RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 TCFL5Q9UL49 500 aa15□□□□□ -0.01
COPS3-207ENST00000477299 PPT2Q9UMR5 302 aa15□□□□□ -0.01
COPS3-207ENST00000477299 PTRH2Q9Y3E5 179 aaKnown RBP15□□□□□ -0.01
COPS3-207ENST00000477299 ANKRD11Q6UB99 2663 aaPredicted RBP15□□□□□ -0.01
COPS3-207ENST00000477299 PTPRQQ9UMZ3 2332 aa15□□□□□ -0.01
COPS3-207ENST00000477299 IGLV3-12A0A075B6K2 115 aa14.99□□□□□ -0.01
COPS3-207ENST00000477299 ARHGAP10A1A4S6 786 aa14.99□□□□□ -0.01
COPS3-207ENST00000477299 URADA6NGE7 173 aa14.99□□□□□ -0.01
COPS3-207ENST00000477299 VSTM2BA6NLU5 285 aa14.99□□□□□ -0.01
COPS3-207ENST00000477299 C9J4A7 227 aa14.99□□□□□ -0.01
COPS3-207ENST00000477299 PIP5K1BO14986 540 aa14.99□□□□□ -0.01
COPS3-207ENST00000477299 TMPRSS11DO60235 418 aa14.99□□□□□ -0.01
COPS3-207ENST00000477299 SKAP2O75563 359 aaPredicted RBP14.99□□□□□ -0.01
COPS3-207ENST00000477299 PRKRAO75569 313 aaKnown RBP14.99□□□□□ -0.01
COPS3-207ENST00000477299 CDC123O75794 336 aaPredicted RBP14.99□□□□□ -0.01
COPS3-207ENST00000477299 BMP10O95393 424 aa14.99□□□□□ -0.01
COPS3-207ENST00000477299 RAB40ALP0C0E4 278 aa14.99□□□□□ -0.01
COPS3-207ENST00000477299 ZGLP1P0C6A0 271 aa14.99□□□□□ -0.01
COPS3-207ENST00000477299 GRK2P25098 689 aa14.99□□□□□ -0.01
COPS3-207ENST00000477299 TPP2P29144 1249 aaPredicted RBP14.99□□□□□ -0.01
COPS3-207ENST00000477299 SERPINB5P36952 375 aa14.99□□□□□ -0.01
COPS3-207ENST00000477299 SSR2P43308 183 aa14.99□□□□□ -0.01
COPS3-207ENST00000477299 RAP1GDS1P52306 607 aa14.99□□□□□ -0.01
COPS3-207ENST00000477299 LIM2P55344 173 aa14.99□□□□□ -0.01
COPS3-207ENST00000477299 RAE1P78406 368 aaKnown RBP14.99□□□□□ -0.01
COPS3-207ENST00000477299 KLC1Q07866 573 aa14.99□□□□□ -0.01
COPS3-207ENST00000477299 AP5B1Q2VPB7 878 aa14.99□□□□□ -0.01
COPS3-207ENST00000477299 METTL4Q8N3J2 472 aa14.99□□□□□ -0.01
COPS3-207ENST00000477299 C1orf52Q8N6N3 182 aaKnown RBP14.99□□□□□ -0.01
COPS3-207ENST00000477299 CHTF18Q8WVB6 975 aa14.99□□□□□ -0.01
COPS3-207ENST00000477299 TWIST2Q8WVJ9 160 aa14.99□□□□□ -0.01
COPS3-207ENST00000477299 PPP1R36Q96LQ0 422 aa14.99□□□□□ -0.01
COPS3-207ENST00000477299 KCNC2Q96PR1 638 aa14.99□□□□□ -0.01
COPS3-207ENST00000477299 CCNL2Q96S94 520 aaPredicted RBP14.99□□□□□ -0.01
COPS3-207ENST00000477299 CSF3RQ99062 836 aa14.99□□□□□ -0.01
COPS3-207ENST00000477299 TBCDQ9BTW9 1192 aa14.99□□□□□ -0.01
COPS3-207ENST00000477299 BRF2Q9HAW0 419 aa14.99□□□□□ -0.01
COPS3-207ENST00000477299 SLCO1B3Q9NPD5 702 aa14.99□□□□□ -0.01
COPS3-207ENST00000477299 LANCL2Q9NS86 450 aa14.99□□□□□ -0.01
COPS3-207ENST00000477299 ZNF282Q9UDV7 671 aaPredicted RBP14.99□□□□□ -0.01
COPS3-207ENST00000477299 FBXW2Q9UKT8 454 aa14.99□□□□□ -0.01
COPS3-207ENST00000477299 RAP2CQ9Y3L5 183 aa14.99□□□□□ -0.01
COPS3-207ENST00000477299 MAP4K5Q9Y4K4 846 aa14.99□□□□□ -0.01
COPS3-207ENST00000477299 A0A087WV48 116 aa14.98□□□□□ -0.01
COPS3-207ENST00000477299 MYOCOSA0A1B0GUC4 107 aa14.98□□□□□ -0.01
COPS3-207ENST00000477299 TMEM8BA6NDV4 472 aa14.98□□□□□ -0.01
COPS3-207ENST00000477299 RRP8O43159 456 aaKnown RBP14.98□□□□□ -0.01
COPS3-207ENST00000477299 B3GALT2O43825 422 aa14.98□□□□□ -0.01
COPS3-207ENST00000477299 B4GALT2O60909 372 aa14.98□□□□□ -0.01
COPS3-207ENST00000477299 RECKO95980 971 aa14.98□□□□□ -0.01
COPS3-207ENST00000477299 KLK1P06870 262 aa14.98□□□□□ -0.01
COPS3-207ENST00000477299 HIST1H1TP22492 207 aaPredicted RBP14.98□□□□□ -0.01
COPS3-207ENST00000477299 MTTPP55157 894 aa14.98□□□□□ -0.01
COPS3-207ENST00000477299 HNRNPH2P55795 449 aaKnown RBP14.98□□□□□ -0.01
COPS3-207ENST00000477299 RPS15P62841 145 aaKnown RBP14.98□□□□□ -0.01
COPS3-207ENST00000477299 BTG2P78543 158 aa14.98□□□□□ -0.01
COPS3-207ENST00000477299 PHEXP78562 749 aa14.98□□□□□ -0.01
COPS3-207ENST00000477299 OCRLQ01968 901 aa14.98□□□□□ -0.01
COPS3-207ENST00000477299 CSTF3Q12996 717 aaKnown RBP14.98□□□□□ -0.01
COPS3-207ENST00000477299 SLAMF1Q13291 335 aa14.98□□□□□ -0.01
COPS3-207ENST00000477299 FAAH2Q6GMR7 532 aa14.98□□□□□ -0.01
COPS3-207ENST00000477299 TRIM46Q7Z4K8 759 aa14.98□□□□□ -0.01
COPS3-207ENST00000477299 CKAP2Q8WWK9 683 aa14.98□□□□□ -0.01
COPS3-207ENST00000477299 STARD8Q92502 1023 aa14.98□□□□□ -0.01
COPS3-207ENST00000477299 SERINC2Q96SA4 455 aa14.98□□□□□ -0.01
COPS3-207ENST00000477299 SLC26A1Q9H2B4 701 aa14.98□□□□□ -0.01
COPS3-207ENST00000477299 VPS29Q9UBQ0 182 aa14.98□□□□□ -0.01
COPS3-207ENST00000477299 MARCOQ9UEW3 520 aaPredicted RBP14.98□□□□□ -0.01
COPS3-207ENST00000477299 PCDHGA6Q9Y5G7 932 aa14.98□□□□□ -0.01
COPS3-207ENST00000477299 DOCK10Q96BY6 2186 aa14.98□□□□□ -0.01
COPS3-207ENST00000477299 CACNA1BQ00975 2339 aa14.97□□□□□ -0.01
COPS3-207ENST00000477299 A0A0A6YYD5 115 aa14.97□□□□□ -0.01
COPS3-207ENST00000477299 ATP6AP2A0A1C7CYW4 349 aa14.97□□□□□ -0.01
COPS3-207ENST00000477299 SERTM1A2A2V5 107 aa14.97□□□□□ -0.01
COPS3-207ENST00000477299 C21orf140B9A014 251 aa14.97□□□□□ -0.01
COPS3-207ENST00000477299 TGFBR3LH3BV60 316 aa14.97□□□□□ -0.01
COPS3-207ENST00000477299 CREG1O75629 220 aa14.97□□□□□ -0.01
COPS3-207ENST00000477299 ATP6AP2O75787 350 aa14.97□□□□□ -0.01
COPS3-207ENST00000477299 SCELO95171 688 aa14.97□□□□□ -0.01
COPS3-207ENST00000477299 ALBP02768 609 aa14.97□□□□□ -0.01
COPS3-207ENST00000477299 PRKAR1AP10644 381 aa14.97□□□□□ -0.01
COPS3-207ENST00000477299 KITP10721 976 aa14.97□□□□□ -0.01
COPS3-207ENST00000477299 PIM1P11309 404 aaPredicted RBP14.97□□□□□ -0.01
COPS3-207ENST00000477299 RPL14P50914 215 aaKnown RBP14.97□□□□□ -0.01
COPS3-207ENST00000477299 OCA2Q04671 838 aa14.97□□□□□ -0.01
COPS3-207ENST00000477299 PDCD2Q16342 344 aaPredicted RBP14.97□□□□□ -0.01
COPS3-207ENST00000477299 HSP90B2PQ58FF3 399 aa14.97□□□□□ -0.01
COPS3-207ENST00000477299 C18orf63Q68DL7 685 aa14.97□□□□□ -0.01
COPS3-207ENST00000477299 MRM1Q6IN84 353 aaKnown RBP14.97□□□□□ -0.01
COPS3-207ENST00000477299 C19orf48Q6RUI8 117 aa14.97□□□□□ -0.01
COPS3-207ENST00000477299 LRRC69Q6ZNQ3 347 aa14.97□□□□□ -0.01
COPS3-207ENST00000477299 COMMD6Q7Z4G1 85 aa14.97□□□□□ -0.01
COPS3-207ENST00000477299 DDIASQ8IXT1 998 aa14.97□□□□□ -0.01
COPS3-207ENST00000477299 MMP21Q8N119 569 aa14.97□□□□□ -0.01
COPS3-207ENST00000477299 FAM47BQ8NA70 645 aa14.97□□□□□ -0.01
COPS3-207ENST00000477299 KIAA1143Q96AT1 154 aaPredicted RBP14.97□□□□□ -0.01
COPS3-207ENST00000477299 FKBP10Q96AY3 582 aa14.97□□□□□ -0.01
COPS3-207ENST00000477299 MIEF2Q96C03 454 aa14.97□□□□□ -0.01
COPS3-207ENST00000477299 SLC45A3Q96JT2 553 aa14.97□□□□□ -0.01
COPS3-207ENST00000477299 EBPLQ9BY08 206 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms