RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 MFSD13AQ14CX5 517 aa17.84■□□□□ 0.45
ECHDC1-214ENST00000474289 RGNQ15493 299 aa17.84■□□□□ 0.45
ECHDC1-214ENST00000474289 IFI44LQ53G44 452 aa17.84■□□□□ 0.45
ECHDC1-214ENST00000474289 ZNF628Q5EBL2 1059 aa17.84■□□□□ 0.45
ECHDC1-214ENST00000474289 TEX261Q6UWH6 196 aa17.84■□□□□ 0.45
ECHDC1-214ENST00000474289 GPR142Q7Z601 462 aa17.84■□□□□ 0.45
ECHDC1-214ENST00000474289 ZNF598Q86UK7 904 aaKnown RBP17.84■□□□□ 0.45
ECHDC1-214ENST00000474289 NAGSQ8N159 534 aa17.84■□□□□ 0.45
ECHDC1-214ENST00000474289 AQP11Q8NBQ7 271 aa17.84■□□□□ 0.45
ECHDC1-214ENST00000474289 OR8J2Q8NGG1 315 aa17.84■□□□□ 0.45
ECHDC1-214ENST00000474289 PIH1D2Q8WWB5 315 aa17.84■□□□□ 0.45
ECHDC1-214ENST00000474289 KLHL6Q8WZ60 621 aa17.84■□□□□ 0.45
ECHDC1-214ENST00000474289 TMEM203Q969S6 136 aa17.84■□□□□ 0.45
ECHDC1-214ENST00000474289 AIFM2Q9BRQ8 373 aa17.84■□□□□ 0.45
ECHDC1-214ENST00000474289 ANKRA2Q9H9E1 313 aa17.84■□□□□ 0.45
ECHDC1-214ENST00000474289 FZD3Q9NPG1 666 aa17.84■□□□□ 0.45
ECHDC1-214ENST00000474289 B3GAT2Q9NPZ5 323 aa17.84■□□□□ 0.45
ECHDC1-214ENST00000474289 C11orf16Q9NQ32 467 aa17.84■□□□□ 0.45
ECHDC1-214ENST00000474289 LATS2Q9NRM7 1088 aa17.84■□□□□ 0.45
ECHDC1-214ENST00000474289 DNAJC27Q9NZQ0 273 aa17.84■□□□□ 0.45
ECHDC1-214ENST00000474289 SCML2Q9UQR0 700 aa17.84■□□□□ 0.45
ECHDC1-214ENST00000474289 SNX11Q9Y5W9 270 aa17.84■□□□□ 0.45
ECHDC1-214ENST00000474289 U3KQ87 197 aa17.84■□□□□ 0.45
ECHDC1-214ENST00000474289 KCNE1BA0A087WTH5 132 aa17.84■□□□□ 0.45
ECHDC1-214ENST00000474289 CIB4A0PJX0 185 aa17.84■□□□□ 0.45
ECHDC1-214ENST00000474289 PITPNM1O00562 1244 aa17.84■□□□□ 0.45
ECHDC1-214ENST00000474289 PLOD3O60568 738 aa17.84■□□□□ 0.45
ECHDC1-214ENST00000474289 PRKAR1AP10644 381 aa17.84■□□□□ 0.45
ECHDC1-214ENST00000474289 SDC2P34741 201 aa17.84■□□□□ 0.45
ECHDC1-214ENST00000474289 ETV3P41162 512 aa17.84■□□□□ 0.45
ECHDC1-214ENST00000474289 CRISP1P54107 249 aa17.84■□□□□ 0.45
ECHDC1-214ENST00000474289 ABATP80404 500 aa17.84■□□□□ 0.45
ECHDC1-214ENST00000474289 RGS1Q08116 209 aa17.84■□□□□ 0.45
ECHDC1-214ENST00000474289 MLLT11Q13015 90 aaPredicted RBP17.84■□□□□ 0.45
ECHDC1-214ENST00000474289 FRMPD2BQ6IN97 320 aa17.84■□□□□ 0.45
ECHDC1-214ENST00000474289 METTL2BQ6P1Q9 378 aaKnown RBP17.84■□□□□ 0.45
ECHDC1-214ENST00000474289 TMEM65Q6PI78 240 aa17.84■□□□□ 0.45
ECHDC1-214ENST00000474289 C11orf65Q8NCR3 313 aa17.84■□□□□ 0.45
ECHDC1-214ENST00000474289 FAM46DQ8NEK8 389 aa17.84■□□□□ 0.45
ECHDC1-214ENST00000474289 CSGALNACT1Q8TDX6 532 aa17.84■□□□□ 0.45
ECHDC1-214ENST00000474289 ACER3Q9NUN7 267 aa17.84■□□□□ 0.45
ECHDC1-214ENST00000474289 MALT1Q9UDY8 824 aa17.84■□□□□ 0.45
ECHDC1-214ENST00000474289 ST3GAL5Q9UNP4 418 aa17.84■□□□□ 0.45
ECHDC1-214ENST00000474289 SLC43A1O75387 559 aa17.83■□□□□ 0.45
ECHDC1-214ENST00000474289 CHRM5P08912 532 aaPredicted RBP17.83■□□□□ 0.45
ECHDC1-214ENST00000474289 C1SP09871 688 aa17.83■□□□□ 0.45
ECHDC1-214ENST00000474289 SOX9P48436 509 aa17.83■□□□□ 0.45
ECHDC1-214ENST00000474289 GAB1Q13480 694 aa17.83■□□□□ 0.45
ECHDC1-214ENST00000474289 P2RY14Q15391 338 aa17.83■□□□□ 0.45
ECHDC1-214ENST00000474289 ANKRD54Q6NXT1 300 aa17.83■□□□□ 0.45
ECHDC1-214ENST00000474289 SERPINA9Q86WD7 417 aa17.83■□□□□ 0.45
ECHDC1-214ENST00000474289 SDR16C5Q8N3Y7 309 aa17.83■□□□□ 0.45
ECHDC1-214ENST00000474289 NANOGP1Q8N7R0 232 aa17.83■□□□□ 0.45
ECHDC1-214ENST00000474289 EID2BQ96D98 161 aa17.83■□□□□ 0.45
ECHDC1-214ENST00000474289 MAGEB10Q96LZ2 347 aaPredicted RBP17.83■□□□□ 0.45
ECHDC1-214ENST00000474289 GPR137Q96N19 417 aa17.83■□□□□ 0.45
ECHDC1-214ENST00000474289 SPON2Q9BUD6 331 aa17.83■□□□□ 0.45
ECHDC1-214ENST00000474289 PPIL3Q9H2H8 161 aaKnown RBP17.83■□□□□ 0.45
ECHDC1-214ENST00000474289 AP1M2Q9Y6Q5 423 aa17.83■□□□□ 0.45
ECHDC1-214ENST00000474289 LOC102723532A0A0G2JNH3 316 aa17.83■□□□□ 0.44
ECHDC1-214ENST00000474289 C1orf226A1L170 272 aa17.83■□□□□ 0.44
ECHDC1-214ENST00000474289 FABP7O15540 132 aa17.83■□□□□ 0.44
ECHDC1-214ENST00000474289 ORC5O43913 435 aa17.83■□□□□ 0.44
ECHDC1-214ENST00000474289 RFPL3O75679 317 aa17.83■□□□□ 0.44
ECHDC1-214ENST00000474289 ZNF7P17097 686 aaPredicted RBP17.83■□□□□ 0.44
ECHDC1-214ENST00000474289 FEN1P39748 380 aaKnown RBP17.83■□□□□ 0.44
ECHDC1-214ENST00000474289 BOP1Q14137 746 aaKnown RBP17.83■□□□□ 0.44
ECHDC1-214ENST00000474289 GANABQ14697 944 aaKnown RBP17.83■□□□□ 0.44
ECHDC1-214ENST00000474289 TEAD4Q15561 434 aa17.83■□□□□ 0.44
ECHDC1-214ENST00000474289 GPR162Q16538 588 aa17.83■□□□□ 0.44
ECHDC1-214ENST00000474289 CD300LGQ6UXG3 332 aa17.83■□□□□ 0.44
ECHDC1-214ENST00000474289 ANKS3Q6ZW76 656 aa17.83■□□□□ 0.44
ECHDC1-214ENST00000474289 TLK2Q86UE8 772 aa17.83■□□□□ 0.44
ECHDC1-214ENST00000474289 PDZD3Q86UT5 571 aa17.83■□□□□ 0.44
ECHDC1-214ENST00000474289 TIGD4Q8IY51 512 aa17.83■□□□□ 0.44
ECHDC1-214ENST00000474289 DTX3Q8N9I9 347 aa17.83■□□□□ 0.44
ECHDC1-214ENST00000474289 TMEM145Q8NBT3 493 aa17.83■□□□□ 0.44
ECHDC1-214ENST00000474289 SLC37A3Q8NCC5 494 aa17.83■□□□□ 0.44
ECHDC1-214ENST00000474289 ZNF680Q8NEM1 530 aa17.83■□□□□ 0.44
ECHDC1-214ENST00000474289 AKAP1Q92667 903 aaKnown RBP eCLIP17.83■□□□□ 0.44
ECHDC1-214ENST00000474289 AP2M1Q96CW1 435 aa17.83■□□□□ 0.44
ECHDC1-214ENST00000474289 SAMD11Q96NU1 681 aa17.83■□□□□ 0.44
ECHDC1-214ENST00000474289 NELL2Q99435 816 aa17.83■□□□□ 0.44
ECHDC1-214ENST00000474289 TCF25Q9BQ70 676 aa17.83■□□□□ 0.44
ECHDC1-214ENST00000474289 SLC32A1Q9H598 525 aa17.83■□□□□ 0.44
ECHDC1-214ENST00000474289 PPP1R3EQ9H7J1 279 aa17.83■□□□□ 0.44
ECHDC1-214ENST00000474289 EVA1BQ9NVM1 165 aa17.83■□□□□ 0.44
ECHDC1-214ENST00000474289 STOML2Q9UJZ1 356 aa17.83■□□□□ 0.44
ECHDC1-214ENST00000474289 PRAMEF12O95522 483 aa17.82■□□□□ 0.44
ECHDC1-214ENST00000474289 GASTP01350 101 aa17.82■□□□□ 0.44
ECHDC1-214ENST00000474289 ATF4P18848 351 aaPredicted RBP17.82■□□□□ 0.44
ECHDC1-214ENST00000474289 LIMS1P48059 325 aa17.82■□□□□ 0.44
ECHDC1-214ENST00000474289 CASP9P55211 416 aa17.82■□□□□ 0.44
ECHDC1-214ENST00000474289 RAB25P57735 213 aa17.82■□□□□ 0.44
ECHDC1-214ENST00000474289 FAM151BQ6UXP7 276 aa17.82■□□□□ 0.44
ECHDC1-214ENST00000474289 TMIGD1Q6UXZ0 262 aa17.82■□□□□ 0.44
ECHDC1-214ENST00000474289 GPR65Q8IYL9 337 aa17.82■□□□□ 0.44
ECHDC1-214ENST00000474289 ZBTB2Q8N680 514 aa17.82■□□□□ 0.44
ECHDC1-214ENST00000474289 C2orf69Q8N8R5 385 aa17.82■□□□□ 0.44
ECHDC1-214ENST00000474289 MSANTD3Q96H12 275 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms