RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 C19orf25Q9UFG5 118 aaPredicted RBP17.8■□□□□ 0.44
PTCD3-210ENST00000473829 PCDHGA11Q9Y5H2 935 aa17.8■□□□□ 0.44
PTCD3-210ENST00000473829 CSAG2Q9Y5P2 127 aa17.8■□□□□ 0.44
PTCD3-210ENST00000473829 IGKV3D-11A0A0A0MRZ8 115 aa17.79■□□□□ 0.44
PTCD3-210ENST00000473829 TGFBR3LH3BV60 316 aa17.79■□□□□ 0.44
PTCD3-210ENST00000473829 PSMD12O00232 456 aaPredicted RBP17.79■□□□□ 0.44
PTCD3-210ENST00000473829 DPM1O60762 260 aa17.79■□□□□ 0.44
PTCD3-210ENST00000473829 CDH16O75309 829 aa17.79■□□□□ 0.44
PTCD3-210ENST00000473829 CLDN9O95484 217 aa17.79■□□□□ 0.44
PTCD3-210ENST00000473829 ETHE1O95571 254 aa17.79■□□□□ 0.44
PTCD3-210ENST00000473829 ALPPP05187 535 aa17.79■□□□□ 0.44
PTCD3-210ENST00000473829 SERPINA7P05543 415 aa17.79■□□□□ 0.44
PTCD3-210ENST00000473829 NUDT17P0C025 328 aa17.79■□□□□ 0.44
PTCD3-210ENST00000473829 ITGAMP11215 1152 aa17.79■□□□□ 0.44
PTCD3-210ENST00000473829 KRT15P19012 456 aa17.79■□□□□ 0.44
PTCD3-210ENST00000473829 HPDP32754 393 aaPredicted RBP17.79■□□□□ 0.44
PTCD3-210ENST00000473829 ARL1P40616 181 aaPredicted RBP17.79■□□□□ 0.44
PTCD3-210ENST00000473829 PIK3CBP42338 1070 aa17.79■□□□□ 0.44
PTCD3-210ENST00000473829 NEK2P51955 445 aa17.79■□□□□ 0.44
PTCD3-210ENST00000473829 CCNG1P51959 295 aa17.79■□□□□ 0.44
PTCD3-210ENST00000473829 LIM2P55344 173 aa17.79■□□□□ 0.44
PTCD3-210ENST00000473829 RAB38P57729 211 aa17.79■□□□□ 0.44
PTCD3-210ENST00000473829 RPS13P62277 151 aaKnown RBP17.79■□□□□ 0.44
PTCD3-210ENST00000473829 HERVK_113P63132 956 aa17.79■□□□□ 0.44
PTCD3-210ENST00000473829 TLE1Q04724 770 aa17.79■□□□□ 0.44
PTCD3-210ENST00000473829 TMEM35AQ53FP2 167 aa17.79■□□□□ 0.44
PTCD3-210ENST00000473829 UNC50Q53HI1 259 aa17.79■□□□□ 0.44
PTCD3-210ENST00000473829 SLC6A19Q695T7 634 aa17.79■□□□□ 0.44
PTCD3-210ENST00000473829 EMBQ6PCB8 327 aa17.79■□□□□ 0.44
PTCD3-210ENST00000473829 IGFL3Q6UXB1 125 aa17.79■□□□□ 0.44
PTCD3-210ENST00000473829 Q8NA96 180 aa17.79■□□□□ 0.44
PTCD3-210ENST00000473829 OR4F6Q8NGB9 312 aa17.79■□□□□ 0.44
PTCD3-210ENST00000473829 BRIX1Q8TDN6 353 aaKnown RBP17.79■□□□□ 0.44
PTCD3-210ENST00000473829 ATP6V1E2Q96A05 226 aa17.79■□□□□ 0.44
PTCD3-210ENST00000473829 PTCHD1Q96NR3 888 aa17.79■□□□□ 0.44
PTCD3-210ENST00000473829 KCNC2Q96PR1 638 aa17.79■□□□□ 0.44
PTCD3-210ENST00000473829 ERVK-6Q9BXR3 956 aa17.79■□□□□ 0.44
PTCD3-210ENST00000473829 C12orf65Q9H3J6 166 aaKnown RBP17.79■□□□□ 0.44
PTCD3-210ENST00000473829 COPS7BQ9H9Q2 264 aaPredicted RBP17.79■□□□□ 0.44
PTCD3-210ENST00000473829 PRM3Q9NNZ6 103 aa17.79■□□□□ 0.44
PTCD3-210ENST00000473829 CLDN16Q9Y5I7 305 aa17.79■□□□□ 0.44
PTCD3-210ENST00000473829 HELZ2Q9BYK8 2649 aaKnown RBP17.79■□□□□ 0.44
PTCD3-210ENST00000473829 A0A088AWK7 358 aa17.78■□□□□ 0.44
PTCD3-210ENST00000473829 PRMT3O60678 531 aa17.78■□□□□ 0.44
PTCD3-210ENST00000473829 GLRA3O75311 464 aa17.78■□□□□ 0.44
PTCD3-210ENST00000473829 SORBS2O94875 1100 aaKnown RBP17.78■□□□□ 0.44
PTCD3-210ENST00000473829 SCELO95171 688 aa17.78■□□□□ 0.44
PTCD3-210ENST00000473829 TAC1P20366 129 aa17.78■□□□□ 0.44
PTCD3-210ENST00000473829 ZNF10P21506 573 aaPredicted RBP17.78■□□□□ 0.44
PTCD3-210ENST00000473829 ATP5F1P24539 256 aaPredicted RBP17.78■□□□□ 0.44
PTCD3-210ENST00000473829 ATP5A1P25705 553 aaKnown RBP17.78■□□□□ 0.44
PTCD3-210ENST00000473829 SOX11P35716 441 aa17.78■□□□□ 0.44
PTCD3-210ENST00000473829 TGM3Q08188 693 aa17.78■□□□□ 0.44
PTCD3-210ENST00000473829 ZNF678Q5SXM1 525 aa17.78■□□□□ 0.44
PTCD3-210ENST00000473829 DEPDC1Q5TB30 811 aa17.78■□□□□ 0.44
PTCD3-210ENST00000473829 AGAP7PQ5VUJ5 663 aa17.78■□□□□ 0.44
PTCD3-210ENST00000473829 JMJD6Q6NYC1 403 aaPredicted RBP17.78■□□□□ 0.44
PTCD3-210ENST00000473829 LETMD1Q6P1Q0 360 aa17.78■□□□□ 0.44
PTCD3-210ENST00000473829 PAPD4Q6PIY7 484 aaKnown RBP17.78■□□□□ 0.44
PTCD3-210ENST00000473829 IGFL2Q6UWQ7 119 aa17.78■□□□□ 0.44
PTCD3-210ENST00000473829 HPS6Q86YV9 775 aa17.78■□□□□ 0.44
PTCD3-210ENST00000473829 SCUBE1Q8IWY4 988 aa17.78■□□□□ 0.44
PTCD3-210ENST00000473829 SIRT6Q8N6T7 355 aa17.78■□□□□ 0.44
PTCD3-210ENST00000473829 ACOT4Q8N9L9 421 aa17.78■□□□□ 0.44
PTCD3-210ENST00000473829 AGAP4Q96P64 663 aa17.78■□□□□ 0.44
PTCD3-210ENST00000473829 TBCDQ9BTW9 1192 aa17.78■□□□□ 0.44
PTCD3-210ENST00000473829 ZNF717Q9BY31 904 aaPredicted RBP17.78■□□□□ 0.44
PTCD3-210ENST00000473829 PRDM9Q9NQV7 894 aa17.78■□□□□ 0.44
PTCD3-210ENST00000473829 KCMF1Q9P0J7 381 aa17.78■□□□□ 0.44
PTCD3-210ENST00000473829 DCDC2Q9UHG0 476 aa17.78■□□□□ 0.44
PTCD3-210ENST00000473829 ADGRE2Q9UHX3 823 aa17.78■□□□□ 0.44
PTCD3-210ENST00000473829 ZNF225Q9UK10 706 aa17.78■□□□□ 0.44
PTCD3-210ENST00000473829 DAPP1Q9UN19 280 aa17.78■□□□□ 0.44
PTCD3-210ENST00000473829 TCRBV16S1A1N1A0A5B0 115 aa17.77■□□□□ 0.44
PTCD3-210ENST00000473829 TLDC2A0PJX2 215 aa17.77■□□□□ 0.44
PTCD3-210ENST00000473829 CYR61O00622 381 aa17.77■□□□□ 0.44
PTCD3-210ENST00000473829 PLPP1O14494 284 aa17.77■□□□□ 0.44
PTCD3-210ENST00000473829 PROCP04070 461 aa17.77■□□□□ 0.44
PTCD3-210ENST00000473829 HIST1H1TP22492 207 aaPredicted RBP17.77■□□□□ 0.44
PTCD3-210ENST00000473829 SSR2P43308 183 aa17.77■□□□□ 0.44
PTCD3-210ENST00000473829 OR4D2P58180 307 aa17.77■□□□□ 0.44
PTCD3-210ENST00000473829 BTBD16Q32M84 506 aa17.77■□□□□ 0.44
PTCD3-210ENST00000473829 GGTA1PQ4G0N0 100 aa17.77■□□□□ 0.44
PTCD3-210ENST00000473829 IRAK1BP1Q5VVH5 260 aa17.77■□□□□ 0.44
PTCD3-210ENST00000473829 B3GNTL1Q67FW5 361 aaPredicted RBP17.77■□□□□ 0.44
PTCD3-210ENST00000473829 PLAG1Q6DJT9 500 aa17.77■□□□□ 0.44
PTCD3-210ENST00000473829 LINC00696Q6ZRV3 163 aa17.77■□□□□ 0.44
PTCD3-210ENST00000473829 RIPOR1Q6ZS17 1223 aa17.77■□□□□ 0.44
PTCD3-210ENST00000473829 CHSY3Q70JA7 882 aa17.77■□□□□ 0.44
PTCD3-210ENST00000473829 CNPY4Q8N129 248 aa17.77■□□□□ 0.44
PTCD3-210ENST00000473829 C4orf33Q8N1A6 199 aa17.77■□□□□ 0.44
PTCD3-210ENST00000473829 SRFBP1Q8NEF9 429 aaKnown RBP17.77■□□□□ 0.44
PTCD3-210ENST00000473829 TRPC4APQ8TEL6 797 aa17.77■□□□□ 0.44
PTCD3-210ENST00000473829 REPS1Q96D71 796 aa17.77■□□□□ 0.44
PTCD3-210ENST00000473829 MTFMTQ96DP5 389 aaKnown RBP17.77■□□□□ 0.44
PTCD3-210ENST00000473829 MAPKAP1Q9BPZ7 522 aa17.77■□□□□ 0.44
PTCD3-210ENST00000473829 PTGFRNQ9P2B2 879 aa17.77■□□□□ 0.44
PTCD3-210ENST00000473829 G3V2L1 256 aa17.76■□□□□ 0.43
PTCD3-210ENST00000473829 J3QKU1 62 aa17.76■□□□□ 0.43
PTCD3-210ENST00000473829 KLHL41O60662 606 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms