RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 NR2F1P10589 423 aa2.12□□□□□ -2.07
SSB-208ENST00000468600 KRT3P12035 628 aa2.12□□□□□ -2.07
SSB-208ENST00000468600 ZNF17P17021 662 aa2.12□□□□□ -2.07
SSB-208ENST00000468600 GPX3P22352 226 aa2.12□□□□□ -2.07
SSB-208ENST00000468600 MC5RP33032 325 aa2.12□□□□□ -2.07
SSB-208ENST00000468600 CDX1P47902 265 aaPredicted RBP2.12□□□□□ -2.07
SSB-208ENST00000468600 RAB28P51157 221 aa2.12□□□□□ -2.07
SSB-208ENST00000468600 HMGCS2P54868 508 aa2.12□□□□□ -2.07
SSB-208ENST00000468600 KIAA0040Q15053 153 aa2.12□□□□□ -2.07
SSB-208ENST00000468600 PPA1Q15181 289 aa2.12□□□□□ -2.07
SSB-208ENST00000468600 GSG1Q2KHT4 349 aa2.12□□□□□ -2.07
SSB-208ENST00000468600 LRRC37A5PQ49AS3 106 aa2.12□□□□□ -2.07
SSB-208ENST00000468600 ENPP7Q6UWV6 458 aa2.12□□□□□ -2.07
SSB-208ENST00000468600 Q71RC1 249 aaPredicted RBP2.12□□□□□ -2.07
SSB-208ENST00000468600 PIGWQ7Z7B1 504 aa2.12□□□□□ -2.07
SSB-208ENST00000468600 CARNMT1Q8N4J0 409 aa2.12□□□□□ -2.07
SSB-208ENST00000468600 ZNF781Q8N8C0 355 aa2.12□□□□□ -2.07
SSB-208ENST00000468600 XXYLT1Q8NBI6 393 aa2.12□□□□□ -2.07
SSB-208ENST00000468600 POGLUT1Q8NBL1 392 aa2.12□□□□□ -2.07
SSB-208ENST00000468600 CAMKVQ8NCB2 501 aa2.12□□□□□ -2.07
SSB-208ENST00000468600 NTNG2Q96CW9 530 aa2.12□□□□□ -2.07
SSB-208ENST00000468600 ZBED6CLQ96FA7 236 aaPredicted RBP2.12□□□□□ -2.07
SSB-208ENST00000468600 MCCC1Q96RQ3 725 aaPredicted RBP2.12□□□□□ -2.07
SSB-208ENST00000468600 CCDC68Q9H2F9 335 aa2.12□□□□□ -2.07
SSB-208ENST00000468600 SNX25Q9H3E2 840 aa2.12□□□□□ -2.07
SSB-208ENST00000468600 FN3KQ9H479 309 aa2.12□□□□□ -2.07
SSB-208ENST00000468600 RPF1Q9H9Y2 349 aaKnown RBP2.12□□□□□ -2.07
SSB-208ENST00000468600 PLEKHA3Q9HB20 300 aa2.12□□□□□ -2.07
SSB-208ENST00000468600 ZNF487B1APH4 448 aa2.11□□□□□ -2.07
SSB-208ENST00000468600 MLNRO43193 412 aa2.11□□□□□ -2.07
SSB-208ENST00000468600 TADA2AO75478 443 aa2.11□□□□□ -2.07
SSB-208ENST00000468600 ODC1P11926 461 aa2.11□□□□□ -2.07
SSB-208ENST00000468600 ACAT1P24752 427 aaKnown RBP2.11□□□□□ -2.07
SSB-208ENST00000468600 NNMTP40261 264 aa2.11□□□□□ -2.07
SSB-208ENST00000468600 RGS7P49802 495 aa2.11□□□□□ -2.07
SSB-208ENST00000468600 MFAP3P55082 362 aa2.11□□□□□ -2.07
SSB-208ENST00000468600 WNT4P56705 351 aa2.11□□□□□ -2.07
SSB-208ENST00000468600 RPS27AP62979 156 aaKnown RBP2.11□□□□□ -2.07
SSB-208ENST00000468600 CKAP4Q07065 602 aaKnown RBP2.11□□□□□ -2.07
SSB-208ENST00000468600 RBBP4Q09028 425 aa2.11□□□□□ -2.07
SSB-208ENST00000468600 RFTN2Q52LD8 501 aaPredicted RBP2.11□□□□□ -2.07
SSB-208ENST00000468600 C9orf152Q5JTZ5 239 aa2.11□□□□□ -2.07
SSB-208ENST00000468600 NRARPQ7Z6K4 114 aa2.11□□□□□ -2.07
SSB-208ENST00000468600 MFN1Q8IWA4 741 aa2.11□□□□□ -2.07
SSB-208ENST00000468600 POMGNT2Q8NAT1 580 aa2.11□□□□□ -2.07
SSB-208ENST00000468600 GRK7Q8WTQ7 553 aa2.11□□□□□ -2.07
SSB-208ENST00000468600 LIPHQ8WWY8 451 aa2.11□□□□□ -2.07
SSB-208ENST00000468600 EXT2Q93063 718 aa2.11□□□□□ -2.07
SSB-208ENST00000468600 HDAC11Q96DB2 347 aa2.11□□□□□ -2.07
SSB-208ENST00000468600 SENP1Q9P0U3 644 aa2.11□□□□□ -2.07
SSB-208ENST00000468600 RPS6KB2Q9UBS0 482 aa2.11□□□□□ -2.07
SSB-208ENST00000468600 HBS1LQ9Y450 684 aaKnown RBP2.11□□□□□ -2.07
SSB-208ENST00000468600 FAM169AQ9Y6X4 670 aa2.11□□□□□ -2.07
SSB-208ENST00000468600 EPOPA6NHQ4 379 aa2.1□□□□□ -2.07
SSB-208ENST00000468600 APBB3O95704 486 aa2.1□□□□□ -2.07
SSB-208ENST00000468600 ZNF133P52736 654 aaPredicted RBP2.1□□□□□ -2.07
SSB-208ENST00000468600 EIF5P55010 431 aaKnown RBP2.1□□□□□ -2.07
SSB-208ENST00000468600 ADARP55265 1226 aaKnown RBP2.1□□□□□ -2.07
SSB-208ENST00000468600 BACE1P56817 501 aa2.1□□□□□ -2.07
SSB-208ENST00000468600 CNTN1Q12860 1018 aa2.1□□□□□ -2.07
SSB-208ENST00000468600 ZNF542PQ5EBM4 170 aa2.1□□□□□ -2.07
SSB-208ENST00000468600 SPATA1Q5VX52 437 aa2.1□□□□□ -2.07
SSB-208ENST00000468600 PLPP4Q5VZY2 271 aa2.1□□□□□ -2.07
SSB-208ENST00000468600 MOXD1Q6UVY6 613 aa2.1□□□□□ -2.07
SSB-208ENST00000468600 CFAP57Q96MR6 1250 aa2.1□□□□□ -2.07
SSB-208ENST00000468600 TRIM7Q9C029 511 aa2.1□□□□□ -2.07
SSB-208ENST00000468600 UBQLN3Q9H347 655 aa2.1□□□□□ -2.07
SSB-208ENST00000468600 FZD8Q9H461 694 aa2.1□□□□□ -2.07
SSB-208ENST00000468600 MRGBPQ9NV56 204 aa2.1□□□□□ -2.07
SSB-208ENST00000468600 MOKQ9UQ07 419 aa2.1□□□□□ -2.07
SSB-208ENST00000468600 FBXO7Q9Y3I1 522 aa2.1□□□□□ -2.07
SSB-208ENST00000468600 KLK4Q9Y5K2 254 aa2.1□□□□□ -2.07
SSB-208ENST00000468600 A0A1W2PPW3 197 aa2.09□□□□□ -2.07
SSB-208ENST00000468600 TCP11X1B4DZS4 312 aa2.09□□□□□ -2.07
SSB-208ENST00000468600 ANHXE9PGG2 379 aa2.09□□□□□ -2.07
SSB-208ENST00000468600 PRAF2O60831 178 aa2.09□□□□□ -2.07
SSB-208ENST00000468600 PSMD10O75832 226 aa2.09□□□□□ -2.07
SSB-208ENST00000468600 ZNF853P0CG23 659 aa2.09□□□□□ -2.07
SSB-208ENST00000468600 MDKP21741 143 aaPredicted RBP2.09□□□□□ -2.07
SSB-208ENST00000468600 PSMA3P25788 255 aa2.09□□□□□ -2.07
SSB-208ENST00000468600 GDF1P27539 372 aa2.09□□□□□ -2.07
SSB-208ENST00000468600 ACTN2P35609 894 aa2.09□□□□□ -2.07
SSB-208ENST00000468600 FNTAP49354 379 aa2.09□□□□□ -2.07
SSB-208ENST00000468600 SLC25A1P53007 311 aa2.09□□□□□ -2.07
SSB-208ENST00000468600 TGIF1Q15583 401 aa2.09□□□□□ -2.07
SSB-208ENST00000468600 MAPK11Q15759 364 aa2.09□□□□□ -2.07
SSB-208ENST00000468600 BMP2KLQ5H9B9 411 aa2.09□□□□□ -2.07
SSB-208ENST00000468600 CELF3Q5SZQ8 465 aaKnown RBP2.09□□□□□ -2.07
SSB-208ENST00000468600 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.09□□□□□ -2.07
SSB-208ENST00000468600 CCDC71Q8IV32 467 aaPredicted RBP2.09□□□□□ -2.07
SSB-208ENST00000468600 CLEC1AQ8NC01 280 aa2.09□□□□□ -2.07
SSB-208ENST00000468600 C8orf46Q8TAG6 207 aa2.09□□□□□ -2.07
SSB-208ENST00000468600 ZNF564Q8TBZ8 553 aaPredicted RBP2.09□□□□□ -2.07
SSB-208ENST00000468600 FRAT1Q92837 279 aaPredicted RBP2.09□□□□□ -2.07
SSB-208ENST00000468600 MAGEB18Q96M61 343 aa2.09□□□□□ -2.07
SSB-208ENST00000468600 CTRCQ99895 268 aa2.09□□□□□ -2.07
SSB-208ENST00000468600 LIME1Q9H400 295 aa2.09□□□□□ -2.07
SSB-208ENST00000468600 C5orf66Q9H5L9 145 aa2.09□□□□□ -2.07
SSB-208ENST00000468600 AMBNQ9NP70 447 aa2.09□□□□□ -2.07
SSB-208ENST00000468600 PLSCR3Q9NRY6 295 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms