RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 KIAA1217Q5T5P2 1943 aa4.38□□□□□ -1.71
LSM5-209ENST00000468872 GPRASP1Q5JY77 1395 aa4.38□□□□□ -1.71
LSM5-209ENST00000468872 SLC15A5A6NIM6 579 aa4.37□□□□□ -1.71
LSM5-209ENST00000468872 SRRM4A7MD48 611 aaKnown RBP4.37□□□□□ -1.71
LSM5-209ENST00000468872 LRCH4O75427 683 aa4.37□□□□□ -1.71
LSM5-209ENST00000468872 ODC1P11926 461 aa4.37□□□□□ -1.71
LSM5-209ENST00000468872 CTNNA2P26232 953 aa4.37□□□□□ -1.71
LSM5-209ENST00000468872 OPRL1P41146 370 aa4.37□□□□□ -1.71
LSM5-209ENST00000468872 SLC1A3P43003 542 aa4.37□□□□□ -1.71
LSM5-209ENST00000468872 LCP2Q13094 533 aa4.37□□□□□ -1.71
LSM5-209ENST00000468872 PDE7AQ13946 482 aa4.37□□□□□ -1.71
LSM5-209ENST00000468872 CEACAM7Q14002 265 aa4.37□□□□□ -1.71
LSM5-209ENST00000468872 TCEAL6Q6IPX3 200 aa4.37□□□□□ -1.71
LSM5-209ENST00000468872 TATDN1Q6P1N9 297 aa4.37□□□□□ -1.71
LSM5-209ENST00000468872 RABEPKQ7Z6M1 372 aa4.37□□□□□ -1.71
LSM5-209ENST00000468872 CATSPERDQ86XM0 798 aa4.37□□□□□ -1.71
LSM5-209ENST00000468872 CCDC185Q8N715 623 aa4.37□□□□□ -1.71
LSM5-209ENST00000468872 OR8H1Q8NGG4 311 aa4.37□□□□□ -1.71
LSM5-209ENST00000468872 ULK4Q96C45 1275 aa4.37□□□□□ -1.71
LSM5-209ENST00000468872 PCDHB18PQ96TA0 734 aa4.37□□□□□ -1.71
LSM5-209ENST00000468872 IL12RB2Q99665 862 aa4.37□□□□□ -1.71
LSM5-209ENST00000468872 CLEC7AQ9BXN2 247 aa4.37□□□□□ -1.71
LSM5-209ENST00000468872 LRRC2Q9BYS8 371 aa4.37□□□□□ -1.71
LSM5-209ENST00000468872 MTIF3Q9H2K0 278 aaKnown RBP4.37□□□□□ -1.71
LSM5-209ENST00000468872 FETUBQ9UGM5 382 aa4.37□□□□□ -1.71
LSM5-209ENST00000468872 PILRAQ9UKJ1 303 aa4.37□□□□□ -1.71
LSM5-209ENST00000468872 ETV7Q9Y603 341 aa4.37□□□□□ -1.71
LSM5-209ENST00000468872 NCOA1Q15788 1441 aa4.37□□□□□ -1.71
LSM5-209ENST00000468872 MAP3K4Q9Y6R4 1608 aa4.36□□□□□ -1.71
LSM5-209ENST00000468872 NKX6-3A6NJ46 265 aa4.36□□□□□ -1.71
LSM5-209ENST00000468872 CHUKO15111 745 aa4.36□□□□□ -1.71
LSM5-209ENST00000468872 PSMD3O43242 534 aa4.36□□□□□ -1.71
LSM5-209ENST00000468872 SYT7O43581 403 aa4.36□□□□□ -1.71
LSM5-209ENST00000468872 ECE2O60344 883 aa4.36□□□□□ -1.71
LSM5-209ENST00000468872 MAGEC1O60732 1142 aa4.36□□□□□ -1.71
LSM5-209ENST00000468872 BCAS2O75934 225 aaPredicted RBP4.36□□□□□ -1.71
LSM5-209ENST00000468872 ZFAND5O76080 213 aa4.36□□□□□ -1.71
LSM5-209ENST00000468872 STBD1O95210 358 aa4.36□□□□□ -1.71
LSM5-209ENST00000468872 CHRNGP07510 517 aa4.36□□□□□ -1.71
LSM5-209ENST00000468872 ABHD2P08910 425 aa4.36□□□□□ -1.71
LSM5-209ENST00000468872 ZNF26P17031 533 aaPredicted RBP4.36□□□□□ -1.71
LSM5-209ENST00000468872 HLA-FP30511 346 aa4.36□□□□□ -1.71
LSM5-209ENST00000468872 OR1D2P34982 312 aa4.36□□□□□ -1.71
LSM5-209ENST00000468872 TNFSF10P50591 281 aa4.36□□□□□ -1.71
LSM5-209ENST00000468872 GFPT1Q06210 699 aaPredicted RBP4.36□□□□□ -1.71
LSM5-209ENST00000468872 CNTN1Q12860 1018 aa4.36□□□□□ -1.71
LSM5-209ENST00000468872 GK2Q14410 553 aaPredicted RBP4.36□□□□□ -1.71
LSM5-209ENST00000468872 PKN2Q16513 984 aaKnown RBP4.36□□□□□ -1.71
LSM5-209ENST00000468872 SGSM1Q2NKQ1 1148 aa4.36□□□□□ -1.71
LSM5-209ENST00000468872 TMEM30BQ3MIR4 351 aa4.36□□□□□ -1.71
LSM5-209ENST00000468872 SPANXN4Q5MJ08 99 aa4.36□□□□□ -1.71
LSM5-209ENST00000468872 RAB12Q6IQ22 244 aa4.36□□□□□ -1.71
LSM5-209ENST00000468872 TOM1L2Q6ZVM7 507 aa4.36□□□□□ -1.71
LSM5-209ENST00000468872 OR13C5Q8NGS8 318 aa4.36□□□□□ -1.71
LSM5-209ENST00000468872 SPATA18Q8TC71 538 aa4.36□□□□□ -1.71
LSM5-209ENST00000468872 HAS2Q92819 552 aa4.36□□□□□ -1.71
LSM5-209ENST00000468872 CCDC47Q96A33 483 aaKnown RBP4.36□□□□□ -1.71
LSM5-209ENST00000468872 CFAP36Q96G28 342 aa4.36□□□□□ -1.71
LSM5-209ENST00000468872 SPATA13Q96N96 652 aa4.36□□□□□ -1.71
LSM5-209ENST00000468872 UBAC1Q9BSL1 405 aa4.36□□□□□ -1.71
LSM5-209ENST00000468872 NTMT1Q9BV86 223 aa4.36□□□□□ -1.71
LSM5-209ENST00000468872 WWTR1Q9GZV5 400 aa4.36□□□□□ -1.71
LSM5-209ENST00000468872 FNDC4Q9H6D8 234 aaPredicted RBP4.36□□□□□ -1.71
LSM5-209ENST00000468872 FGF22Q9HCT0 170 aa4.36□□□□□ -1.71
LSM5-209ENST00000468872 HMG20BQ9P0W2 317 aa4.36□□□□□ -1.71
LSM5-209ENST00000468872 DBF4Q9UBU7 674 aaPredicted RBP4.36□□□□□ -1.71
LSM5-209ENST00000468872 CACNG5Q9UF02 275 aa4.36□□□□□ -1.71
LSM5-209ENST00000468872 TRMT6Q9UJA5 497 aaKnown RBP4.36□□□□□ -1.71
LSM5-209ENST00000468872 MOSPD1Q9UJG1 213 aa4.36□□□□□ -1.71
LSM5-209ENST00000468872 PLCL2Q9UPR0 1127 aa4.36□□□□□ -1.71
LSM5-209ENST00000468872 TDRKHQ9Y2W6 561 aaKnown RBP4.36□□□□□ -1.71
LSM5-209ENST00000468872 RGS12O14924 1447 aa4.36□□□□□ -1.71
LSM5-209ENST00000468872 UHRF1BP1Q6BDS2 1440 aa4.36□□□□□ -1.71
LSM5-209ENST00000468872 PRG4Q92954 1404 aaPredicted RBP4.36□□□□□ -1.71
LSM5-209ENST00000468872 SHROOM2Q13796 1616 aa4.35□□□□□ -1.71
LSM5-209ENST00000468872 LMO7DNF2Z398 122 aa4.35□□□□□ -1.71
LSM5-209ENST00000468872 NR5A2O00482 541 aa4.35□□□□□ -1.71
LSM5-209ENST00000468872 SURF4O15260 269 aa4.35□□□□□ -1.71
LSM5-209ENST00000468872 CXCL14O95715 111 aa4.35□□□□□ -1.71
LSM5-209ENST00000468872 GAS8O95995 478 aa4.35□□□□□ -1.71
LSM5-209ENST00000468872 IGHEP01854 428 aa4.35□□□□□ -1.71
LSM5-209ENST00000468872 SKILP12757 684 aa4.35□□□□□ -1.71
LSM5-209ENST00000468872 B4GALT1P15291 398 aa4.35□□□□□ -1.71
LSM5-209ENST00000468872 UGT1A6P19224 532 aa4.35□□□□□ -1.71
LSM5-209ENST00000468872 ACKR3P25106 362 aa4.35□□□□□ -1.71
LSM5-209ENST00000468872 ATP12AP54707 1039 aa4.35□□□□□ -1.71
LSM5-209ENST00000468872 IRX4P78413 519 aa4.35□□□□□ -1.71
LSM5-209ENST00000468872 PLPP4Q5VZY2 271 aa4.35□□□□□ -1.71
LSM5-209ENST00000468872 ETFRF1Q6IPR1 90 aa4.35□□□□□ -1.71
LSM5-209ENST00000468872 CD164L2Q6UWJ8 174 aa4.35□□□□□ -1.71
LSM5-209ENST00000468872 STHQ8IWL8 128 aa4.35□□□□□ -1.71
LSM5-209ENST00000468872 DND1Q8IYX4 353 aaKnown RBP4.35□□□□□ -1.71
LSM5-209ENST00000468872 SLC22A15Q8IZD6 547 aa4.35□□□□□ -1.71
LSM5-209ENST00000468872 ZNF444Q8N0Y2 327 aaPredicted RBP4.35□□□□□ -1.71
LSM5-209ENST00000468872 SLC43A2Q8N370 569 aa4.35□□□□□ -1.71
LSM5-209ENST00000468872 WDSUB1Q8N9V3 476 aa4.35□□□□□ -1.71
LSM5-209ENST00000468872 TRPV3Q8NET8 790 aa4.35□□□□□ -1.71
LSM5-209ENST00000468872 OR5T2Q8NGG2 359 aa4.35□□□□□ -1.71
LSM5-209ENST00000468872 OR4D10Q8NGI6 311 aa4.35□□□□□ -1.71
LSM5-209ENST00000468872 SMPDL3AQ92484 453 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms