RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 LSM7Q9UK45 103 aaKnown RBP4.68□□□□□ -1.66
NPHP3-206ENST00000474871 ATRNL1Q5VV63 1379 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 MANSC4A6NHS7 340 aaPredicted RBP4.67□□□□□ -1.66
NPHP3-206ENST00000474871 UPK3BL1B0FP48 263 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 B2RBV5 119 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 UPK3BL2E5RIL1 263 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 MKRN2OSH3BPM6 223 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 EREGO14944 169 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 SEC14L2O76054 403 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 IL18RAPO95256 599 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 LATS1O95835 1130 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 ALPPP05187 535 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 ANXA5P08758 320 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 ALPPL2P10696 532 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 RALBP11234 206 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 AGAP20933 346 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 CCR8P51685 355 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 PGDP52209 483 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 YWHAGP61981 247 aaKnown RBP eCLIP4.67□□□□□ -1.66
NPHP3-206ENST00000474871 DCDP81605 110 aaKnown RBP4.67□□□□□ -1.66
NPHP3-206ENST00000474871 CDR2Q01850 454 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 TRAF2Q12933 501 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 THOC5Q13769 683 aaKnown RBP4.67□□□□□ -1.66
NPHP3-206ENST00000474871 HEPACAMQ14CZ8 416 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 TAB1Q15750 504 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 TOMM34Q15785 309 aaPredicted RBP4.67□□□□□ -1.66
NPHP3-206ENST00000474871 CCDC6Q16204 474 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 TSTD2Q5T7W7 516 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 AGAP6Q5VW22 663 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 NXNL2Q5VZ03 156 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 REP15Q6BDI9 236 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 CYHR1Q6ZMK1 362 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 GAREM2Q75VX8 874 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.67□□□□□ -1.66
NPHP3-206ENST00000474871 MRGPRGQ86SM5 289 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 ULK2Q8IYT8 1036 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 EXD3Q8N9H8 876 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 ECHDC3Q96DC8 303 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 SIPA1Q96FS4 1042 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 TRMT61AQ96FX7 289 aaKnown RBP4.67□□□□□ -1.66
NPHP3-206ENST00000474871 CPB2Q96IY4 423 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 AGAP4Q96P64 663 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 IFT27Q9BW83 186 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 ERVK-6Q9BXR3 956 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 CACNG6Q9BXT2 260 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 OR2AG1Q9H205 316 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 CAB39LQ9H9S4 337 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 ZC4H2Q9NQZ6 224 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 DNAJC11Q9NVH1 559 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 GHRLQ9UBU3 117 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 PEF1Q9UBV8 284 aaKnown RBP4.67□□□□□ -1.66
NPHP3-206ENST00000474871 MAN1B1Q9UKM7 699 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 SRPK3Q9UPE1 567 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 SLC27A6Q9Y2P4 619 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 DNAJC25-GNG10A0A024R161 153 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 CCL15-CCL14A0A0B4J2E2 113 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 ZNF185O15231 689 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 GSC2O15499 205 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 LCMT2O60294 686 aaKnown RBP4.67□□□□□ -1.66
NPHP3-206ENST00000474871 IGHV2-5P01817 119 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 NR3C1P04150 777 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 ACSM4P0C7M7 580 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 EEF1DP29692 281 aaKnown RBP4.67□□□□□ -1.66
NPHP3-206ENST00000474871 ID1P41134 155 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 ATP5J2P56134 94 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 HERVK_113P63132 956 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 TRIP10Q15642 601 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 CEBPEQ15744 281 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 FSCN1Q16658 493 aaKnown RBP4.67□□□□□ -1.66
NPHP3-206ENST00000474871 CCL15Q16663 113 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 ZBED5Q49AG3 693 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 ABHD17BQ5VST6 288 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 NAPEPLDQ6IQ20 393 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 LAYNQ6UX15 382 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 CREB3L2Q70SY1 520 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 DYMQ7RTS9 669 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 HDDC2Q7Z4H3 204 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 RAB42Q8N4Z0 105 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 AOPEPQ8N6M6 819 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 OR8J3Q8NGG0 315 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 OR5T2Q8NGG2 359 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 SP7Q8TDD2 431 aaPredicted RBP4.67□□□□□ -1.66
NPHP3-206ENST00000474871 TCEAL3Q969E4 200 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 GTPBP2Q9BX10 602 aaKnown RBP4.67□□□□□ -1.66
NPHP3-206ENST00000474871 OSBPL8Q9BZF1 889 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 NEUROG2Q9H2A3 272 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 COPS7BQ9H9Q2 264 aaPredicted RBP4.67□□□□□ -1.66
NPHP3-206ENST00000474871 DNAJC28Q9NX36 388 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 CNIH4Q9P003 139 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 CD84Q9UIB8 345 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 HAO1Q9UJM8 370 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 RHBDD3Q9Y3P4 386 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 HYOU1Q9Y4L1 999 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 GOLGB1Q14789 3259 aaKnown RBP4.67□□□□□ -1.66
NPHP3-206ENST00000474871 TBC1D3KA0A087X1G2 549 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 MROH6A6NGR9 719 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 DDTLA6NHG4 134 aaPredicted RBP4.67□□□□□ -1.66
NPHP3-206ENST00000474871 DRGXA6NNA5 263 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 SEPT4O43236 478 aa4.67□□□□□ -1.66
NPHP3-206ENST00000474871 PRAMEF2O60811 474 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms