RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 ARHGEF9O43307 516 aa8.66□□□□□ -1.02
VCL-204ENST00000472585 OR1F1O43749 312 aa8.66□□□□□ -1.02
VCL-204ENST00000472585 ITGA10O75578 1167 aa8.66□□□□□ -1.02
VCL-204ENST00000472585 CELA3AP09093 270 aa8.66□□□□□ -1.02
VCL-204ENST00000472585 TPSB2P20231 275 aa8.66□□□□□ -1.02
VCL-204ENST00000472585 IL10P22301 178 aa8.66□□□□□ -1.02
VCL-204ENST00000472585 SLC1A2P43004 574 aa8.66□□□□□ -1.02
VCL-204ENST00000472585 ZNF75DP51815 510 aa8.66□□□□□ -1.02
VCL-204ENST00000472585 HNRNPFP52597 415 aaKnown RBP8.66□□□□□ -1.02
VCL-204ENST00000472585 RAB8AP61006 207 aa8.66□□□□□ -1.02
VCL-204ENST00000472585 NKX6-1P78426 367 aaPredicted RBP8.66□□□□□ -1.02
VCL-204ENST00000472585 HERC3Q15034 1050 aa8.66□□□□□ -1.02
VCL-204ENST00000472585 TRIP13Q15645 432 aaPredicted RBP8.66□□□□□ -1.02
VCL-204ENST00000472585 TPSAB1Q15661 275 aa8.66□□□□□ -1.02
VCL-204ENST00000472585 ZNF750Q32MQ0 723 aa8.66□□□□□ -1.02
VCL-204ENST00000472585 LINC01559Q495D7 138 aa8.66□□□□□ -1.02
VCL-204ENST00000472585 SHEQ5VZ18 495 aa8.66□□□□□ -1.02
VCL-204ENST00000472585 ZNF470Q6ECI4 717 aa8.66□□□□□ -1.02
VCL-204ENST00000472585 UGT3A1Q6NUS8 523 aa8.66□□□□□ -1.02
VCL-204ENST00000472585 DRICH1Q6PGQ1 229 aaPredicted RBP8.66□□□□□ -1.02
VCL-204ENST00000472585 LCTLQ6UWM7 567 aa8.66□□□□□ -1.02
VCL-204ENST00000472585 QSOX2Q6ZRP7 698 aa8.66□□□□□ -1.02
VCL-204ENST00000472585 C17orf64Q86WR6 236 aa8.66□□□□□ -1.02
VCL-204ENST00000472585 SYCE1Q8N0S2 351 aa8.66□□□□□ -1.02
VCL-204ENST00000472585 TTYH2Q9BSA4 534 aa8.66□□□□□ -1.02
VCL-204ENST00000472585 CNPPD1Q9BV87 410 aa8.66□□□□□ -1.02
VCL-204ENST00000472585 DEFB126Q9BYW3 111 aa8.66□□□□□ -1.02
VCL-204ENST00000472585 ZDHHC11Q9H8X9 412 aa8.66□□□□□ -1.02
VCL-204ENST00000472585 SEMA4BQ9NPR2 832 aaPredicted RBP8.66□□□□□ -1.02
VCL-204ENST00000472585 INTS10Q9NVR2 710 aaKnown RBP8.66□□□□□ -1.02
VCL-204ENST00000472585 TRMT1Q9NXH9 659 aaKnown RBP8.66□□□□□ -1.02
VCL-204ENST00000472585 CRIM1Q9NZV1 1036 aa8.66□□□□□ -1.02
VCL-204ENST00000472585 Q9UFV3 132 aa8.66□□□□□ -1.02
VCL-204ENST00000472585 IKZF3Q9UKT9 509 aa8.66□□□□□ -1.02
VCL-204ENST00000472585 PPIEQ9UNP9 301 aaKnown RBP8.66□□□□□ -1.02
VCL-204ENST00000472585 ARID1AO14497 2285 aa8.65□□□□□ -1.02
VCL-204ENST00000472585 TRBV11-1A0A0K0K1C0 115 aa8.65□□□□□ -1.02
VCL-204ENST00000472585 CTAGE9A4FU28 777 aa8.65□□□□□ -1.02
VCL-204ENST00000472585 FAM166BA8MTA8 275 aa8.65□□□□□ -1.02
VCL-204ENST00000472585 KDM4EB2RXH2 506 aaPredicted RBP8.65□□□□□ -1.02
VCL-204ENST00000472585 CEP104O60308 925 aa8.65□□□□□ -1.02
VCL-204ENST00000472585 GLSO94925 669 aaPredicted RBP8.65□□□□□ -1.02
VCL-204ENST00000472585 OR6B1O95007 311 aa8.65□□□□□ -1.02
VCL-204ENST00000472585 ATE1O95260 518 aa8.65□□□□□ -1.02
VCL-204ENST00000472585 SERPIND1P05546 499 aa8.65□□□□□ -1.02
VCL-204ENST00000472585 ENO3P13929 434 aaPredicted RBP8.65□□□□□ -1.02
VCL-204ENST00000472585 UQCRC1P31930 480 aa8.65□□□□□ -1.02
VCL-204ENST00000472585 HNF4AP41235 474 aa8.65□□□□□ -1.02
VCL-204ENST00000472585 MAGEA6P43360 314 aa8.65□□□□□ -1.02
VCL-204ENST00000472585 SCTRP47872 440 aa8.65□□□□□ -1.02
VCL-204ENST00000472585 PPIAP62937 165 aaKnown RBP8.65□□□□□ -1.02
VCL-204ENST00000472585 PWP1Q13610 501 aa8.65□□□□□ -1.02
VCL-204ENST00000472585 RUNX2Q13950 521 aa8.65□□□□□ -1.02
VCL-204ENST00000472585 DHX34Q14147 1143 aaKnown RBP8.65□□□□□ -1.02
VCL-204ENST00000472585 SLC25A35Q3KQZ1 300 aa8.65□□□□□ -1.02
VCL-204ENST00000472585 TTLL9Q3SXZ7 439 aa8.65□□□□□ -1.02
VCL-204ENST00000472585 FLYWCH1Q4VC44 716 aa8.65□□□□□ -1.02
VCL-204ENST00000472585 PAQR3Q6TCH7 311 aa8.65□□□□□ -1.02
VCL-204ENST00000472585 SEM1Q6ZVN7 128 aa8.65□□□□□ -1.02
VCL-204ENST00000472585 WDR53Q7Z5U6 358 aaPredicted RBP8.65□□□□□ -1.02
VCL-204ENST00000472585 KIAA1328Q86T90 577 aa8.65□□□□□ -1.02
VCL-204ENST00000472585 CYP4Z2PQ8N1L4 340 aa8.65□□□□□ -1.02
VCL-204ENST00000472585 CA13Q8N1Q1 262 aa8.65□□□□□ -1.02
VCL-204ENST00000472585 ZNF321PQ8N8H1 164 aa8.65□□□□□ -1.02
VCL-204ENST00000472585 PSD4Q8NDX1 1056 aa8.65□□□□□ -1.02
VCL-204ENST00000472585 B3GNT7Q8NFL0 401 aa8.65□□□□□ -1.02
VCL-204ENST00000472585 OR2M7Q8NG81 312 aa8.65□□□□□ -1.02
VCL-204ENST00000472585 NT5CQ8TCD5 201 aa8.65□□□□□ -1.02
VCL-204ENST00000472585 SLCO2A1Q92959 643 aa8.65□□□□□ -1.02
VCL-204ENST00000472585 LRRC46Q96FV0 321 aa8.65□□□□□ -1.02
VCL-204ENST00000472585 SNF8Q96H20 258 aa8.65□□□□□ -1.02
VCL-204ENST00000472585 NDNQ99608 321 aa8.65□□□□□ -1.02
VCL-204ENST00000472585 AARSD1Q9BTE6 412 aaKnown RBP8.65□□□□□ -1.02
VCL-204ENST00000472585 PCBD2Q9H0N5 130 aa8.65□□□□□ -1.02
VCL-204ENST00000472585 RHBGQ9H310 441 aa8.65□□□□□ -1.02
VCL-204ENST00000472585 PARVBQ9HBI1 364 aa8.65□□□□□ -1.02
VCL-204ENST00000472585 DMRT3Q9NQL9 472 aa8.65□□□□□ -1.02
VCL-204ENST00000472585 ZANQ9Y493 2812 aa8.65□□□□□ -1.03
VCL-204ENST00000472585 A0A1B0GVC2 190 aa8.64□□□□□ -1.03
VCL-204ENST00000472585 TRBC2A0A5B9 178 aa8.64□□□□□ -1.03
VCL-204ENST00000472585 FIGNL2A6NMB9 653 aa8.64□□□□□ -1.03
VCL-204ENST00000472585 FCHO1O14526 889 aa8.64□□□□□ -1.03
VCL-204ENST00000472585 OR2J2O76002 312 aa8.64□□□□□ -1.03
VCL-204ENST00000472585 MYO1DO94832 1006 aa8.64□□□□□ -1.03
VCL-204ENST00000472585 TBX6O95947 436 aaPredicted RBP8.64□□□□□ -1.03
VCL-204ENST00000472585 F12P00748 615 aaPredicted RBP8.64□□□□□ -1.03
VCL-204ENST00000472585 IGHG3P01860 377 aa8.64□□□□□ -1.03
VCL-204ENST00000472585 SLC35G6P0C7Q6 338 aa8.64□□□□□ -1.03
VCL-204ENST00000472585 ACVR2AP27037 513 aa8.64□□□□□ -1.03
VCL-204ENST00000472585 CCR8P51685 355 aa8.64□□□□□ -1.03
VCL-204ENST00000472585 CDKN2DP55273 166 aa8.64□□□□□ -1.03
VCL-204ENST00000472585 DHX9Q08211 1270 aaKnown RBP8.64□□□□□ -1.03
VCL-204ENST00000472585 FOXO1Q12778 655 aa8.64□□□□□ -1.03
VCL-204ENST00000472585 KIF5AQ12840 1032 aa8.64□□□□□ -1.03
VCL-204ENST00000472585 PCBP2Q15366 365 aaKnown RBP eCLIP8.64□□□□□ -1.03
VCL-204ENST00000472585 RBM20Q5T481 1227 aaKnown RBP8.64□□□□□ -1.03
VCL-204ENST00000472585 SEL1L2Q5TEA6 688 aa8.64□□□□□ -1.03
VCL-204ENST00000472585 ZNF585AQ6P3V2 769 aa8.64□□□□□ -1.03
VCL-204ENST00000472585 IL20RBQ6UXL0 311 aa8.64□□□□□ -1.03
VCL-204ENST00000472585 B3GNT6Q6ZMB0 384 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms