RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 VIMP08670 466 aaKnown RBP12.69□□□□□ -0.38
HMGN1-211ENST00000471260 ZNF888P0CJ79 500 aaPredicted RBP12.69□□□□□ -0.38
HMGN1-211ENST00000471260 CCDC166P0CW27 439 aa12.69□□□□□ -0.38
HMGN1-211ENST00000471260 PHBP35232 272 aa12.69□□□□□ -0.38
HMGN1-211ENST00000471260 SPRP35270 261 aaPredicted RBP12.69□□□□□ -0.38
HMGN1-211ENST00000471260 MAGEA4P43358 317 aa12.69□□□□□ -0.38
HMGN1-211ENST00000471260 HYAL2Q12891 473 aa12.69□□□□□ -0.38
HMGN1-211ENST00000471260 RIPK1Q13546 671 aa12.69□□□□□ -0.38
HMGN1-211ENST00000471260 ZKSCAN8Q15776 578 aaPredicted RBP12.69□□□□□ -0.38
HMGN1-211ENST00000471260 SFT2D3Q587I9 215 aa12.69□□□□□ -0.38
HMGN1-211ENST00000471260 GRTP1Q5TC63 336 aa12.69□□□□□ -0.38
HMGN1-211ENST00000471260 SULT1C3Q6IMI6 304 aa12.69□□□□□ -0.38
HMGN1-211ENST00000471260 PAPD4Q6PIY7 484 aaKnown RBP12.69□□□□□ -0.38
HMGN1-211ENST00000471260 SLCO4C1Q6ZQN7 724 aa12.69□□□□□ -0.38
HMGN1-211ENST00000471260 GPSM1Q86YR5 675 aa12.69□□□□□ -0.38
HMGN1-211ENST00000471260 LGI4Q8N135 537 aa12.69□□□□□ -0.38
HMGN1-211ENST00000471260 KRT78Q8N1N4 520 aa12.69□□□□□ -0.38
HMGN1-211ENST00000471260 SLC5A8Q8N695 610 aa12.69□□□□□ -0.38
HMGN1-211ENST00000471260 OR5T3Q8NGG3 340 aa12.69□□□□□ -0.38
HMGN1-211ENST00000471260 CREB3L4Q8TEY5 395 aa12.69□□□□□ -0.38
HMGN1-211ENST00000471260 UBXN10Q96LJ8 280 aa12.69□□□□□ -0.38
HMGN1-211ENST00000471260 SPNS1Q9H2V7 528 aa12.69□□□□□ -0.38
HMGN1-211ENST00000471260 KCNK13Q9HB14 408 aa12.69□□□□□ -0.38
HMGN1-211ENST00000471260 ARL2BPQ9Y2Y0 163 aa12.69□□□□□ -0.38
HMGN1-211ENST00000471260 CPAMD8Q8IZJ3 1885 aa12.69□□□□□ -0.38
HMGN1-211ENST00000471260 PRRC2CQ9Y520 2896 aaKnown RBP12.69□□□□□ -0.38
HMGN1-211ENST00000471260 A0A088AWK7 358 aa12.68□□□□□ -0.38
HMGN1-211ENST00000471260 SYNDIG1LA6NDD5 238 aa12.68□□□□□ -0.38
HMGN1-211ENST00000471260 OR2W5A6NFC9 320 aa12.68□□□□□ -0.38
HMGN1-211ENST00000471260 ZNF860A6NHJ4 632 aa12.68□□□□□ -0.38
HMGN1-211ENST00000471260 A8MUI8 341 aa12.68□□□□□ -0.38
HMGN1-211ENST00000471260 CXorf49A8MYA2 514 aaPredicted RBP12.68□□□□□ -0.38
HMGN1-211ENST00000471260 PSMD12O00232 456 aaPredicted RBP12.68□□□□□ -0.38
HMGN1-211ENST00000471260 PRMT3O60678 531 aa12.68□□□□□ -0.38
HMGN1-211ENST00000471260 CDC123O75794 336 aaPredicted RBP12.68□□□□□ -0.38
HMGN1-211ENST00000471260 RASAL1O95294 804 aa12.68□□□□□ -0.38
HMGN1-211ENST00000471260 RNH1P13489 461 aaKnown RBP12.68□□□□□ -0.38
HMGN1-211ENST00000471260 CD1DP15813 335 aa12.68□□□□□ -0.38
HMGN1-211ENST00000471260 ZNF10P21506 573 aaPredicted RBP12.68□□□□□ -0.38
HMGN1-211ENST00000471260 STX2P32856 288 aa12.68□□□□□ -0.38
HMGN1-211ENST00000471260 SLCO1A2P46721 670 aa12.68□□□□□ -0.38
HMGN1-211ENST00000471260 PER3P56645 1201 aa12.68□□□□□ -0.38
HMGN1-211ENST00000471260 OR4D2P58180 307 aa12.68□□□□□ -0.38
HMGN1-211ENST00000471260 TAS2R50P59544 299 aa12.68□□□□□ -0.38
HMGN1-211ENST00000471260 NAB1Q13506 487 aa12.68□□□□□ -0.38
HMGN1-211ENST00000471260 C4orf17Q53FE4 359 aa12.68□□□□□ -0.38
HMGN1-211ENST00000471260 ACER2Q5QJU3 275 aa12.68□□□□□ -0.38
HMGN1-211ENST00000471260 FBXW10Q5XX13 1052 aa12.68□□□□□ -0.38
HMGN1-211ENST00000471260 TMIGD1Q6UXZ0 262 aa12.68□□□□□ -0.38
HMGN1-211ENST00000471260 ARMC2Q8NEN0 867 aa12.68□□□□□ -0.38
HMGN1-211ENST00000471260 NR4A3Q92570 626 aa12.68□□□□□ -0.38
HMGN1-211ENST00000471260 KIAA1191Q96A73 305 aa12.68□□□□□ -0.38
HMGN1-211ENST00000471260 MAGEB10Q96LZ2 347 aaPredicted RBP12.68□□□□□ -0.38
HMGN1-211ENST00000471260 NPLQ9BXD5 320 aaPredicted RBP12.68□□□□□ -0.38
HMGN1-211ENST00000471260 WWOXQ9NZC7 414 aa12.68□□□□□ -0.38
HMGN1-211ENST00000471260 NAV2Q8IVL1 2488 aa12.68□□□□□ -0.38
HMGN1-211ENST00000471260 ZGRF1Q86YA3 2104 aa12.67□□□□□ -0.38
HMGN1-211ENST00000471260 A0A1B0GUH1 482 aa12.67□□□□□ -0.38
HMGN1-211ENST00000471260 EXOC1LA0A1B0GW35 172 aa12.67□□□□□ -0.38
HMGN1-211ENST00000471260 CLGNO14967 610 aa12.67□□□□□ -0.38
HMGN1-211ENST00000471260 CLEC3AO75596 197 aa12.67□□□□□ -0.38
HMGN1-211ENST00000471260 STK16O75716 305 aa12.67□□□□□ -0.38
HMGN1-211ENST00000471260 PIAS1O75925 651 aa12.67□□□□□ -0.38
HMGN1-211ENST00000471260 C1QAP02745 245 aa12.67□□□□□ -0.38
HMGN1-211ENST00000471260 STSP08842 583 aa12.67□□□□□ -0.38
HMGN1-211ENST00000471260 GDF5P43026 501 aa12.67□□□□□ -0.38
HMGN1-211ENST00000471260 GPX6P59796 221 aa12.67□□□□□ -0.38
HMGN1-211ENST00000471260 RAB10P61026 200 aa12.67□□□□□ -0.38
HMGN1-211ENST00000471260 SNCBQ16143 134 aa12.67□□□□□ -0.38
HMGN1-211ENST00000471260 MAMDC2Q7Z304 686 aaPredicted RBP12.67□□□□□ -0.38
HMGN1-211ENST00000471260 SPATA21Q7Z572 469 aa12.67□□□□□ -0.38
HMGN1-211ENST00000471260 CCDC91Q7Z6B0 441 aa12.67□□□□□ -0.38
HMGN1-211ENST00000471260 TRABD2AQ86V40 505 aa12.67□□□□□ -0.38
HMGN1-211ENST00000471260 CTAGE3PQ8IX95 158 aa12.67□□□□□ -0.38
HMGN1-211ENST00000471260 SHISA5Q8N114 240 aa12.67□□□□□ -0.38
HMGN1-211ENST00000471260 HORMAD2Q8N7B1 307 aa12.67□□□□□ -0.38
HMGN1-211ENST00000471260 PDPRQ8NCN5 879 aa12.67□□□□□ -0.38
HMGN1-211ENST00000471260 STAG3L4Q8TBR4 150 aa12.67□□□□□ -0.38
HMGN1-211ENST00000471260 ELP5Q8TE02 316 aa12.67□□□□□ -0.38
HMGN1-211ENST00000471260 ADAMTS18Q8TE60 1221 aa12.67□□□□□ -0.38
HMGN1-211ENST00000471260 TSLPQ969D9 159 aa12.67□□□□□ -0.38
HMGN1-211ENST00000471260 GAL3ST3Q96A11 431 aa12.67□□□□□ -0.38
HMGN1-211ENST00000471260 FAR2Q96K12 515 aa12.67□□□□□ -0.38
HMGN1-211ENST00000471260 PTCHD1Q96NR3 888 aa12.67□□□□□ -0.38
HMGN1-211ENST00000471260 TAAR6Q96RI8 345 aa12.67□□□□□ -0.38
HMGN1-211ENST00000471260 RBCK1Q9BYM8 510 aa12.67□□□□□ -0.38
HMGN1-211ENST00000471260 KLHL31Q9H511 634 aa12.67□□□□□ -0.38
HMGN1-211ENST00000471260 CAB39LQ9H9S4 337 aa12.67□□□□□ -0.38
HMGN1-211ENST00000471260 PRDM9Q9NQV7 894 aa12.67□□□□□ -0.38
HMGN1-211ENST00000471260 DNAJC11Q9NVH1 559 aa12.67□□□□□ -0.38
HMGN1-211ENST00000471260 PSMC3IPQ9P2W1 217 aaPredicted RBP12.67□□□□□ -0.38
HMGN1-211ENST00000471260 PTBP2Q9UKA9 531 aaKnown RBP12.67□□□□□ -0.38
HMGN1-211ENST00000471260 MMACHCQ9Y4U1 282 aa12.67□□□□□ -0.38
HMGN1-211ENST00000471260 SVILO95425 2214 aa12.67□□□□□ -0.38
HMGN1-211ENST00000471260 IGKV3D-11A0A0A0MRZ8 115 aa12.66□□□□□ -0.38
HMGN1-211ENST00000471260 TCRBV16S1A1N1A0A5B0 115 aa12.66□□□□□ -0.38
HMGN1-211ENST00000471260 CCDC189A1A4V9 331 aa12.66□□□□□ -0.38
HMGN1-211ENST00000471260 LRIT2A6NDA9 550 aa12.66□□□□□ -0.38
HMGN1-211ENST00000471260 ANKDD1BA6NHY2 528 aa12.66□□□□□ -0.38
HMGN1-211ENST00000471260 NCF1BA6NI72 391 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms