RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 CRB2Q5IJ48 1285 aa12.63□□□□□ -0.39
ACTN4-205ENST00000477174 PLAG1Q6DJT9 500 aa12.63□□□□□ -0.39
ACTN4-205ENST00000477174 LANCL3Q6ZV70 420 aa12.63□□□□□ -0.39
ACTN4-205ENST00000477174 SLC22A9Q8IVM8 553 aa12.63□□□□□ -0.39
ACTN4-205ENST00000477174 M1APQ8TC57 530 aa12.63□□□□□ -0.39
ACTN4-205ENST00000477174 AENQ8WTP8 325 aaKnown RBP12.63□□□□□ -0.39
ACTN4-205ENST00000477174 PSMF1Q92530 271 aa12.63□□□□□ -0.39
ACTN4-205ENST00000477174 PNPLA2Q96AD5 504 aa12.63□□□□□ -0.39
ACTN4-205ENST00000477174 RGMAQ96B86 450 aa12.63□□□□□ -0.39
ACTN4-205ENST00000477174 MTERF1Q99551 399 aaKnown RBP12.63□□□□□ -0.39
ACTN4-205ENST00000477174 LPAR4Q99677 370 aa12.63□□□□□ -0.39
ACTN4-205ENST00000477174 ERVK-6Q9BXR3 956 aa12.63□□□□□ -0.39
ACTN4-205ENST00000477174 RBCK1Q9BYM8 510 aa12.63□□□□□ -0.39
ACTN4-205ENST00000477174 EPN3Q9H201 632 aa12.63□□□□□ -0.39
ACTN4-205ENST00000477174 ZBTB26Q9HCK0 441 aa12.63□□□□□ -0.39
ACTN4-205ENST00000477174 LYRM4Q9HD34 91 aa12.63□□□□□ -0.39
ACTN4-205ENST00000477174 KCMF1Q9P0J7 381 aa12.63□□□□□ -0.39
ACTN4-205ENST00000477174 PPT2Q9UMR5 302 aa12.63□□□□□ -0.39
ACTN4-205ENST00000477174 DAPP1Q9UN19 280 aa12.63□□□□□ -0.39
ACTN4-205ENST00000477174 MRPS33Q9Y291 106 aaKnown RBP12.63□□□□□ -0.39
ACTN4-205ENST00000477174 B3GNT3Q9Y2A9 372 aa12.63□□□□□ -0.39
ACTN4-205ENST00000477174 CNTRLQ7Z7A1 2325 aa12.63□□□□□ -0.39
ACTN4-205ENST00000477174 PRRC2CQ9Y520 2896 aaKnown RBP12.63□□□□□ -0.39
ACTN4-205ENST00000477174 IGKV3D-11A0A0A0MRZ8 115 aa12.62□□□□□ -0.39
ACTN4-205ENST00000477174 IGHV3-20A0A0C4DH32 117 aa12.62□□□□□ -0.39
ACTN4-205ENST00000477174 A0A0G2JN53 185 aa12.62□□□□□ -0.39
ACTN4-205ENST00000477174 SYNDIG1LA6NDD5 238 aa12.62□□□□□ -0.39
ACTN4-205ENST00000477174 CYR61O00622 381 aa12.62□□□□□ -0.39
ACTN4-205ENST00000477174 DLX3O60479 287 aa12.62□□□□□ -0.39
ACTN4-205ENST00000477174 SCELO95171 688 aa12.62□□□□□ -0.39
ACTN4-205ENST00000477174 OTCP00480 354 aa12.62□□□□□ -0.39
ACTN4-205ENST00000477174 RPS17P08708 135 aaKnown RBP12.62□□□□□ -0.39
ACTN4-205ENST00000477174 IMPDH1P20839 514 aa12.62□□□□□ -0.39
ACTN4-205ENST00000477174 HIST1H1TP22492 207 aaPredicted RBP12.62□□□□□ -0.39
ACTN4-205ENST00000477174 ATP5A1P25705 553 aaKnown RBP12.62□□□□□ -0.39
ACTN4-205ENST00000477174 PRKAA2P54646 552 aa12.62□□□□□ -0.39
ACTN4-205ENST00000477174 LIM2P55344 173 aa12.62□□□□□ -0.39
ACTN4-205ENST00000477174 RAB38P57729 211 aa12.62□□□□□ -0.39
ACTN4-205ENST00000477174 OR4D2P58180 307 aa12.62□□□□□ -0.39
ACTN4-205ENST00000477174 BTG2P78543 158 aa12.62□□□□□ -0.39
ACTN4-205ENST00000477174 MFAP5Q13361 173 aa12.62□□□□□ -0.39
ACTN4-205ENST00000477174 CUL3Q13618 768 aa12.62□□□□□ -0.39
ACTN4-205ENST00000477174 ZRSR2Q15696 482 aaKnown RBP12.62□□□□□ -0.39
ACTN4-205ENST00000477174 SFT2D3Q587I9 215 aa12.62□□□□□ -0.39
ACTN4-205ENST00000477174 OR4C11Q6IEV9 310 aa12.62□□□□□ -0.39
ACTN4-205ENST00000477174 MILR1Q7Z6M3 343 aa12.62□□□□□ -0.39
ACTN4-205ENST00000477174 ZNF595Q8IYB9 648 aa12.62□□□□□ -0.39
ACTN4-205ENST00000477174 CYP4X1Q8N118 509 aa12.62□□□□□ -0.39
ACTN4-205ENST00000477174 ACOT4Q8N9L9 421 aa12.62□□□□□ -0.39
ACTN4-205ENST00000477174 C7orf57Q8NEG2 295 aa12.62□□□□□ -0.39
ACTN4-205ENST00000477174 OR52B6Q8NGF0 335 aa12.62□□□□□ -0.39
ACTN4-205ENST00000477174 WDR20Q8TBZ3 569 aa12.62□□□□□ -0.39
ACTN4-205ENST00000477174 ZNF483Q8TF39 744 aaPredicted RBP12.62□□□□□ -0.39
ACTN4-205ENST00000477174 TSLPQ969D9 159 aa12.62□□□□□ -0.39
ACTN4-205ENST00000477174 CAVIN3Q969G5 261 aa12.62□□□□□ -0.39
ACTN4-205ENST00000477174 CCDC126Q96EE4 140 aa12.62□□□□□ -0.39
ACTN4-205ENST00000477174 NSUN5Q96P11 429 aaKnown RBP12.62□□□□□ -0.39
ACTN4-205ENST00000477174 WDR77Q9BQA1 342 aaPredicted RBP12.62□□□□□ -0.39
ACTN4-205ENST00000477174 PARD6BQ9BYG5 372 aa12.62□□□□□ -0.39
ACTN4-205ENST00000477174 ROPN1BQ9BZX4 212 aaPredicted RBP12.62□□□□□ -0.39
ACTN4-205ENST00000477174 OR51B5Q9H339 312 aa12.62□□□□□ -0.39
ACTN4-205ENST00000477174 EPS8L2Q9H6S3 715 aa12.62□□□□□ -0.39
ACTN4-205ENST00000477174 ROPN1Q9HAT0 212 aaPredicted RBP12.62□□□□□ -0.39
ACTN4-205ENST00000477174 ZBTB20Q9HC78 741 aaPredicted RBP12.62□□□□□ -0.39
ACTN4-205ENST00000477174 DMRT3Q9NQL9 472 aa12.62□□□□□ -0.39
ACTN4-205ENST00000477174 GRID1Q9ULK0 1009 aa12.62□□□□□ -0.39
ACTN4-205ENST00000477174 GCN1Q92616 2671 aaKnown RBP12.61□□□□□ -0.39
ACTN4-205ENST00000477174 TCRBV16S1A1N1A0A5B0 115 aa12.61□□□□□ -0.39
ACTN4-205ENST00000477174 BLACEA4D250 179 aa12.61□□□□□ -0.39
ACTN4-205ENST00000477174 TTLL8A6PVC2 850 aa12.61□□□□□ -0.39
ACTN4-205ENST00000477174 GLRA3O75311 464 aa12.61□□□□□ -0.39
ACTN4-205ENST00000477174 SEC24DO94855 1032 aaPredicted RBP12.61□□□□□ -0.39
ACTN4-205ENST00000477174 MAOAP21397 527 aa12.61□□□□□ -0.39
ACTN4-205ENST00000477174 CERS1P27544 350 aa12.61□□□□□ -0.39
ACTN4-205ENST00000477174 CRHR1P34998 444 aa12.61□□□□□ -0.39
ACTN4-205ENST00000477174 ARL1P40616 181 aaPredicted RBP12.61□□□□□ -0.39
ACTN4-205ENST00000477174 RAP1GDS1P52306 607 aa12.61□□□□□ -0.39
ACTN4-205ENST00000477174 CLCQ05315 142 aa12.61□□□□□ -0.39
ACTN4-205ENST00000477174 TRAF3Q13114 568 aa12.61□□□□□ -0.39
ACTN4-205ENST00000477174 DDX39BQ13838 428 aaKnown RBP12.61□□□□□ -0.39
ACTN4-205ENST00000477174 ERCC6LQ2NKX8 1250 aa12.61□□□□□ -0.39
ACTN4-205ENST00000477174 BTBD16Q32M84 506 aa12.61□□□□□ -0.39
ACTN4-205ENST00000477174 CCDC153Q494R4 210 aa12.61□□□□□ -0.39
ACTN4-205ENST00000477174 PLEKHN1Q494U1 663 aaPredicted RBP12.61□□□□□ -0.39
ACTN4-205ENST00000477174 GGTA1PQ4G0N0 100 aa12.61□□□□□ -0.39
ACTN4-205ENST00000477174 ZNF678Q5SXM1 525 aa12.61□□□□□ -0.39
ACTN4-205ENST00000477174 FRG2Q64ET8 278 aa12.61□□□□□ -0.39
ACTN4-205ENST00000477174 SLC6A19Q695T7 634 aa12.61□□□□□ -0.39
ACTN4-205ENST00000477174 PAPD4Q6PIY7 484 aaKnown RBP12.61□□□□□ -0.39
ACTN4-205ENST00000477174 Q6ZS92 163 aa12.61□□□□□ -0.39
ACTN4-205ENST00000477174 SCUBE1Q8IWY4 988 aa12.61□□□□□ -0.39
ACTN4-205ENST00000477174 RIBC1Q8N443 379 aaPredicted RBP12.61□□□□□ -0.39
ACTN4-205ENST00000477174 MYRIPQ8NFW9 859 aa12.61□□□□□ -0.39
ACTN4-205ENST00000477174 BRIX1Q8TDN6 353 aaKnown RBP12.61□□□□□ -0.39
ACTN4-205ENST00000477174 EPS8L3Q8TE67 593 aaKnown RBP12.61□□□□□ -0.39
ACTN4-205ENST00000477174 PPP4R1Q8TF05 950 aa12.61□□□□□ -0.39
ACTN4-205ENST00000477174 CDK15Q96Q40 435 aa12.61□□□□□ -0.39
ACTN4-205ENST00000477174 FRG2BQ96QU4 278 aa12.61□□□□□ -0.39
ACTN4-205ENST00000477174 SERPINI1Q99574 410 aa12.61□□□□□ -0.39
ACTN4-205ENST00000477174 MFRPQ9BY79 579 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms