RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 MRM1Q6IN84 353 aaKnown RBP9.35□□□□□ -0.91
USP39-214ENST00000474572 TBC1D3CQ6IPX1 549 aa9.35□□□□□ -0.91
USP39-214ENST00000474572 FAHD1Q6P587 224 aa9.35□□□□□ -0.91
USP39-214ENST00000474572 TMEM26Q6ZUK4 368 aa9.35□□□□□ -0.91
USP39-214ENST00000474572 CEP68Q76N32 757 aa9.35□□□□□ -0.91
USP39-214ENST00000474572 VTCN1Q7Z7D3 282 aa9.35□□□□□ -0.91
USP39-214ENST00000474572 GALNT10Q86SR1 603 aa9.35□□□□□ -0.91
USP39-214ENST00000474572 CYP4Z1Q86W10 505 aa9.35□□□□□ -0.91
USP39-214ENST00000474572 TBC1D3Q8IZP1 549 aaPredicted RBP9.35□□□□□ -0.91
USP39-214ENST00000474572 C8orf59Q8N0T1 100 aaPredicted RBP9.35□□□□□ -0.91
USP39-214ENST00000474572 MMP21Q8N119 569 aa9.35□□□□□ -0.91
USP39-214ENST00000474572 CHDHQ8NE62 594 aaPredicted RBP9.35□□□□□ -0.91
USP39-214ENST00000474572 GANCQ8TET4 914 aa9.35□□□□□ -0.91
USP39-214ENST00000474572 OR1E3Q8WZA6 343 aa9.35□□□□□ -0.91
USP39-214ENST00000474572 HDAC2Q92769 488 aaKnown RBP9.35□□□□□ -0.91
USP39-214ENST00000474572 ZNF566Q969W8 418 aa9.35□□□□□ -0.91
USP39-214ENST00000474572 NEURL3Q96EH8 262 aa9.35□□□□□ -0.91
USP39-214ENST00000474572 PDXPQ96GD0 296 aa9.35□□□□□ -0.91
USP39-214ENST00000474572 MSANTD3Q96H12 275 aa9.35□□□□□ -0.91
USP39-214ENST00000474572 CNDP2Q96KP4 475 aaKnown RBP9.35□□□□□ -0.91
USP39-214ENST00000474572 BMFQ96LC9 184 aa9.35□□□□□ -0.91
USP39-214ENST00000474572 PRAP1Q96NZ9 151 aa9.35□□□□□ -0.91
USP39-214ENST00000474572 EPYCQ99645 322 aa9.35□□□□□ -0.91
USP39-214ENST00000474572 PITX2Q99697 317 aa9.35□□□□□ -0.91
USP39-214ENST00000474572 DOHHQ9BU89 302 aa9.35□□□□□ -0.91
USP39-214ENST00000474572 NEUROD4Q9HD90 331 aa9.35□□□□□ -0.91
USP39-214ENST00000474572 FZD3Q9NPG1 666 aa9.35□□□□□ -0.91
USP39-214ENST00000474572 SLAMF7Q9NQ25 335 aa9.35□□□□□ -0.91
USP39-214ENST00000474572 MIEF1Q9NQG6 463 aa9.35□□□□□ -0.91
USP39-214ENST00000474572 THSD1Q9NS62 852 aa9.35□□□□□ -0.91
USP39-214ENST00000474572 SIRT3Q9NTG7 399 aaPredicted RBP9.35□□□□□ -0.91
USP39-214ENST00000474572 ACSS1Q9NUB1 689 aaPredicted RBP9.35□□□□□ -0.91
USP39-214ENST00000474572 ADPRHL2Q9NX46 363 aa9.35□□□□□ -0.91
USP39-214ENST00000474572 EHD3Q9NZN3 535 aa9.35□□□□□ -0.91
USP39-214ENST00000474572 SCHIP1Q9P0W5 487 aaPredicted RBP9.35□□□□□ -0.91
USP39-214ENST00000474572 THEGQ9P2T0 379 aa9.35□□□□□ -0.91
USP39-214ENST00000474572 KLF15Q9UIH9 416 aa9.35□□□□□ -0.91
USP39-214ENST00000474572 NAALAD2Q9Y3Q0 740 aa9.35□□□□□ -0.91
USP39-214ENST00000474572 GPSM3Q9Y4H4 160 aa9.35□□□□□ -0.91
USP39-214ENST00000474572 PIAS3Q9Y6X2 628 aa9.35□□□□□ -0.91
USP39-214ENST00000474572 HSPE1-MOB4S4R3N1 261 aa9.35□□□□□ -0.91
USP39-214ENST00000474572 LOC100130705A0A1B0GUX0 176 aa9.34□□□□□ -0.91
USP39-214ENST00000474572 A6NCN8 305 aa9.34□□□□□ -0.91
USP39-214ENST00000474572 LRIT2A6NDA9 550 aa9.34□□□□□ -0.91
USP39-214ENST00000474572 PRR23AA6NEV1 266 aa9.34□□□□□ -0.91
USP39-214ENST00000474572 POM121BA6NF01 834 aa9.34□□□□□ -0.91
USP39-214ENST00000474572 OR52A4PA6NMU1 304 aa9.34□□□□□ -0.91
USP39-214ENST00000474572 A8MVJ9 347 aa9.34□□□□□ -0.91
USP39-214ENST00000474572 SLC31A1O15431 190 aa9.34□□□□□ -0.91
USP39-214ENST00000474572 SUV39H1O43463 412 aa9.34□□□□□ -0.91
USP39-214ENST00000474572 OR1F1O43749 312 aa9.34□□□□□ -0.91
USP39-214ENST00000474572 HS6ST1O60243 411 aa9.34□□□□□ -0.91
USP39-214ENST00000474572 E2F6O75461 281 aa9.34□□□□□ -0.91
USP39-214ENST00000474572 JRKO75564 520 aa9.34□□□□□ -0.91
USP39-214ENST00000474572 IGLV3-19P01714 112 aa9.34□□□□□ -0.91
USP39-214ENST00000474572 C9P02748 559 aa9.34□□□□□ -0.91
USP39-214ENST00000474572 NTRK1P04629 796 aa9.34□□□□□ -0.91
USP39-214ENST00000474572 DRD2P14416 443 aa9.34□□□□□ -0.91
USP39-214ENST00000474572 GLULP15104 373 aa9.34□□□□□ -0.91
USP39-214ENST00000474572 NDUFV2P19404 249 aa9.34□□□□□ -0.91
USP39-214ENST00000474572 POU3F3P20264 500 aaPredicted RBP9.34□□□□□ -0.91
USP39-214ENST00000474572 HNRNPA2B1P22626 353 aaKnown RBP9.34□□□□□ -0.91
USP39-214ENST00000474572 MAT2AP31153 395 aaKnown RBP9.34□□□□□ -0.91
USP39-214ENST00000474572 TTKP33981 857 aa9.34□□□□□ -0.91
USP39-214ENST00000474572 BCL6P41182 706 aa9.34□□□□□ -0.91
USP39-214ENST00000474572 CRATP43155 626 aa9.34□□□□□ -0.91
USP39-214ENST00000474572 MAGEA8P43361 318 aa9.34□□□□□ -0.91
USP39-214ENST00000474572 TSFMP43897 325 aaKnown RBP9.34□□□□□ -0.91
USP39-214ENST00000474572 PXNP49023 591 aaPredicted RBP9.34□□□□□ -0.91
USP39-214ENST00000474572 CDK9P50750 372 aaKnown RBP9.34□□□□□ -0.91
USP39-214ENST00000474572 DAPP51397 102 aa9.34□□□□□ -0.91
USP39-214ENST00000474572 ISL1P61371 349 aa9.34□□□□□ -0.91
USP39-214ENST00000474572 YPEL5P62699 121 aa9.34□□□□□ -0.91
USP39-214ENST00000474572 CDK6Q00534 326 aa9.34□□□□□ -0.91
USP39-214ENST00000474572 ROR2Q01974 943 aaKnown RBP9.34□□□□□ -0.91
USP39-214ENST00000474572 GRSF1Q12849 480 aaKnown RBP eCLIP9.34□□□□□ -0.91
USP39-214ENST00000474572 PPP1R8Q12972 351 aaKnown RBP9.34□□□□□ -0.91
USP39-214ENST00000474572 TOP3AQ13472 1001 aaPredicted RBP9.34□□□□□ -0.91
USP39-214ENST00000474572 KEAP1Q14145 624 aa9.34□□□□□ -0.91
USP39-214ENST00000474572 ZBED5Q49AG3 693 aa9.34□□□□□ -0.91
USP39-214ENST00000474572 FBXO43Q4G163 708 aa9.34□□□□□ -0.91
USP39-214ENST00000474572 EOGTQ5NDL2 527 aa9.34□□□□□ -0.91
USP39-214ENST00000474572 OR4C11Q6IEV9 310 aa9.34□□□□□ -0.91
USP39-214ENST00000474572 LAIR2Q6ISS4 152 aa9.34□□□□□ -0.91
USP39-214ENST00000474572 ZNF773Q6PK81 442 aa9.34□□□□□ -0.91
USP39-214ENST00000474572 TMEM92Q6UXU6 159 aa9.34□□□□□ -0.91
USP39-214ENST00000474572 ZC3H7AQ8IWR0 971 aaKnown RBP9.34□□□□□ -0.91
USP39-214ENST00000474572 FBXL6Q8N531 539 aa9.34□□□□□ -0.91
USP39-214ENST00000474572 PIK3C3Q8NEB9 887 aa9.34□□□□□ -0.91
USP39-214ENST00000474572 ZNF555Q8NEP9 628 aa9.34□□□□□ -0.91
USP39-214ENST00000474572 OR2L3Q8NG85 312 aa9.34□□□□□ -0.91
USP39-214ENST00000474572 OR10Q1Q8NGQ4 319 aa9.34□□□□□ -0.91
USP39-214ENST00000474572 MAL2Q969L2 176 aa9.34□□□□□ -0.91
USP39-214ENST00000474572 TAMM41Q96BW9 452 aa9.34□□□□□ -0.91
USP39-214ENST00000474572 WDR92Q96MX6 357 aa9.34□□□□□ -0.91
USP39-214ENST00000474572 TEFMQ96QE5 360 aaKnown RBP9.34□□□□□ -0.91
USP39-214ENST00000474572 BARD1Q99728 777 aaKnown RBP9.34□□□□□ -0.91
USP39-214ENST00000474572 TUBA1CQ9BQE3 449 aa9.34□□□□□ -0.91
USP39-214ENST00000474572 PSD2Q9BQI7 771 aa9.34□□□□□ -0.91
USP39-214ENST00000474572 NPLQ9BXD5 320 aaPredicted RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms