Q99705 422 aa13.65□□□□□ -0.22
NPHP4-208ENST00000478423 TMEM30AQ9NV96 361 aa13.65□□□□□ -0.22
NPHP4-208ENST00000478423 LYARQ9NX58 379 aaKnown RBP13.65□□□□□ -0.22
NPHP4-208ENST00000478423 LHX3Q9UBR4 397 aa13.65□□□□□ -0.22
NPHP4-208ENST00000478423 CKLFQ9UBR5 152 aa13.65□□□□□ -0.22
NPHP4-208ENST00000478423 PTBP2Q9UKA9 531 aaKnown RBP13.65□□□□□ -0.22
NPHP4-208ENST00000478423 PEX16Q9Y5Y5 336 aa13.65□□□□□ -0.22
NPHP4-208ENST00000478423 PCDHGA12O60330 932 aa13.65□□□□□ -0.22
NPHP4-208ENST00000478423 CCR7P32248 378 aa13.65□□□□□ -0.22
NPHP4-208ENST00000478423 MAGEA3P43357 314 aa13.65□□□□□ -0.22
NPHP4-208ENST00000478423 ELOCQ15369 112 aa13.65□□□□□ -0.22
NPHP4-208ENST00000478423 UNC5DQ6UXZ4 953 aa13.65□□□□□ -0.22
NPHP4-208ENST00000478423 NRROSQ86YC3 692 aa13.65□□□□□ -0.22
NPHP4-208ENST00000478423 OR8K5Q8NH50 307 aa13.65□□□□□ -0.22
NPHP4-208ENST00000478423 TSEN15Q8WW01 171 aaKnown RBP13.65□□□□□ -0.22
NPHP4-208ENST00000478423 TMEM203Q969S6 136 aa13.65□□□□□ -0.22
NPHP4-208ENST00000478423 TRNT1Q96Q11 434 aaKnown RBP13.65□□□□□ -0.22
NPHP4-208ENST00000478423 CFL2Q9Y281 166 aa13.65□□□□□ -0.22
NPHP4-208ENST00000478423 ZNF451Q9Y4E5 1061 aa13.65□□□□□ -0.22
NPHP4-208ENST00000478423 H0YC42 278 aa13.64□□□□□ -0.23
NPHP4-208ENST00000478423 KHDRBS3O75525 346 aaKnown RBP13.64□□□□□ -0.23
NPHP4-208ENST00000478423 JUNDP17535 347 aa13.64□□□□□ -0.23
NPHP4-208ENST00000478423 PTNP21246 168 aa13.64□□□□□ -0.23
NPHP4-208ENST00000478423 CWF19L1Q69YN2 538 aaKnown RBP13.64□□□□□ -0.23
NPHP4-208ENST00000478423 KLHL24Q6TFL4 600 aa13.64□□□□□ -0.23
NPHP4-208ENST00000478423 C6orf120Q7Z4R8 191 aa13.64□□□□□ -0.23
NPHP4-208ENST00000478423 CARM1Q86X55 608 aa13.64□□□□□ -0.23
NPHP4-208ENST00000478423 OR52E4Q8NGH9 312 aa13.64□□□□□ -0.23
NPHP4-208ENST00000478423 PHOSPHO1Q8TCT1 267 aa13.64□□□□□ -0.23
NPHP4-208ENST00000478423 C20orf27Q9GZN8 174 aa13.64□□□□□ -0.23
NPHP4-208ENST00000478423 PHIPQ8WWQ0 1821 aa13.64□□□□□ -0.23
NPHP4-208ENST00000478423 IQCMA0A1B0GVH7 501 aa13.64□□□□□ -0.23
NPHP4-208ENST00000478423 GRXCR1A8MXD5 290 aa13.64□□□□□ -0.23
NPHP4-208ENST00000478423 SSNA1O43805 119 aa13.64□□□□□ -0.23
NPHP4-208ENST00000478423 RCBTB2O95199 551 aa13.64□□□□□ -0.23
NPHP4-208ENST00000478423 F11P03951 625 aa13.64□□□□□ -0.23
NPHP4-208ENST00000478423 CXCR1P25024 350 aa13.64□□□□□ -0.23
NPHP4-208ENST00000478423 ITGB7P26010 798 aa13.64□□□□□ -0.23
NPHP4-208ENST00000478423 MVKQ03426 396 aa13.64□□□□□ -0.23
NPHP4-208ENST00000478423 PAGE3Q5JUK9 113 aa13.64□□□□□ -0.23
NPHP4-208ENST00000478423 HSDL2Q6YN16 418 aa13.64□□□□□ -0.23
NPHP4-208ENST00000478423 METTL27Q8N6F8 245 aaPredicted RBP13.64□□□□□ -0.23
NPHP4-208ENST00000478423 DOHHQ9BU89 302 aa13.64□□□□□ -0.23
NPHP4-208ENST00000478423 APOBEC3BQ9UH17 382 aaKnown RBP13.64□□□□□ -0.23
NPHP4-208ENST00000478423 SERTAD3Q9UJW9 196 aa13.64□□□□□ -0.23
NPHP4-208ENST00000478423 WBP11Q9Y2W2 641 aaKnown RBP13.64□□□□□ -0.23
NPHP4-208ENST00000478423 ETFAP13804 333 aa13.64□□□□□ -0.23
NPHP4-208ENST00000478423 IL18R1Q13478 541 aa13.64□□□□□ -0.23
NPHP4-208ENST00000478423 ZNF551Q7Z340 670 aaPredicted RBP13.64□□□□□ -0.23
NPHP4-208ENST00000478423 HMGN2P46Q86SG4 172 aa13.64□□□□□ -0.23
NPHP4-208ENST00000478423 TCEANCQ8N8B7 351 aa13.64□□□□□ -0.23
NPHP4-208ENST00000478423 TPSD1Q9BZJ3 242 aa13.64□□□□□ -0.23
NPHP4-208ENST00000478423 HCN3Q9P1Z3 774 aa13.64□□□□□ -0.23
NPHP4-208ENST00000478423 DNMT3BQ9UBC3 853 aaKnown RBP13.64□□□□□ -0.23
NPHP4-208ENST00000478423 MED31Q9Y3C7 131 aa13.64□□□□□ -0.23
NPHP4-208ENST00000478423 MYOCOSA0A1B0GUC4 107 aa13.64□□□□□ -0.23
NPHP4-208ENST00000478423 UBE2QL1A1L167 161 aa13.64□□□□□ -0.23
NPHP4-208ENST00000478423 SAGE2PA6NJ88 616 aa13.64□□□□□ -0.23
NPHP4-208ENST00000478423 ARHGEF33A8MVX0 844 aa13.64□□□□□ -0.23
NPHP4-208ENST00000478423 SCDO00767 359 aa13.64□□□□□ -0.23
NPHP4-208ENST00000478423 MAGEB3O15480 346 aa13.64□□□□□ -0.23
NPHP4-208ENST00000478423 TIMP2P16035 220 aa13.64□□□□□ -0.23
NPHP4-208ENST00000478423 BMP8BP34820 402 aa13.64□□□□□ -0.23
NPHP4-208ENST00000478423 RPL6Q02878 288 aaKnown RBP13.64□□□□□ -0.23
NPHP4-208ENST00000478423 BNIP3Q12983 259 aa13.64□□□□□ -0.23
NPHP4-208ENST00000478423 DECR1Q16698 335 aa13.64□□□□□ -0.23
NPHP4-208ENST00000478423 TYSND1Q2T9J0 566 aa13.64□□□□□ -0.23
NPHP4-208ENST00000478423 WDR45BQ5MNZ6 344 aa13.64□□□□□ -0.23
NPHP4-208ENST00000478423 PRPF38BQ5VTL8 546 aaKnown RBP13.64□□□□□ -0.23
NPHP4-208ENST00000478423 ALKBH2Q6NS38 261 aa13.64□□□□□ -0.23
NPHP4-208ENST00000478423 SHQ1Q6PI26 577 aaKnown RBP13.64□□□□□ -0.23
NPHP4-208ENST00000478423 SLC29A4Q7RTT9 530 aa13.64□□□□□ -0.23
NPHP4-208ENST00000478423 BMP8AQ7Z5Y6 402 aa13.64□□□□□ -0.23
NPHP4-208ENST00000478423 PHOSPHO2Q8TCD6 241 aa13.64□□□□□ -0.23
NPHP4-208ENST00000478423 CD180Q99467 661 aa13.64□□□□□ -0.23
NPHP4-208ENST00000478423 NPC1O15118 1278 aa13.63□□□□□ -0.23
NPHP4-208ENST00000478423 SORBS2O94875 1100 aaKnown RBP13.63□□□□□ -0.23
NPHP4-208ENST00000478423 CYP17A1P05093 508 aa13.63□□□□□ -0.23
NPHP4-208ENST00000478423 ZNF823P16415 610 aa13.63□□□□□ -0.23
NPHP4-208ENST00000478423 ACVR2AP27037 513 aa13.63□□□□□ -0.23
NPHP4-208ENST00000478423 CDKL4Q5MAI5 379 aa13.63□□□□□ -0.23
NPHP4-208ENST00000478423 FAM180BQ6P0A1 224 aa13.63□□□□□ -0.23
NPHP4-208ENST00000478423 KRT77Q7Z794 578 aa13.63□□□□□ -0.23
NPHP4-208ENST00000478423 GALNT15Q8N3T1 639 aa13.63□□□□□ -0.23
NPHP4-208ENST00000478423 C3orf30Q96M34 536 aa13.63□□□□□ -0.23
NPHP4-208ENST00000478423 RDH12Q96NR8 316 aa13.63□□□□□ -0.23
NPHP4-208ENST00000478423 GPER1Q99527 375 aa13.63□□□□□ -0.23
NPHP4-208ENST00000478423 PRSS21Q9Y6M0 314 aa13.63□□□□□ -0.23
NPHP4-208ENST00000478423 C9J4A7 227 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms