RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 TRAF3Q13114 568 aa12.97□□□□□ -0.33
USF1-205ENST00000473969 SGO1Q5FBB7 561 aa12.97□□□□□ -0.33
USF1-205ENST00000473969 LIPMQ5VYY2 423 aa12.97□□□□□ -0.33
USF1-205ENST00000473969 OR4C11Q6IEV9 310 aa12.97□□□□□ -0.33
USF1-205ENST00000473969 PCSK4Q6UW60 755 aa12.97□□□□□ -0.33
USF1-205ENST00000473969 LRIG3Q6UXM1 1119 aa12.97□□□□□ -0.33
USF1-205ENST00000473969 CA13Q8N1Q1 262 aa12.97□□□□□ -0.33
USF1-205ENST00000473969 GALNT16Q8N428 558 aa12.97□□□□□ -0.33
USF1-205ENST00000473969 PLPP5Q8NEB5 264 aa12.97□□□□□ -0.33
USF1-205ENST00000473969 OR11G2Q8NGC1 345 aa12.97□□□□□ -0.33
USF1-205ENST00000473969 SELENOMQ8WWX9 145 aa12.97□□□□□ -0.33
USF1-205ENST00000473969 C8orf44Q96CB5 159 aa12.97□□□□□ -0.33
USF1-205ENST00000473969 PTCHD1Q96NR3 888 aa12.97□□□□□ -0.33
USF1-205ENST00000473969 ZIM3Q96PE6 472 aa12.97□□□□□ -0.33
USF1-205ENST00000473969 ZNF382Q96SR6 550 aa12.97□□□□□ -0.33
USF1-205ENST00000473969 TRIM55Q9BYV6 548 aa12.97□□□□□ -0.33
USF1-205ENST00000473969 RIC8BQ9NVN3 520 aa12.97□□□□□ -0.33
USF1-205ENST00000473969 GPR83Q9NYM4 423 aa12.97□□□□□ -0.33
USF1-205ENST00000473969 AHSPQ9NZD4 102 aa12.97□□□□□ -0.33
USF1-205ENST00000473969 ITPR1Q14643 2758 aa12.96□□□□□ -0.33
USF1-205ENST00000473969 C4orf51C9J302 202 aa12.96□□□□□ -0.33
USF1-205ENST00000473969 G3V2L1 256 aa12.96□□□□□ -0.33
USF1-205ENST00000473969 H3BQF6 201 aa12.96□□□□□ -0.33
USF1-205ENST00000473969 CTIFO43310 598 aaKnown RBP12.96□□□□□ -0.33
USF1-205ENST00000473969 OR4F21O95013 312 aa12.96□□□□□ -0.33
USF1-205ENST00000473969 ALPPP05187 535 aa12.96□□□□□ -0.33
USF1-205ENST00000473969 HIST1H1TP22492 207 aaPredicted RBP12.96□□□□□ -0.33
USF1-205ENST00000473969 ATP5A1P25705 553 aaKnown RBP12.96□□□□□ -0.33
USF1-205ENST00000473969 CERS1P27544 350 aa12.96□□□□□ -0.33
USF1-205ENST00000473969 ARFIP1P53367 373 aa12.96□□□□□ -0.33
USF1-205ENST00000473969 NAGLUP54802 743 aa12.96□□□□□ -0.33
USF1-205ENST00000473969 RAB38P57729 211 aa12.96□□□□□ -0.33
USF1-205ENST00000473969 CUL3Q13618 768 aa12.96□□□□□ -0.33
USF1-205ENST00000473969 RUNX2Q13950 521 aa12.96□□□□□ -0.33
USF1-205ENST00000473969 ABRAXAS2Q15018 415 aa12.96□□□□□ -0.33
USF1-205ENST00000473969 LACTB2Q53H82 288 aaPredicted RBP12.96□□□□□ -0.33
USF1-205ENST00000473969 TCTN3Q6NUS6 607 aa12.96□□□□□ -0.33
USF1-205ENST00000473969 TMEM205Q6UW68 189 aa12.96□□□□□ -0.33
USF1-205ENST00000473969 CPEB2Q7Z5Q1 589 aaKnown RBP12.96□□□□□ -0.33
USF1-205ENST00000473969 TMEM151BQ8IW70 566 aa12.96□□□□□ -0.33
USF1-205ENST00000473969 PARP9Q8IXQ6 854 aa12.96□□□□□ -0.33
USF1-205ENST00000473969 KBTBD2Q8IY47 623 aa12.96□□□□□ -0.33
USF1-205ENST00000473969 IQCKQ8N0W5 287 aa12.96□□□□□ -0.33
USF1-205ENST00000473969 CDYL2Q8N8U2 506 aa12.96□□□□□ -0.33
USF1-205ENST00000473969 ACOT4Q8N9L9 421 aa12.96□□□□□ -0.33
USF1-205ENST00000473969 WDR20Q8TBZ3 569 aa12.96□□□□□ -0.33
USF1-205ENST00000473969 METTL6Q8TCB7 284 aa12.96□□□□□ -0.33
USF1-205ENST00000473969 QRFPRQ96P65 431 aa12.96□□□□□ -0.33
USF1-205ENST00000473969 BBC3Q96PG8 261 aaPredicted RBP12.96□□□□□ -0.33
USF1-205ENST00000473969 FAM111AQ96PZ2 611 aa12.96□□□□□ -0.33
USF1-205ENST00000473969 SLC29A3Q9BZD2 475 aa12.96□□□□□ -0.33
USF1-205ENST00000473969 AICDAQ9GZX7 198 aa12.96□□□□□ -0.33
USF1-205ENST00000473969 C12orf65Q9H3J6 166 aaKnown RBP12.96□□□□□ -0.33
USF1-205ENST00000473969 ZNF160Q9HCG1 818 aa12.96□□□□□ -0.33
USF1-205ENST00000473969 LYRM4Q9HD34 91 aa12.96□□□□□ -0.33
USF1-205ENST00000473969 PRDM7Q9NQW5 492 aa12.96□□□□□ -0.33
USF1-205ENST00000473969 ZNF71Q9NQZ8 489 aaPredicted RBP12.96□□□□□ -0.33
USF1-205ENST00000473969 ARGLU1Q9NWB6 273 aaPredicted RBP12.96□□□□□ -0.33
USF1-205ENST00000473969 OXSMQ9NWU1 459 aa12.96□□□□□ -0.33
USF1-205ENST00000473969 ZNF451Q9Y4E5 1061 aa12.96□□□□□ -0.33
USF1-205ENST00000473969 MMACHCQ9Y4U1 282 aa12.96□□□□□ -0.33
USF1-205ENST00000473969 PCDHGB7Q9Y5F8 929 aa12.96□□□□□ -0.33
USF1-205ENST00000473969 PCDHGA9Q9Y5G4 932 aaKnown RBP12.96□□□□□ -0.33
USF1-205ENST00000473969 HEMK1Q9Y5R4 338 aaPredicted RBP12.96□□□□□ -0.33
USF1-205ENST00000473969 FER1L5A0AVI2 2057 aa12.96□□□□□ -0.33
USF1-205ENST00000473969 IGHV1-45A0A0A0MS14 117 aa12.95□□□□□ -0.34
USF1-205ENST00000473969 ARHGAP10A1A4S6 786 aa12.95□□□□□ -0.34
USF1-205ENST00000473969 SYNDIG1LA6NDD5 238 aa12.95□□□□□ -0.34
USF1-205ENST00000473969 RTCAO00442 366 aaKnown RBP12.95□□□□□ -0.34
USF1-205ENST00000473969 PPP6CO00743 305 aa12.95□□□□□ -0.34
USF1-205ENST00000473969 TRIM13O60858 407 aa12.95□□□□□ -0.34
USF1-205ENST00000473969 DNAJB6O75190 326 aa12.95□□□□□ -0.34
USF1-205ENST00000473969 TBX6O95947 436 aaPredicted RBP12.95□□□□□ -0.34
USF1-205ENST00000473969 ENO1P06733 434 aaKnown RBP12.95□□□□□ -0.34
USF1-205ENST00000473969 TLX1P31314 330 aaPredicted RBP12.95□□□□□ -0.34
USF1-205ENST00000473969 LIM2P55344 173 aa12.95□□□□□ -0.34
USF1-205ENST00000473969 OR4D2P58180 307 aa12.95□□□□□ -0.34
USF1-205ENST00000473969 NFATC3Q12968 1075 aa12.95□□□□□ -0.34
USF1-205ENST00000473969 SLC13A2Q13183 592 aa12.95□□□□□ -0.34
USF1-205ENST00000473969 SLAMF1Q13291 335 aa12.95□□□□□ -0.34
USF1-205ENST00000473969 LETMD1Q6P1Q0 360 aa12.95□□□□□ -0.34
USF1-205ENST00000473969 CYP20A1Q6UW02 462 aa12.95□□□□□ -0.34
USF1-205ENST00000473969 QSOX2Q6ZRP7 698 aa12.95□□□□□ -0.34
USF1-205ENST00000473969 ASB18Q6ZVZ8 466 aa12.95□□□□□ -0.34
USF1-205ENST00000473969 PAGE2Q7Z2X7 111 aa12.95□□□□□ -0.34
USF1-205ENST00000473969 HOMEZQ8IX15 550 aa12.95□□□□□ -0.34
USF1-205ENST00000473969 ZNF595Q8IYB9 648 aa12.95□□□□□ -0.34
USF1-205ENST00000473969 RNF175Q8N4F7 328 aa12.95□□□□□ -0.34
USF1-205ENST00000473969 C7orf57Q8NEG2 295 aa12.95□□□□□ -0.34
USF1-205ENST00000473969 TCP10LQ8TDR4 215 aa12.95□□□□□ -0.34
USF1-205ENST00000473969 TUBB6Q9BUF5 446 aa12.95□□□□□ -0.34
USF1-205ENST00000473969 LHPPQ9H008 270 aa12.95□□□□□ -0.34
USF1-205ENST00000473969 ZNF700Q9H0M5 742 aa12.95□□□□□ -0.34
USF1-205ENST00000473969 MID1IP1Q9NPA3 183 aa12.95□□□□□ -0.34
USF1-205ENST00000473969 PRDM9Q9NQV7 894 aa12.95□□□□□ -0.34
USF1-205ENST00000473969 PRTFDC1Q9NRG1 225 aa12.95□□□□□ -0.34
USF1-205ENST00000473969 LANCL2Q9NS86 450 aa12.95□□□□□ -0.34
USF1-205ENST00000473969 MS4A12Q9NXJ0 267 aa12.95□□□□□ -0.34
USF1-205ENST00000473969 FBXW2Q9UKT8 454 aa12.95□□□□□ -0.34
USF1-205ENST00000473969 PPT2Q9UMR5 302 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms