RNA–Protein interactions for RNA: ENST00000474042.5

COPS7B-219, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-219ENST00000474042 TMEM52Q8NDY8 209 aa12.47□□□□□ -0.41
COPS7B-219ENST00000474042 TTLQ8NG68 377 aa12.47□□□□□ -0.41
COPS7B-219ENST00000474042 CA5BP1Q8WTZ4 195 aa12.47□□□□□ -0.41
COPS7B-219ENST00000474042 CHTF18Q8WVB6 975 aa12.47□□□□□ -0.41
COPS7B-219ENST00000474042 NCLNQ969V3 563 aa12.47□□□□□ -0.41
COPS7B-219ENST00000474042 MS4A6EQ96DS6 147 aa12.47□□□□□ -0.41
COPS7B-219ENST00000474042 SEC16BQ96JE7 1060 aa12.47□□□□□ -0.41
COPS7B-219ENST00000474042 ADAP2Q9NPF8 381 aa12.47□□□□□ -0.41
COPS7B-219ENST00000474042 PRTFDC1Q9NRG1 225 aa12.47□□□□□ -0.41
COPS7B-219ENST00000474042 COQ3Q9NZJ6 369 aa12.47□□□□□ -0.41
COPS7B-219ENST00000474042 HRH3Q9Y5N1 445 aa12.47□□□□□ -0.41
COPS7B-219ENST00000474042 MED13LQ71F56 2210 aa12.47□□□□□ -0.41
COPS7B-219ENST00000474042 INTS1Q8N201 2190 aaKnown RBP12.46□□□□□ -0.41
COPS7B-219ENST00000474042 A0A0G2JN53 185 aa12.46□□□□□ -0.41
COPS7B-219ENST00000474042 LRIT2A6NDA9 550 aa12.46□□□□□ -0.41
COPS7B-219ENST00000474042 SYNDIG1LA6NDD5 238 aa12.46□□□□□ -0.41
COPS7B-219ENST00000474042 TMEM200CA6NKL6 621 aa12.46□□□□□ -0.41
COPS7B-219ENST00000474042 TP73O15350 636 aa12.46□□□□□ -0.41
COPS7B-219ENST00000474042 ERI3O43414 337 aaKnown RBP12.46□□□□□ -0.41
COPS7B-219ENST00000474042 PRKNO60260 465 aaPredicted RBP12.46□□□□□ -0.41
COPS7B-219ENST00000474042 WDR47O94967 919 aa12.46□□□□□ -0.41
COPS7B-219ENST00000474042 WISP3O95389 354 aaPredicted RBP12.46□□□□□ -0.41
COPS7B-219ENST00000474042 TPOP07202 933 aa12.46□□□□□ -0.41
COPS7B-219ENST00000474042 C1GALT1C1LP0DN25 315 aa12.46□□□□□ -0.41
COPS7B-219ENST00000474042 GNAZP19086 355 aa12.46□□□□□ -0.41
COPS7B-219ENST00000474042 SSR4P51571 173 aa12.46□□□□□ -0.41
COPS7B-219ENST00000474042 TAS2R39P59534 338 aa12.46□□□□□ -0.41
COPS7B-219ENST00000474042 GPR85P60893 370 aa12.46□□□□□ -0.41
COPS7B-219ENST00000474042 TLE4Q04727 773 aa12.46□□□□□ -0.41
COPS7B-219ENST00000474042 TFF3Q07654 80 aa12.46□□□□□ -0.41
COPS7B-219ENST00000474042 MGAT5Q09328 741 aa12.46□□□□□ -0.41
COPS7B-219ENST00000474042 TSNQ15631 228 aaKnown RBP12.46□□□□□ -0.41
COPS7B-219ENST00000474042 ADPRMQ3LIE5 342 aa12.46□□□□□ -0.41
COPS7B-219ENST00000474042 TMIGD1Q6UXZ0 262 aa12.46□□□□□ -0.41
COPS7B-219ENST00000474042 VN1R5Q7Z5H4 357 aa12.46□□□□□ -0.41
COPS7B-219ENST00000474042 CDH24Q86UP0 819 aa12.46□□□□□ -0.41
COPS7B-219ENST00000474042 TMEM156Q8N614 296 aa12.46□□□□□ -0.41
COPS7B-219ENST00000474042 FAM47BQ8NA70 645 aa12.46□□□□□ -0.41
COPS7B-219ENST00000474042 ANKRD49Q8WVL7 239 aa12.46□□□□□ -0.41
COPS7B-219ENST00000474042 RHBDF1Q96CC6 855 aa12.46□□□□□ -0.41
COPS7B-219ENST00000474042 EGFL8Q99944 293 aa12.46□□□□□ -0.41
COPS7B-219ENST00000474042 MCMBPQ9BTE3 642 aa12.46□□□□□ -0.41
COPS7B-219ENST00000474042 NT5DC2Q9H857 520 aa12.46□□□□□ -0.41
COPS7B-219ENST00000474042 MCCC2Q9HCC0 563 aa12.46□□□□□ -0.41
COPS7B-219ENST00000474042 NPDC1Q9NQX5 325 aaPredicted RBP12.46□□□□□ -0.41
COPS7B-219ENST00000474042 PNO1Q9NRX1 252 aaKnown RBP12.46□□□□□ -0.41
COPS7B-219ENST00000474042 DEPPQ9NTK1 212 aa12.46□□□□□ -0.41
COPS7B-219ENST00000474042 FBXW2Q9UKT8 454 aa12.46□□□□□ -0.41
COPS7B-219ENST00000474042 DNAJC13O75165 2243 aa12.46□□□□□ -0.42
COPS7B-219ENST00000474042 EML6Q6ZMW3 1958 aa12.45□□□□□ -0.42
COPS7B-219ENST00000474042 FANCGO15287 622 aa12.45□□□□□ -0.42
COPS7B-219ENST00000474042 CDC40O60508 579 aaKnown RBP eCLIP12.45□□□□□ -0.42
COPS7B-219ENST00000474042 CLEC3AO75596 197 aa12.45□□□□□ -0.42
COPS7B-219ENST00000474042 ZFAND5O76080 213 aa12.45□□□□□ -0.42
COPS7B-219ENST00000474042 TUBB4AP04350 444 aa12.45□□□□□ -0.42
COPS7B-219ENST00000474042 GDF5P43026 501 aa12.45□□□□□ -0.42
COPS7B-219ENST00000474042 ELAVL1Q15717 326 aaKnown RBP12.45□□□□□ -0.42
COPS7B-219ENST00000474042 C18orf21Q32NC0 220 aaPredicted RBP12.45□□□□□ -0.42
COPS7B-219ENST00000474042 ARHGAP11AQ6P4F7 1023 aa12.45□□□□□ -0.42
COPS7B-219ENST00000474042 SYDE1Q6ZW31 735 aaPredicted RBP12.45□□□□□ -0.42
COPS7B-219ENST00000474042 FRA10AC1Q70Z53 315 aa12.45□□□□□ -0.42
COPS7B-219ENST00000474042 ZNF595Q8IYB9 648 aa12.45□□□□□ -0.42
COPS7B-219ENST00000474042 PSD4Q8NDX1 1056 aa12.45□□□□□ -0.42
COPS7B-219ENST00000474042 OR2L5Q8NG80 312 aa12.45□□□□□ -0.42
COPS7B-219ENST00000474042 OR52N2Q8NGI0 321 aa12.45□□□□□ -0.42
COPS7B-219ENST00000474042 ASB5Q8WWX0 329 aa12.45□□□□□ -0.42
COPS7B-219ENST00000474042 FAR2Q96K12 515 aa12.45□□□□□ -0.42
COPS7B-219ENST00000474042 CSF3RQ99062 836 aa12.45□□□□□ -0.42
COPS7B-219ENST00000474042 CCDC77Q9BR77 488 aa12.45□□□□□ -0.42
COPS7B-219ENST00000474042 TMEM79Q9BSE2 394 aa12.45□□□□□ -0.42
COPS7B-219ENST00000474042 PITHD1Q9GZP4 211 aaPredicted RBP12.45□□□□□ -0.42
COPS7B-219ENST00000474042 TP63Q9H3D4 680 aaPredicted RBP12.45□□□□□ -0.42
COPS7B-219ENST00000474042 RHOJQ9H4E5 214 aa12.45□□□□□ -0.42
COPS7B-219ENST00000474042 POPDC3Q9HBV1 291 aa12.45□□□□□ -0.42
COPS7B-219ENST00000474042 TIMMDC1Q9NPL8 285 aa12.45□□□□□ -0.42
COPS7B-219ENST00000474042 MOCS1Q9NZB8 636 aa12.45□□□□□ -0.42
COPS7B-219ENST00000474042 GPRC5BQ9NZH0 403 aa12.45□□□□□ -0.42
COPS7B-219ENST00000474042 KCMF1Q9P0J7 381 aa12.45□□□□□ -0.42
COPS7B-219ENST00000474042 CTNNAL1Q9UBT7 734 aa12.45□□□□□ -0.42
COPS7B-219ENST00000474042 ITGB1BP2Q9UKP3 347 aa12.45□□□□□ -0.42
COPS7B-219ENST00000474042 YARS2Q9Y2Z4 477 aaKnown RBP12.45□□□□□ -0.42
COPS7B-219ENST00000474042 A0A088AWK7 358 aa12.44□□□□□ -0.42
COPS7B-219ENST00000474042 A0A0G2JMM0 328 aa12.44□□□□□ -0.42
COPS7B-219ENST00000474042 A0A1W2PPB8 328 aa12.44□□□□□ -0.42
COPS7B-219ENST00000474042 A0A1W2PRS3 328 aa12.44□□□□□ -0.42
COPS7B-219ENST00000474042 PINLYPA6NC86 204 aa12.44□□□□□ -0.42
COPS7B-219ENST00000474042 KIR3DP1A8MWS1 328 aa12.44□□□□□ -0.42
COPS7B-219ENST00000474042 E7ESA3 106 aa12.44□□□□□ -0.42
COPS7B-219ENST00000474042 CYR61O00622 381 aa12.44□□□□□ -0.42
COPS7B-219ENST00000474042 CLDN4O14493 209 aa12.44□□□□□ -0.42
COPS7B-219ENST00000474042 B3GALT2O43825 422 aa12.44□□□□□ -0.42
COPS7B-219ENST00000474042 PRAMEF4O60810 478 aa12.44□□□□□ -0.42
COPS7B-219ENST00000474042 SEC31AO94979 1220 aaKnown RBP12.44□□□□□ -0.42
COPS7B-219ENST00000474042 OR6B1O95007 311 aa12.44□□□□□ -0.42
COPS7B-219ENST00000474042 ZNF10P21506 573 aaPredicted RBP12.44□□□□□ -0.42
COPS7B-219ENST00000474042 SAT1P21673 171 aa12.44□□□□□ -0.42
COPS7B-219ENST00000474042 CERS1P27544 350 aa12.44□□□□□ -0.42
COPS7B-219ENST00000474042 CHRNB4P30926 498 aa12.44□□□□□ -0.42
COPS7B-219ENST00000474042 NR0B1P51843 470 aaKnown RBP12.44□□□□□ -0.42
COPS7B-219ENST00000474042 ARL4CP56559 192 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms