RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 AKR1C4P17516 323 aa12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 PEX2P28328 305 aa12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 LUMP51884 338 aaPredicted RBP12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 DAOAP59103 153 aa12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 PPP2CAP67775 309 aa12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 LAPTM4AQ15012 233 aa12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 ZNF761Q86XN6 746 aaPredicted RBP12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 IRGQQ8WZA9 623 aa12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 NSMAFQ92636 917 aa12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 POP5Q969H6 163 aaKnown RBP12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 HSD17B14Q9BPX1 270 aa12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 DNTTIP1Q9H147 329 aa12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 A0A0U1RQK1 487 aa12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 E7ESA3 106 aa12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 NDUFS1P28331 727 aa12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 SSX2Q16385 188 aa12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 SIRPB2Q5JXA9 342 aa12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 EIF5AL1Q6IS14 154 aaKnown RBP12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 ILDR1Q86SU0 546 aaPredicted RBP12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 LGI4Q8N135 537 aa12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 TCTEX1D2Q8WW35 142 aa12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 HLA-DQB2P05538 268 aa12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 TGM1P22735 817 aa12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 GRPRP30550 384 aa12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 STK11Q15831 433 aa12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 BATFQ16520 125 aa12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 MPP7Q5T2T1 576 aa12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 KANK2Q63ZY3 851 aa12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 SLITRK4Q8IW52 837 aa12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 ZDHHC12Q96GR4 267 aa12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 SLC7A11Q9UPY5 501 aa12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 J3KR12 359 aa12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 KLF8O95600 359 aaPredicted RBP12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 ACVRL1P37023 503 aa12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 CCNHP51946 323 aaPredicted RBP12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 EXOC3L2Q2M3D2 409 aa12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 SH3D19Q5HYK7 790 aa12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 TRIM73Q86UV7 250 aa12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 TOMM5Q8N4H5 51 aa12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 OR9K2Q8NGE7 335 aa12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 CMTM7Q96FZ5 175 aa12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 CENPNQ96H22 339 aaPredicted RBP12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 PAPOLGQ9BWT3 736 aaKnown RBP12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 GPR88Q9GZN0 384 aa12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 TIGARQ9NQ88 270 aa12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 PAK6Q9NQU5 681 aaPredicted RBP12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 SMSP52788 366 aa12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 HABP2Q14520 560 aaPredicted RBP12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 TRMT10BQ6PF06 316 aaKnown RBP12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 THOC6Q86W42 341 aaKnown RBP12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 IRF7Q92985 503 aa12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 FAM163AQ96GL9 167 aaPredicted RBP12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 RBP7Q96R05 134 aa12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 SLC2A4RGQ9NR83 387 aa12.8□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 NUP214P35658 2090 aaPredicted RBP12.79□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 A0A1W2PP55 124 aa12.79□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 A8MVJ9 347 aa12.79□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 EDF1O60869 148 aaKnown RBP12.79□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 GABRA3P34903 492 aa12.79□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 ETV5P41161 510 aa12.79□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 OR1E2P47887 323 aa12.79□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 ZNF648Q5T619 568 aaPredicted RBP12.79□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 WFIKKN2Q8TEU8 576 aa12.79□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 SPRYD4Q8WW59 207 aaPredicted RBP12.79□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 FUZQ9BT04 418 aa12.79□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 ATG5Q9H1Y0 275 aa12.79□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 TMEM100Q9NV29 134 aa12.79□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 H7BY64 318 aa12.79□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 YY2O15391 372 aa12.79□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 GATMP50440 423 aa12.79□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 ERN2Q76MJ5 926 aaKnown RBP12.79□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 PRAP1Q96NZ9 151 aa12.79□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 TAS2R1Q9NYW7 299 aa12.79□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 TLR6Q9Y2C9 796 aa12.79□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 RPL36Q9Y3U8 105 aaKnown RBP12.79□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 ATRNL1Q5VV63 1379 aa12.79□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 CBSLP0DN79 551 aa12.79□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 CBSP35520 551 aa12.79□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 ERI1Q8IV48 349 aaKnown RBP12.79□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 ECHDC3Q96DC8 303 aa12.79□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 TSPAN18Q96SJ8 248 aa12.79□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 GRID2O43424 1007 aa12.79□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 ADAP00813 363 aa12.79□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 ZBTB48P10074 688 aaPredicted RBP12.79□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 CDH1P12830 882 aa12.79□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 RPS3P23396 243 aaKnown RBP eCLIP12.79□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 RPS15P62841 145 aaKnown RBP12.79□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 PMS2P3Q13401 168 aa12.79□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 SLC14A2Q15849 920 aa12.79□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 SLC10A6Q3KNW5 377 aa12.79□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 FRG2Q64ET8 278 aa12.79□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 LRRC55Q6ZSA7 311 aa12.79□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 GALNT15Q8N3T1 639 aa12.79□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 WDSUB1Q8N9V3 476 aa12.79□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 ZNF610Q8N9Z0 462 aa12.79□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 RAB8BQ92930 207 aa12.79□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 FRG2BQ96QU4 278 aa12.79□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 ECI2O75521 394 aa12.79□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 PTF1AQ7RTS3 328 aa12.79□□□□□ -0.36
NPHP3-ACAD11-201ENST00000471702 ARHGAP12Q8IWW6 846 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms