RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 PDZK1P1A8MUH7 402 aa9.02□□□□□ -0.96
TOP3A-203ENST00000469739 M0QX08 132 aa9.02□□□□□ -0.96
TOP3A-203ENST00000469739 BCKDKO14874 412 aa9.02□□□□□ -0.96
TOP3A-203ENST00000469739 TPST2O60704 377 aa9.02□□□□□ -0.96
TOP3A-203ENST00000469739 DDX6P26196 483 aaKnown RBP eCLIP9.02□□□□□ -0.96
TOP3A-203ENST00000469739 HPCAL1P37235 193 aa9.02□□□□□ -0.96
TOP3A-203ENST00000469739 DAPP51397 102 aa9.02□□□□□ -0.96
TOP3A-203ENST00000469739 NUDT6P53370 316 aa9.02□□□□□ -0.96
TOP3A-203ENST00000469739 PRKAG1P54619 331 aa9.02□□□□□ -0.96
TOP3A-203ENST00000469739 PPP2R2BQ00005 443 aa9.02□□□□□ -0.96
TOP3A-203ENST00000469739 RPS26P11Q5JNZ5 115 aaPredicted RBP9.02□□□□□ -0.96
TOP3A-203ENST00000469739 LRIF1Q5T3J3 769 aa9.02□□□□□ -0.96
TOP3A-203ENST00000469739 CPZQ66K79 652 aa9.02□□□□□ -0.96
TOP3A-203ENST00000469739 OR2T5Q6IEZ7 315 aa9.02□□□□□ -0.96
TOP3A-203ENST00000469739 GRHL2Q6ISB3 625 aa9.02□□□□□ -0.96
TOP3A-203ENST00000469739 BTLAQ7Z6A9 289 aa9.02□□□□□ -0.96
TOP3A-203ENST00000469739 AMZ2Q86W34 360 aa9.02□□□□□ -0.96
TOP3A-203ENST00000469739 HDDC3Q8N4P3 179 aa9.02□□□□□ -0.96
TOP3A-203ENST00000469739 AMER3Q8N944 861 aa9.02□□□□□ -0.96
TOP3A-203ENST00000469739 Q8N9G6 341 aaPredicted RBP9.02□□□□□ -0.96
TOP3A-203ENST00000469739 MINDY2Q8NBR6 621 aa9.02□□□□□ -0.96
TOP3A-203ENST00000469739 OR2T29Q8NH02 315 aa9.02□□□□□ -0.96
TOP3A-203ENST00000469739 SLC5A11Q8WWX8 675 aa9.02□□□□□ -0.96
TOP3A-203ENST00000469739 SMARCD2Q92925 531 aa9.02□□□□□ -0.96
TOP3A-203ENST00000469739 COQ10AQ96MF6 247 aa9.02□□□□□ -0.96
TOP3A-203ENST00000469739 ZNF347Q96SE7 839 aa9.02□□□□□ -0.96
TOP3A-203ENST00000469739 SLC35A5Q9BS91 424 aa9.02□□□□□ -0.96
TOP3A-203ENST00000469739 YIPF4Q9BSR8 244 aa9.02□□□□□ -0.96
TOP3A-203ENST00000469739 PBX4Q9BYU1 374 aa9.02□□□□□ -0.96
TOP3A-203ENST00000469739 PRSS16Q9NQE7 514 aa9.02□□□□□ -0.96
TOP3A-203ENST00000469739 SPATA6Q9NWH7 488 aaPredicted RBP9.02□□□□□ -0.96
TOP3A-203ENST00000469739 N6AMT1Q9Y5N5 214 aa9.02□□□□□ -0.96
TOP3A-203ENST00000469739 FAM220BPB1ANY3 271 aa9.02□□□□□ -0.97
TOP3A-203ENST00000469739 AP2A2O94973 939 aa9.02□□□□□ -0.97
TOP3A-203ENST00000469739 FABP3P05413 133 aa9.02□□□□□ -0.97
TOP3A-203ENST00000469739 POU1F1P28069 291 aa9.02□□□□□ -0.97
TOP3A-203ENST00000469739 GDI1P31150 447 aa9.02□□□□□ -0.97
TOP3A-203ENST00000469739 RRM2P31350 389 aa9.02□□□□□ -0.97
TOP3A-203ENST00000469739 TIA1P31483 386 aaKnown RBP eCLIP9.02□□□□□ -0.97
TOP3A-203ENST00000469739 GJA4P35212 333 aa9.02□□□□□ -0.97
TOP3A-203ENST00000469739 IDUAP35475 653 aa9.02□□□□□ -0.97
TOP3A-203ENST00000469739 IDH2P48735 452 aaKnown RBP9.02□□□□□ -0.97
TOP3A-203ENST00000469739 SRSF11Q05519 484 aaKnown RBP9.02□□□□□ -0.97
TOP3A-203ENST00000469739 KRT33BQ14525 404 aa9.02□□□□□ -0.97
TOP3A-203ENST00000469739 SLC5A12Q1EHB4 618 aa9.02□□□□□ -0.97
TOP3A-203ENST00000469739 WSCD2Q2TBF2 565 aa9.02□□□□□ -0.97
TOP3A-203ENST00000469739 GGTA1PQ4G0N0 100 aa9.02□□□□□ -0.97
TOP3A-203ENST00000469739 TTC23LQ6PF05 361 aa9.02□□□□□ -0.97
TOP3A-203ENST00000469739 BPHLQ86WA6 291 aaPredicted RBP9.02□□□□□ -0.97
TOP3A-203ENST00000469739 ETFBKMTQ8IXQ9 262 aa9.02□□□□□ -0.97
TOP3A-203ENST00000469739 ZCCHC7Q8N3Z6 543 aaKnown RBP9.02□□□□□ -0.97
TOP3A-203ENST00000469739 CHDHQ8NE62 594 aaPredicted RBP9.02□□□□□ -0.97
TOP3A-203ENST00000469739 TESCQ96BS2 214 aa9.02□□□□□ -0.97
TOP3A-203ENST00000469739 PPCDCQ96CD2 204 aa9.02□□□□□ -0.97
TOP3A-203ENST00000469739 ZDHHC5Q9C0B5 715 aa9.02□□□□□ -0.97
TOP3A-203ENST00000469739 ANKRA2Q9H9E1 313 aa9.02□□□□□ -0.97
TOP3A-203ENST00000469739 CD93Q9NPY3 652 aa9.02□□□□□ -0.97
TOP3A-203ENST00000469739 RLIMQ9NVW2 624 aa9.02□□□□□ -0.97
TOP3A-203ENST00000469739 PAK1IP1Q9NWT1 392 aaPredicted RBP9.02□□□□□ -0.97
TOP3A-203ENST00000469739 TMEFF2Q9UIK5 374 aaPredicted RBP9.02□□□□□ -0.97
TOP3A-203ENST00000469739 HCN2Q9UL51 889 aa9.02□□□□□ -0.97
TOP3A-203ENST00000469739 COL6A3P12111 3177 aa9.02□□□□□ -0.97
TOP3A-203ENST00000469739 ANKDD1BA6NHY2 528 aa9.02□□□□□ -0.97
TOP3A-203ENST00000469739 CLDN25C9JDP6 229 aa9.02□□□□□ -0.97
TOP3A-203ENST00000469739 KAT7O95251 611 aa9.02□□□□□ -0.97
TOP3A-203ENST00000469739 NFATC1O95644 943 aa9.02□□□□□ -0.97
TOP3A-203ENST00000469739 C1GALT1C1LP0DN25 315 aa9.02□□□□□ -0.97
TOP3A-203ENST00000469739 PTNP21246 168 aa9.02□□□□□ -0.97
TOP3A-203ENST00000469739 TGFBR1P36897 503 aa9.02□□□□□ -0.97
TOP3A-203ENST00000469739 MRPL19P49406 292 aaKnown RBP9.02□□□□□ -0.97
TOP3A-203ENST00000469739 CRYBA2P53672 197 aa9.02□□□□□ -0.97
TOP3A-203ENST00000469739 PNLIPRP1P54315 467 aa9.02□□□□□ -0.97
TOP3A-203ENST00000469739 MLLT10P55197 1068 aa9.02□□□□□ -0.97
TOP3A-203ENST00000469739 CDH12P55289 794 aa9.02□□□□□ -0.97
TOP3A-203ENST00000469739 MPEG1Q2M385 716 aa9.02□□□□□ -0.97
TOP3A-203ENST00000469739 GAB4Q2WGN9 574 aa9.02□□□□□ -0.97
TOP3A-203ENST00000469739 PRAMEF14Q5SWL7 426 aa9.02□□□□□ -0.97
TOP3A-203ENST00000469739 C6orf141Q5SZD1 244 aa9.02□□□□□ -0.97
TOP3A-203ENST00000469739 PRAMEF13Q5VWM6 474 aa9.02□□□□□ -0.97
TOP3A-203ENST00000469739 LAIR1Q6GTX8 287 aa9.02□□□□□ -0.97
TOP3A-203ENST00000469739 KLHL17Q6TDP4 642 aa9.02□□□□□ -0.97
TOP3A-203ENST00000469739 TMIGD1Q6UXZ0 262 aa9.02□□□□□ -0.97
TOP3A-203ENST00000469739 PIWIL3Q7Z3Z3 882 aaKnown RBP9.02□□□□□ -0.97
TOP3A-203ENST00000469739 CALHM3Q86XJ0 350 aa9.02□□□□□ -0.97
TOP3A-203ENST00000469739 YAF2Q8IY57 180 aa9.02□□□□□ -0.97
TOP3A-203ENST00000469739 OR56A3Q8NH54 315 aa9.02□□□□□ -0.97
TOP3A-203ENST00000469739 OR14C36Q8NHC7 312 aa9.02□□□□□ -0.97
TOP3A-203ENST00000469739 CCDC115Q96NT0 180 aa9.02□□□□□ -0.97
TOP3A-203ENST00000469739 FERD3LQ96RJ6 166 aa9.02□□□□□ -0.97
TOP3A-203ENST00000469739 RBM4BQ9BQ04 359 aaKnown RBP9.02□□□□□ -0.97
TOP3A-203ENST00000469739 RBM4Q9BWF3 364 aaKnown RBP9.02□□□□□ -0.97
TOP3A-203ENST00000469739 ASPSCR1Q9BZE9 553 aa9.02□□□□□ -0.97
TOP3A-203ENST00000469739 CD320Q9NPF0 282 aa9.02□□□□□ -0.97
TOP3A-203ENST00000469739 GPATCH2Q9NW75 528 aa9.02□□□□□ -0.97
TOP3A-203ENST00000469739 THUMPD1Q9NXG2 353 aaKnown RBP9.02□□□□□ -0.97
TOP3A-203ENST00000469739 ERVK-18Q9QC07 812 aa9.02□□□□□ -0.97
TOP3A-203ENST00000469739 PCDHB11Q9Y5F2 797 aa9.02□□□□□ -0.97
TOP3A-203ENST00000469739 EDDM13A0A1B0GTR0 161 aa9.01□□□□□ -0.97
TOP3A-203ENST00000469739 KMOO15229 486 aa9.01□□□□□ -0.97
TOP3A-203ENST00000469739 SLC16A5O15375 505 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms