RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 RGS14O43566 566 aa10.15□□□□□ -0.79
ABCF1-205ENST00000475993 PSIP1O75475 530 aaKnown RBP10.15□□□□□ -0.79
ABCF1-205ENST00000475993 ALDH1A1P00352 501 aa10.15□□□□□ -0.79
ABCF1-205ENST00000475993 PRSS56P0CW18 603 aa10.15□□□□□ -0.79
ABCF1-205ENST00000475993 SLC2A2P11168 524 aaPredicted RBP10.15□□□□□ -0.79
ABCF1-205ENST00000475993 HK1P19367 917 aa10.15□□□□□ -0.79
ABCF1-205ENST00000475993 RECQLP46063 649 aaPredicted RBP10.15□□□□□ -0.79
ABCF1-205ENST00000475993 EPHA5P54756 1037 aa10.15□□□□□ -0.79
ABCF1-205ENST00000475993 MAXP61244 160 aa10.15□□□□□ -0.79
ABCF1-205ENST00000475993 PCBP2Q15366 365 aaKnown RBP eCLIP10.15□□□□□ -0.795e-26■■■■■ 53.2
ABCF1-205ENST00000475993 KLHL12Q53G59 568 aa10.15□□□□□ -0.79
ABCF1-205ENST00000475993 ANKRD39Q53RE8 183 aa10.15□□□□□ -0.79
ABCF1-205ENST00000475993 ZNF628Q5EBL2 1059 aa10.15□□□□□ -0.79
ABCF1-205ENST00000475993 RAB41Q5JT25 222 aa10.15□□□□□ -0.79
ABCF1-205ENST00000475993 MANEALQ5VSG8 457 aa10.15□□□□□ -0.79
ABCF1-205ENST00000475993 SLC44A2Q8IWA5 706 aaPredicted RBP10.15□□□□□ -0.79
ABCF1-205ENST00000475993 LINC01465Q8N7H1 131 aa10.15□□□□□ -0.79
ABCF1-205ENST00000475993 TRIM43Q96BQ3 446 aaPredicted RBP10.15□□□□□ -0.79
ABCF1-205ENST00000475993 EXOC2Q96KP1 924 aa10.15□□□□□ -0.79
ABCF1-205ENST00000475993 SERPINB11Q96P15 392 aa10.15□□□□□ -0.79
ABCF1-205ENST00000475993 SOSTQ9BQB4 213 aa10.15□□□□□ -0.79
ABCF1-205ENST00000475993 DPCDQ9BVM2 203 aaPredicted RBP10.15□□□□□ -0.79
ABCF1-205ENST00000475993 CD244Q9BZW8 370 aa10.15□□□□□ -0.79
ABCF1-205ENST00000475993 PPP1R3EQ9H7J1 279 aa10.15□□□□□ -0.79
ABCF1-205ENST00000475993 RC3H2Q9HBD1 1191 aaKnown RBP10.15□□□□□ -0.79
ABCF1-205ENST00000475993 STARD7Q9NQZ5 370 aa10.15□□□□□ -0.79
ABCF1-205ENST00000475993 RNF19AQ9NV58 838 aa10.15□□□□□ -0.79
ABCF1-205ENST00000475993 DNAJC11Q9NVH1 559 aa10.15□□□□□ -0.79
ABCF1-205ENST00000475993 NDUFB11Q9NX14 153 aa10.15□□□□□ -0.79
ABCF1-205ENST00000475993 SLC6A14Q9UN76 642 aa10.15□□□□□ -0.79
ABCF1-205ENST00000475993 DUSP12Q9UNI6 340 aa10.15□□□□□ -0.79
ABCF1-205ENST00000475993 LIPT1Q9Y234 373 aa10.15□□□□□ -0.79
ABCF1-205ENST00000475993 PCDHGB7Q9Y5F8 929 aa10.15□□□□□ -0.79
ABCF1-205ENST00000475993 LOC285095A0A1B0GVY8 99 aa10.14□□□□□ -0.79
ABCF1-205ENST00000475993 M0R129 80 aa10.14□□□□□ -0.79
ABCF1-205ENST00000475993 QSOX1O00391 747 aa10.14□□□□□ -0.79
ABCF1-205ENST00000475993 KHNYNO15037 678 aaKnown RBP10.14□□□□□ -0.79
ABCF1-205ENST00000475993 CHP2O43745 196 aa10.14□□□□□ -0.79
ABCF1-205ENST00000475993 OR1I1O60431 355 aa10.14□□□□□ -0.79
ABCF1-205ENST00000475993 CDRT1O95170 752 aa10.14□□□□□ -0.79
ABCF1-205ENST00000475993 VTNP04004 478 aa10.14□□□□□ -0.79
ABCF1-205ENST00000475993 PIPP12273 146 aaPredicted RBP10.14□□□□□ -0.79
ABCF1-205ENST00000475993 APEX1P27695 318 aaKnown RBP10.14□□□□□ -0.79
ABCF1-205ENST00000475993 CAPZA1P52907 286 aa10.14□□□□□ -0.79
ABCF1-205ENST00000475993 DSC2Q02487 901 aa10.14□□□□□ -0.79
ABCF1-205ENST00000475993 HNRNPA0Q13151 305 aaKnown RBP10.14□□□□□ -0.79
ABCF1-205ENST00000475993 EXOSC2Q13868 293 aaKnown RBP10.14□□□□□ -0.79
ABCF1-205ENST00000475993 FGFBP1Q14512 234 aa10.14□□□□□ -0.79
ABCF1-205ENST00000475993 USP39Q53GS9 565 aaKnown RBP10.14□□□□□ -0.79
ABCF1-205ENST00000475993 TRIQKQ629K1 86 aa10.14□□□□□ -0.79
ABCF1-205ENST00000475993 HTR3DQ70Z44 454 aa10.14□□□□□ -0.79
ABCF1-205ENST00000475993 ABI3BPQ7Z7G0 1075 aa10.14□□□□□ -0.79
ABCF1-205ENST00000475993 TRIM69Q86WT6 500 aa10.14□□□□□ -0.79
ABCF1-205ENST00000475993 SLC5A8Q8N695 610 aa10.14□□□□□ -0.79
ABCF1-205ENST00000475993 OR13C4Q8NGS5 318 aa10.14□□□□□ -0.79
ABCF1-205ENST00000475993 RNF34Q969K3 372 aa10.14□□□□□ -0.79
ABCF1-205ENST00000475993 TADA1Q96BN2 335 aa10.14□□□□□ -0.79
ABCF1-205ENST00000475993 ZSWIM3Q96MP5 696 aa10.14□□□□□ -0.79
ABCF1-205ENST00000475993 HTATIP2Q9BUP3 242 aa10.14□□□□□ -0.79
ABCF1-205ENST00000475993 GPR63Q9BZJ6 419 aa10.14□□□□□ -0.79
ABCF1-205ENST00000475993 NT5MQ9NPB1 228 aa10.14□□□□□ -0.79
ABCF1-205ENST00000475993 IMPAD1Q9NX62 359 aa10.14□□□□□ -0.79
ABCF1-205ENST00000475993 MALT1Q9UDY8 824 aa10.14□□□□□ -0.79
ABCF1-205ENST00000475993 POFUT2Q9Y2G5 429 aa10.14□□□□□ -0.79
ABCF1-205ENST00000475993 CDH10Q9Y6N8 788 aa10.14□□□□□ -0.79
ABCF1-205ENST00000475993 PMS2P1A4D2B8 440 aa10.14□□□□□ -0.79
ABCF1-205ENST00000475993 KCNK5O95279 499 aa10.14□□□□□ -0.79
ABCF1-205ENST00000475993 OTCP00480 354 aa10.14□□□□□ -0.79
ABCF1-205ENST00000475993 IFNA7P01567 189 aa10.14□□□□□ -0.79
ABCF1-205ENST00000475993 ZP3P21754 424 aa10.14□□□□□ -0.79
ABCF1-205ENST00000475993 BAG6P46379 1132 aa10.14□□□□□ -0.79
ABCF1-205ENST00000475993 CLCN7P51798 805 aa10.14□□□□□ -0.79
ABCF1-205ENST00000475993 RAB14P61106 215 aa10.14□□□□□ -0.79
ABCF1-205ENST00000475993 MXD1Q05195 221 aa10.14□□□□□ -0.79
ABCF1-205ENST00000475993 SMAD2Q15796 467 aaKnown RBP10.14□□□□□ -0.79
ABCF1-205ENST00000475993 DCAF4L1Q3SXM0 396 aa10.14□□□□□ -0.79
ABCF1-205ENST00000475993 HES5Q5TA89 166 aa10.14□□□□□ -0.79
ABCF1-205ENST00000475993 ALKAL1Q6UXT8 129 aa10.14□□□□□ -0.79
ABCF1-205ENST00000475993 CATSPERGQ6ZRH7 1159 aa10.14□□□□□ -0.79
ABCF1-205ENST00000475993 RNF165Q6ZSG1 346 aa10.14□□□□□ -0.79
ABCF1-205ENST00000475993 ANKRD46Q86W74 232 aa10.14□□□□□ -0.79
ABCF1-205ENST00000475993 Q8N402 240 aa10.14□□□□□ -0.79
ABCF1-205ENST00000475993 LNX2Q8N448 690 aa10.14□□□□□ -0.79
ABCF1-205ENST00000475993 C1orf52Q8N6N3 182 aaKnown RBP10.14□□□□□ -0.79
ABCF1-205ENST00000475993 NELL1Q92832 810 aa10.14□□□□□ -0.79
ABCF1-205ENST00000475993 KCNJ15Q99712 375 aa10.14□□□□□ -0.79
ABCF1-205ENST00000475993 MED10Q9BTT4 135 aa10.14□□□□□ -0.79
ABCF1-205ENST00000475993 ABHD16BQ9H3Z7 469 aa10.14□□□□□ -0.79
ABCF1-205ENST00000475993 ZNF768Q9H5H4 540 aaKnown RBP10.14□□□□□ -0.79
ABCF1-205ENST00000475993 PRDM9Q9NQV7 894 aa10.14□□□□□ -0.79
ABCF1-205ENST00000475993 RLIMQ9NVW2 624 aa10.14□□□□□ -0.79
ABCF1-205ENST00000475993 ACTR10Q9NZ32 417 aa10.14□□□□□ -0.79
ABCF1-205ENST00000475993 E9PAM4 449 aa10.13□□□□□ -0.79
ABCF1-205ENST00000475993 INMT-MINDY4F8WBC2 141 aa10.13□□□□□ -0.79
ABCF1-205ENST00000475993 SLC28A1O00337 649 aa10.13□□□□□ -0.79
ABCF1-205ENST00000475993 CELF2O95319 508 aaKnown RBP10.13□□□□□ -0.79
ABCF1-205ENST00000475993 B3GALT4O96024 378 aa10.13□□□□□ -0.79
ABCF1-205ENST00000475993 ODC1P11926 461 aa10.13□□□□□ -0.79
ABCF1-205ENST00000475993 LHCGRP22888 699 aa10.13□□□□□ -0.79
ABCF1-205ENST00000475993 POU3F4P49335 361 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms