RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 OLA1Q9NTK5 396 aaKnown RBP9.57□□□□□ -0.88
NUP50-214ENST00000469163 BABAM2Q9NXR7 383 aa9.57□□□□□ -0.88
NUP50-214ENST00000469163 CACNA2D2Q9NY47 1150 aa9.57□□□□□ -0.88
NUP50-214ENST00000469163 EIF2B4Q9UI10 523 aaKnown RBP9.57□□□□□ -0.88
NUP50-214ENST00000469163 MED16Q9Y2X0 877 aa9.57□□□□□ -0.88
NUP50-214ENST00000469163 CELSR3Q9NYQ7 3312 aa9.57□□□□□ -0.88
NUP50-214ENST00000469163 PQLC2LA1A4F0 135 aa9.57□□□□□ -0.88
NUP50-214ENST00000469163 IQCF5A8MTL0 148 aa9.57□□□□□ -0.88
NUP50-214ENST00000469163 ZNF197O14709 1029 aa9.57□□□□□ -0.88
NUP50-214ENST00000469163 INSIG1O15503 277 aa9.57□□□□□ -0.88
NUP50-214ENST00000469163 SIGLEC6O43699 453 aa9.57□□□□□ -0.88
NUP50-214ENST00000469163 FZD6O60353 706 aa9.57□□□□□ -0.88
NUP50-214ENST00000469163 WDR47O94967 919 aa9.57□□□□□ -0.88
NUP50-214ENST00000469163 VNN2O95498 520 aa9.57□□□□□ -0.88
NUP50-214ENST00000469163 ARSAP15289 507 aa9.57□□□□□ -0.88
NUP50-214ENST00000469163 SPCS3P61009 180 aa9.57□□□□□ -0.88
NUP50-214ENST00000469163 ZXDBP98169 803 aa9.57□□□□□ -0.88
NUP50-214ENST00000469163 ANGPT1Q15389 498 aa9.57□□□□□ -0.88
NUP50-214ENST00000469163 PTCHD3Q3KNS1 767 aa9.57□□□□□ -0.88
NUP50-214ENST00000469163 PSTKQ8IV42 348 aaKnown RBP9.57□□□□□ -0.88
NUP50-214ENST00000469163 TCTE3Q8IZS6 198 aa9.57□□□□□ -0.88
NUP50-214ENST00000469163 C8orf59Q8N0T1 100 aaPredicted RBP9.57□□□□□ -0.88
NUP50-214ENST00000469163 ZFP82Q8N141 532 aa9.57□□□□□ -0.88
NUP50-214ENST00000469163 C2orf73Q8N5S3 287 aaPredicted RBP9.57□□□□□ -0.88
NUP50-214ENST00000469163 TBL1YQ9BQ87 522 aa9.57□□□□□ -0.88
NUP50-214ENST00000469163 TMEM175Q9BSA9 504 aa9.57□□□□□ -0.88
NUP50-214ENST00000469163 PTDSS2Q9BVG9 487 aa9.57□□□□□ -0.88
NUP50-214ENST00000469163 HECAQ9UBI9 543 aaPredicted RBP9.57□□□□□ -0.88
NUP50-214ENST00000469163 RAPGEFL1Q9UHV5 662 aa9.57□□□□□ -0.88
NUP50-214ENST00000469163 LAMA1P25391 3075 aa9.57□□□□□ -0.88
NUP50-214ENST00000469163 AHCTF1Q8WYP5 2266 aa9.57□□□□□ -0.88
NUP50-214ENST00000469163 SLC22A23A1A5C7 686 aa9.57□□□□□ -0.88
NUP50-214ENST00000469163 RFPL3O75679 317 aa9.57□□□□□ -0.88
NUP50-214ENST00000469163 TIE1P35590 1138 aa9.57□□□□□ -0.88
NUP50-214ENST00000469163 PSMD4P55036 377 aaKnown RBP9.57□□□□□ -0.88
NUP50-214ENST00000469163 MAB21L1Q13394 359 aa9.57□□□□□ -0.88
NUP50-214ENST00000469163 IL18R1Q13478 541 aa9.57□□□□□ -0.88
NUP50-214ENST00000469163 EXOSC2Q13868 293 aaKnown RBP9.57□□□□□ -0.88
NUP50-214ENST00000469163 TCTE1Q5JU00 501 aa9.57□□□□□ -0.88
NUP50-214ENST00000469163 GLYATQ6IB77 296 aa9.57□□□□□ -0.88
NUP50-214ENST00000469163 NAPEPLDQ6IQ20 393 aa9.57□□□□□ -0.88
NUP50-214ENST00000469163 SLC8B1Q6J4K2 584 aa9.57□□□□□ -0.88
NUP50-214ENST00000469163 ANKRD54Q6NXT1 300 aa9.57□□□□□ -0.88
NUP50-214ENST00000469163 DRICH1Q6PGQ1 229 aaPredicted RBP9.57□□□□□ -0.88
NUP50-214ENST00000469163 THAP5Q7Z6K1 395 aa9.57□□□□□ -0.88
NUP50-214ENST00000469163 KCNMB4Q86W47 210 aa9.57□□□□□ -0.88
NUP50-214ENST00000469163 SFTPA1Q8IWL2 248 aa9.57□□□□□ -0.88
NUP50-214ENST00000469163 CLDN19Q8N6F1 224 aa9.57□□□□□ -0.88
NUP50-214ENST00000469163 KDF1Q8NAX2 398 aaPredicted RBP9.57□□□□□ -0.88
NUP50-214ENST00000469163 OR4K2Q8NGD2 314 aa9.57□□□□□ -0.88
NUP50-214ENST00000469163 SLC13A3Q8WWT9 602 aa9.57□□□□□ -0.88
NUP50-214ENST00000469163 EDARADDQ8WWZ3 215 aa9.57□□□□□ -0.88
NUP50-214ENST00000469163 TIFAQ96CG3 184 aa9.57□□□□□ -0.88
NUP50-214ENST00000469163 RPP25Q9BUL9 199 aaKnown RBP9.57□□□□□ -0.88
NUP50-214ENST00000469163 SDHAF2Q9NX18 166 aa9.57□□□□□ -0.88
NUP50-214ENST00000469163 SPHK1Q9NYA1 384 aa9.57□□□□□ -0.88
NUP50-214ENST00000469163 VSX1Q9NZR4 365 aaPredicted RBP9.57□□□□□ -0.88
NUP50-214ENST00000469163 GPN3Q9UHW5 284 aaPredicted RBP9.57□□□□□ -0.88
NUP50-214ENST00000469163 ELF5Q9UKW6 265 aaPredicted RBP9.57□□□□□ -0.88
NUP50-214ENST00000469163 MKLN1Q9UL63 735 aa9.57□□□□□ -0.88
NUP50-214ENST00000469163 LOC100506127A0A0U1RQW1 187 aa9.56□□□□□ -0.88
NUP50-214ENST00000469163 NPHS1O60500 1241 aa9.56□□□□□ -0.88
NUP50-214ENST00000469163 KDM4BO94953 1096 aa9.56□□□□□ -0.88
NUP50-214ENST00000469163 EPHX1P07099 455 aa9.56□□□□□ -0.88
NUP50-214ENST00000469163 HNRNPLP14866 589 aaKnown RBP eCLIP9.56□□□□□ -0.88
NUP50-214ENST00000469163 HMGA1P17096 107 aaKnown RBP9.56□□□□□ -0.88
NUP50-214ENST00000469163 FSHRP23945 695 aa9.56□□□□□ -0.88
NUP50-214ENST00000469163 MAP2K4P45985 399 aa9.56□□□□□ -0.88
NUP50-214ENST00000469163 QPRTQ15274 297 aa9.56□□□□□ -0.88
NUP50-214ENST00000469163 RBMS3Q6XE24 437 aaKnown RBP9.56□□□□□ -0.88
NUP50-214ENST00000469163 SLC41A1Q8IVJ1 513 aa9.56□□□□□ -0.88
NUP50-214ENST00000469163 RNASE11Q8TAA1 199 aaKnown RBP9.56□□□□□ -0.88
NUP50-214ENST00000469163 TRMT10AQ8TBZ6 339 aaKnown RBP9.56□□□□□ -0.88
NUP50-214ENST00000469163 TMEM174Q8WUU8 243 aa9.56□□□□□ -0.88
NUP50-214ENST00000469163 C10orf90Q96M02 699 aa9.56□□□□□ -0.88
NUP50-214ENST00000469163 HYLS1Q96M11 299 aa9.56□□□□□ -0.88
NUP50-214ENST00000469163 POLR1EQ9GZS1 481 aaKnown RBP9.56□□□□□ -0.88
NUP50-214ENST00000469163 TBC1D24Q9ULP9 559 aa9.56□□□□□ -0.88
NUP50-214ENST00000469163 PRKAB1Q9Y478 270 aa9.56□□□□□ -0.88
NUP50-214ENST00000469163 SHROOM3Q8TF72 1996 aa9.56□□□□□ -0.88
NUP50-214ENST00000469163 FAM74A7A6NL05 159 aa9.56□□□□□ -0.88
NUP50-214ENST00000469163 KIAA0355O15063 1070 aa9.56□□□□□ -0.88
NUP50-214ENST00000469163 RRP8O43159 456 aaKnown RBP9.56□□□□□ -0.88
NUP50-214ENST00000469163 CXCL10P02778 98 aa9.56□□□□□ -0.88
NUP50-214ENST00000469163 MPOP05164 745 aa9.56□□□□□ -0.88
NUP50-214ENST00000469163 RAC2P15153 192 aa9.56□□□□□ -0.88
NUP50-214ENST00000469163 RPS5P46782 204 aaKnown RBP9.56□□□□□ -0.88
NUP50-214ENST00000469163 KCNJ3P48549 501 aa9.56□□□□□ -0.88
NUP50-214ENST00000469163 MAZP56270 477 aaKnown RBP9.56□□□□□ -0.88
NUP50-214ENST00000469163 SGCGQ13326 291 aa9.56□□□□□ -0.88
NUP50-214ENST00000469163 DPY19L1Q2PZI1 675 aa9.56□□□□□ -0.88
NUP50-214ENST00000469163 AP5B1Q2VPB7 878 aa9.56□□□□□ -0.88
NUP50-214ENST00000469163 FAM74A3Q4VXF1 159 aa9.56□□□□□ -0.88
NUP50-214ENST00000469163 TMEM198Q66K66 360 aa9.56□□□□□ -0.88
NUP50-214ENST00000469163 RETREG3Q86VR2 466 aa9.56□□□□□ -0.88
NUP50-214ENST00000469163 OR5T2Q8NGG2 359 aa9.56□□□□□ -0.88
NUP50-214ENST00000469163 CSNK1G1Q9HCP0 422 aa9.56□□□□□ -0.88
NUP50-214ENST00000469163 ZMIZ1Q9ULJ6 1067 aa9.56□□□□□ -0.88
NUP50-214ENST00000469163 DNMT3AQ9Y6K1 912 aaPredicted RBP9.56□□□□□ -0.88
NUP50-214ENST00000469163 hCG_1807616A0A1W2PRN6 198 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms