RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 NT5DC2Q9H857 520 aa12.39□□□□□ -0.43
CPSF4-210ENST00000469897 POPDC3Q9HBV1 291 aa12.39□□□□□ -0.43
CPSF4-210ENST00000469897 NSMCE4AQ9NXX6 385 aa12.39□□□□□ -0.43
CPSF4-210ENST00000469897 ZNF223Q9UK11 482 aaPredicted RBP12.39□□□□□ -0.43
CPSF4-210ENST00000469897 MMACHCQ9Y4U1 282 aa12.39□□□□□ -0.43
CPSF4-210ENST00000469897 CLDN16Q9Y5I7 305 aa12.39□□□□□ -0.43
CPSF4-210ENST00000469897 A0A1B0GTH9 108 aa12.38□□□□□ -0.43
CPSF4-210ENST00000469897 KLRC4-KLRK1H3BQV0 150 aa12.38□□□□□ -0.43
CPSF4-210ENST00000469897 CCDC188H7C350 402 aa12.38□□□□□ -0.43
CPSF4-210ENST00000469897 PRRG2O14669 202 aa12.38□□□□□ -0.43
CPSF4-210ENST00000469897 ADAM10O14672 748 aa12.38□□□□□ -0.43
CPSF4-210ENST00000469897 CLGNO14967 610 aa12.38□□□□□ -0.43
CPSF4-210ENST00000469897 PHGDHO43175 533 aaKnown RBP12.38□□□□□ -0.43
CPSF4-210ENST00000469897 B3GALT2O43825 422 aa12.38□□□□□ -0.43
CPSF4-210ENST00000469897 HS6ST1O60243 411 aa12.38□□□□□ -0.43
CPSF4-210ENST00000469897 PRKNO60260 465 aaPredicted RBP12.38□□□□□ -0.43
CPSF4-210ENST00000469897 CLEC3AO75596 197 aa12.38□□□□□ -0.43
CPSF4-210ENST00000469897 PDE9AO76083 593 aa12.38□□□□□ -0.43
CPSF4-210ENST00000469897 ELAVL4P26378 380 aaKnown RBP12.38□□□□□ -0.43
CPSF4-210ENST00000469897 PTGER4P35408 488 aa12.38□□□□□ -0.43
CPSF4-210ENST00000469897 GGT5P36269 586 aa12.38□□□□□ -0.43
CPSF4-210ENST00000469897 HSPA7P48741 367 aa12.38□□□□□ -0.43
CPSF4-210ENST00000469897 GPR143P51810 404 aa12.38□□□□□ -0.43
CPSF4-210ENST00000469897 HSD17B7P56937 341 aa12.38□□□□□ -0.43
CPSF4-210ENST00000469897 RAB38P57729 211 aa12.38□□□□□ -0.43
CPSF4-210ENST00000469897 GPR85P60893 370 aa12.38□□□□□ -0.43
CPSF4-210ENST00000469897 POU4F1Q01851 419 aa12.38□□□□□ -0.43
CPSF4-210ENST00000469897 CBLBQ13191 982 aa12.38□□□□□ -0.43
CPSF4-210ENST00000469897 BMPR2Q13873 1038 aa12.38□□□□□ -0.43
CPSF4-210ENST00000469897 DOC2AQ14183 400 aa12.38□□□□□ -0.43
CPSF4-210ENST00000469897 XKR6Q5GH73 641 aa12.38□□□□□ -0.43
CPSF4-210ENST00000469897 CLNKQ7Z7G1 428 aa12.38□□□□□ -0.43
CPSF4-210ENST00000469897 SCUBE1Q8IWY4 988 aa12.38□□□□□ -0.43
CPSF4-210ENST00000469897 ZNF295-AS1Q8N0V1 137 aa12.38□□□□□ -0.43
CPSF4-210ENST00000469897 SNX31Q8N9S9 440 aa12.38□□□□□ -0.43
CPSF4-210ENST00000469897 TTLQ8NG68 377 aa12.38□□□□□ -0.43
CPSF4-210ENST00000469897 NCLNQ969V3 563 aa12.38□□□□□ -0.43
CPSF4-210ENST00000469897 F2RL3Q96RI0 385 aa12.38□□□□□ -0.43
CPSF4-210ENST00000469897 TMEM79Q9BSE2 394 aa12.38□□□□□ -0.43
CPSF4-210ENST00000469897 DERL2Q9GZP9 239 aa12.38□□□□□ -0.43
CPSF4-210ENST00000469897 REXO4Q9GZR2 422 aaKnown RBP12.38□□□□□ -0.43
CPSF4-210ENST00000469897 DPH5Q9H2P9 285 aa12.38□□□□□ -0.43
CPSF4-210ENST00000469897 DNAJC11Q9NVH1 559 aa12.38□□□□□ -0.43
CPSF4-210ENST00000469897 WWOXQ9NZC7 414 aa12.38□□□□□ -0.43
CPSF4-210ENST00000469897 GPRC5BQ9NZH0 403 aa12.38□□□□□ -0.43
CPSF4-210ENST00000469897 KLF13Q9Y2Y9 288 aaPredicted RBP12.38□□□□□ -0.43
CPSF4-210ENST00000469897 HRH3Q9Y5N1 445 aa12.38□□□□□ -0.43
CPSF4-210ENST00000469897 MYO9AB2RTY4 2548 aa12.38□□□□□ -0.43
CPSF4-210ENST00000469897 CRYBG3Q68DQ2 2970 aa12.37□□□□□ -0.43
CPSF4-210ENST00000469897 E9PLN8 166 aa12.37□□□□□ -0.43
CPSF4-210ENST00000469897 CYR61O00622 381 aa12.37□□□□□ -0.43
CPSF4-210ENST00000469897 CDC40O60508 579 aaKnown RBP eCLIP12.37□□□□□ -0.43
CPSF4-210ENST00000469897 CTNSO60931 367 aa12.37□□□□□ -0.43
CPSF4-210ENST00000469897 STK16O75716 305 aa12.37□□□□□ -0.43
CPSF4-210ENST00000469897 ZFAND5O76080 213 aa12.37□□□□□ -0.43
CPSF4-210ENST00000469897 WISP3O95389 354 aaPredicted RBP12.37□□□□□ -0.43
CPSF4-210ENST00000469897 IFNA16P05015 189 aa12.37□□□□□ -0.43
CPSF4-210ENST00000469897 CD1DP15813 335 aa12.37□□□□□ -0.43
CPSF4-210ENST00000469897 POU3F2P20265 443 aaPredicted RBP12.37□□□□□ -0.43
CPSF4-210ENST00000469897 PTGS2P35354 604 aa12.37□□□□□ -0.43
CPSF4-210ENST00000469897 KCNC1P48547 511 aa12.37□□□□□ -0.43
CPSF4-210ENST00000469897 NR0B1P51843 470 aaKnown RBP12.37□□□□□ -0.43
CPSF4-210ENST00000469897 LIM2P55344 173 aa12.37□□□□□ -0.43
CPSF4-210ENST00000469897 OR4D1Q15615 310 aa12.37□□□□□ -0.43
CPSF4-210ENST00000469897 ABHD17CQ6PCB6 329 aa12.37□□□□□ -0.43
CPSF4-210ENST00000469897 C3orf62Q6ZUJ4 267 aa12.37□□□□□ -0.43
CPSF4-210ENST00000469897 GDF7Q7Z4P5 450 aa12.37□□□□□ -0.43
CPSF4-210ENST00000469897 ZNF595Q8IYB9 648 aa12.37□□□□□ -0.43
CPSF4-210ENST00000469897 CYP4Z2PQ8N1L4 340 aa12.37□□□□□ -0.43
CPSF4-210ENST00000469897 POGLUT1Q8NBL1 392 aa12.37□□□□□ -0.43
CPSF4-210ENST00000469897 OR2L5Q8NG80 312 aa12.37□□□□□ -0.43
CPSF4-210ENST00000469897 C16orf52Q8NHV5 167 aa12.37□□□□□ -0.43
CPSF4-210ENST00000469897 VMP1Q96GC9 406 aa12.37□□□□□ -0.43
CPSF4-210ENST00000469897 VKORC1Q9BQB6 163 aa12.37□□□□□ -0.43
CPSF4-210ENST00000469897 CCDC77Q9BR77 488 aa12.37□□□□□ -0.43
CPSF4-210ENST00000469897 ALOXE3Q9BYJ1 711 aa12.37□□□□□ -0.43
CPSF4-210ENST00000469897 CNOT10Q9H9A5 744 aaKnown RBP12.37□□□□□ -0.43
CPSF4-210ENST00000469897 SAYSD1Q9NPB0 183 aa12.37□□□□□ -0.43
CPSF4-210ENST00000469897 PRDM7Q9NQW5 492 aa12.37□□□□□ -0.43
CPSF4-210ENST00000469897 CD274Q9NZQ7 290 aa12.37□□□□□ -0.43
CPSF4-210ENST00000469897 KCMF1Q9P0J7 381 aa12.37□□□□□ -0.43
CPSF4-210ENST00000469897 TXNDC16Q9P2K2 825 aa12.37□□□□□ -0.43
CPSF4-210ENST00000469897 PPT2Q9UMR5 302 aa12.37□□□□□ -0.43
CPSF4-210ENST00000469897 PPIEQ9UNP9 301 aaKnown RBP12.37□□□□□ -0.43
CPSF4-210ENST00000469897 YARS2Q9Y2Z4 477 aaKnown RBP12.37□□□□□ -0.43
CPSF4-210ENST00000469897 CSMD1Q96PZ7 3565 aa12.36□□□□□ -0.43
CPSF4-210ENST00000469897 A0A088AWK7 358 aa12.36□□□□□ -0.43
CPSF4-210ENST00000469897 TMEM200CA6NKL6 621 aa12.36□□□□□ -0.43
CPSF4-210ENST00000469897 TFECO14948 347 aaPredicted RBP12.36□□□□□ -0.43
CPSF4-210ENST00000469897 CCNT2O60583 730 aaKnown RBP12.36□□□□□ -0.43
CPSF4-210ENST00000469897 SH3BGRLO75368 114 aa12.36□□□□□ -0.43
CPSF4-210ENST00000469897 OR2J2O76002 312 aa12.36□□□□□ -0.43
CPSF4-210ENST00000469897 TPOP07202 933 aa12.36□□□□□ -0.43
CPSF4-210ENST00000469897 STMN1P16949 149 aa12.36□□□□□ -0.43
CPSF4-210ENST00000469897 TNNI3P19429 210 aa12.36□□□□□ -0.43
CPSF4-210ENST00000469897 TFEBP19484 476 aa12.36□□□□□ -0.43
CPSF4-210ENST00000469897 CD22P20273 847 aa12.36□□□□□ -0.43
CPSF4-210ENST00000469897 ZNF10P21506 573 aaPredicted RBP12.36□□□□□ -0.43
CPSF4-210ENST00000469897 CERS1P27544 350 aa12.36□□□□□ -0.43
CPSF4-210ENST00000469897 GSTM2P28161 218 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms