RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 TUBB3Q13509 450 aa6.53□□□□□ -1.36
SCAF4-204ENST00000467731 PWP1Q13610 501 aa6.53□□□□□ -1.36
SCAF4-204ENST00000467731 AP5B1Q2VPB7 878 aa6.53□□□□□ -1.36
SCAF4-204ENST00000467731 ADPRMQ3LIE5 342 aa6.53□□□□□ -1.36
SCAF4-204ENST00000467731 RFTN2Q52LD8 501 aaPredicted RBP6.53□□□□□ -1.36
SCAF4-204ENST00000467731 PDCD4Q53EL6 469 aaKnown RBP6.53□□□□□ -1.36
SCAF4-204ENST00000467731 C6orf136Q5SQH8 315 aa6.53□□□□□ -1.36
SCAF4-204ENST00000467731 DEPDC1Q5TB30 811 aa6.53□□□□□ -1.36
SCAF4-204ENST00000467731 HES3Q5TGS1 186 aa6.53□□□□□ -1.36
SCAF4-204ENST00000467731 TMEM198Q66K66 360 aa6.53□□□□□ -1.36
SCAF4-204ENST00000467731 ACAD11Q709F0 780 aa6.53□□□□□ -1.36
SCAF4-204ENST00000467731 CHSY3Q70JA7 882 aa6.53□□□□□ -1.36
SCAF4-204ENST00000467731 ZNF655Q8N720 491 aaPredicted RBP6.53□□□□□ -1.36
SCAF4-204ENST00000467731 CSNK1A1LQ8N752 337 aa6.53□□□□□ -1.36
SCAF4-204ENST00000467731 FNDC5Q8NAU1 212 aa6.53□□□□□ -1.36
SCAF4-204ENST00000467731 CEP70Q8NHQ1 597 aa6.53□□□□□ -1.36
SCAF4-204ENST00000467731 TMEM74Q96NL1 305 aa6.53□□□□□ -1.36
SCAF4-204ENST00000467731 PRPF18Q99633 342 aaKnown RBP6.53□□□□□ -1.36
SCAF4-204ENST00000467731 SLC6A16Q9GZN6 736 aa6.53□□□□□ -1.36
SCAF4-204ENST00000467731 FGF21Q9NSA1 209 aa6.53□□□□□ -1.36
SCAF4-204ENST00000467731 CDV3Q9UKY7 258 aaKnown RBP6.53□□□□□ -1.36
SCAF4-204ENST00000467731 APOBEC2Q9Y235 224 aaKnown RBP6.53□□□□□ -1.36
SCAF4-204ENST00000467731 RUVBL1Q9Y265 456 aaKnown RBP6.53□□□□□ -1.36
SCAF4-204ENST00000467731 A0A0G2JN53 185 aa6.52□□□□□ -1.37
SCAF4-204ENST00000467731 H3BMH7 237 aa6.52□□□□□ -1.37
SCAF4-204ENST00000467731 RTCAO00442 366 aaKnown RBP6.52□□□□□ -1.37
SCAF4-204ENST00000467731 PLPP1O14494 284 aa6.52□□□□□ -1.37
SCAF4-204ENST00000467731 ERI3O43414 337 aaKnown RBP6.52□□□□□ -1.37
SCAF4-204ENST00000467731 SEC22BO75396 215 aa6.52□□□□□ -1.37
SCAF4-204ENST00000467731 DKK1O94907 266 aa6.52□□□□□ -1.37
SCAF4-204ENST00000467731 ALDOCP09972 364 aaKnown RBP6.52□□□□□ -1.37
SCAF4-204ENST00000467731 PRR35P0CG20 571 aa6.52□□□□□ -1.37
SCAF4-204ENST00000467731 PRPH2P23942 346 aa6.52□□□□□ -1.37
SCAF4-204ENST00000467731 CCKBRP32239 447 aa6.52□□□□□ -1.37
SCAF4-204ENST00000467731 FOXM1Q08050 763 aa6.52□□□□□ -1.37
SCAF4-204ENST00000467731 KIAA0040Q15053 153 aa6.52□□□□□ -1.37
SCAF4-204ENST00000467731 CDCP2Q5VXM1 449 aa6.52□□□□□ -1.37
SCAF4-204ENST00000467731 ALYREFQ86V81 257 aaKnown RBP6.52□□□□□ -1.37
SCAF4-204ENST00000467731 AGBL5Q8NDL9 886 aa6.52□□□□□ -1.37
SCAF4-204ENST00000467731 OR1L3Q8NH93 324 aa6.52□□□□□ -1.37
SCAF4-204ENST00000467731 ZCCHC10Q8TBK6 192 aa6.52□□□□□ -1.37
SCAF4-204ENST00000467731 NT5CQ8TCD5 201 aa6.52□□□□□ -1.37
SCAF4-204ENST00000467731 ACTRT2Q8TDY3 377 aa6.52□□□□□ -1.37
SCAF4-204ENST00000467731 ZNF501Q96CX3 271 aaPredicted RBP6.52□□□□□ -1.37
SCAF4-204ENST00000467731 MS4A6EQ96DS6 147 aa6.52□□□□□ -1.37
SCAF4-204ENST00000467731 PPP3R2Q96LZ3 170 aa6.52□□□□□ -1.37
SCAF4-204ENST00000467731 ZNF285Q96NJ3 590 aa6.52□□□□□ -1.37
SCAF4-204ENST00000467731 OR6C1Q96RD1 312 aa6.52□□□□□ -1.37
SCAF4-204ENST00000467731 SERPINI1Q99574 410 aa6.52□□□□□ -1.37
SCAF4-204ENST00000467731 C17orf62Q9BQA9 187 aa6.52□□□□□ -1.37
SCAF4-204ENST00000467731 UQCC2Q9BRT2 126 aa6.52□□□□□ -1.37
SCAF4-204ENST00000467731 CENPKQ9BS16 269 aa6.52□□□□□ -1.37
SCAF4-204ENST00000467731 C1orf50Q9BV19 199 aa6.52□□□□□ -1.37
SCAF4-204ENST00000467731 SORBS1Q9BX66 1292 aaKnown RBP6.52□□□□□ -1.37
SCAF4-204ENST00000467731 SPRTNQ9H040 489 aaPredicted RBP6.52□□□□□ -1.37
SCAF4-204ENST00000467731 LRTM1Q9HBL6 345 aa6.52□□□□□ -1.37
SCAF4-204ENST00000467731 C1orf109Q9NX04 203 aa6.52□□□□□ -1.37
SCAF4-204ENST00000467731 OCIAD1Q9NX40 245 aa6.52□□□□□ -1.37
SCAF4-204ENST00000467731 SIDT1Q9NXL6 827 aaKnown RBP6.52□□□□□ -1.37
SCAF4-204ENST00000467731 POLR3HQ9Y535 204 aaPredicted RBP6.52□□□□□ -1.37
SCAF4-204ENST00000467731 AHCTF1Q8WYP5 2266 aa6.52□□□□□ -1.37
SCAF4-204ENST00000467731 CCDC88CQ9P219 2028 aa6.52□□□□□ -1.37
SCAF4-204ENST00000467731 CFAP47Q6ZTR5 3102 aa6.52□□□□□ -1.37
SCAF4-204ENST00000467731 hCG_2014768A0A024R1R8 64 aa6.52□□□□□ -1.37
SCAF4-204ENST00000467731 NPIPB8E9PQR5 432 aa6.52□□□□□ -1.37
SCAF4-204ENST00000467731 VPS4BO75351 444 aa6.52□□□□□ -1.37
SCAF4-204ENST00000467731 OR2B3O76000 313 aa6.52□□□□□ -1.37
SCAF4-204ENST00000467731 B3GALT4O96024 378 aa6.52□□□□□ -1.37
SCAF4-204ENST00000467731 MT-CO3P00414 261 aa6.52□□□□□ -1.37
SCAF4-204ENST00000467731 GBAP04062 536 aa6.52□□□□□ -1.37
SCAF4-204ENST00000467731 ZNF888P0CJ79 500 aaPredicted RBP6.52□□□□□ -1.37
SCAF4-204ENST00000467731 ATP6V1C1P21283 382 aa6.52□□□□□ -1.37
SCAF4-204ENST00000467731 RAP1GDS1P52306 607 aa6.52□□□□□ -1.37
SCAF4-204ENST00000467731 RAB8AP61006 207 aa6.52□□□□□ -1.37
SCAF4-204ENST00000467731 STXBP1P61764 594 aaKnown RBP6.52□□□□□ -1.37
SCAF4-204ENST00000467731 ACSM2AQ08AH3 577 aa6.52□□□□□ -1.37
SCAF4-204ENST00000467731 ISXQ2M1V0 245 aa6.52□□□□□ -1.37
SCAF4-204ENST00000467731 SPIN4Q56A73 249 aa6.52□□□□□ -1.37
SCAF4-204ENST00000467731 TOR1AIP1Q5JTV8 583 aa6.52□□□□□ -1.37
SCAF4-204ENST00000467731 TCTE1Q5JU00 501 aa6.52□□□□□ -1.37
SCAF4-204ENST00000467731 PRAMEF17Q5VTA0 474 aa6.52□□□□□ -1.37
SCAF4-204ENST00000467731 ACSM2BQ68CK6 577 aa6.52□□□□□ -1.37
SCAF4-204ENST00000467731 TMEM214Q6NUQ4 689 aaKnown RBP6.52□□□□□ -1.37
SCAF4-204ENST00000467731 COMMD6Q7Z4G1 85 aa6.52□□□□□ -1.37
SCAF4-204ENST00000467731 UBE3DQ7Z6J8 389 aa6.52□□□□□ -1.37
SCAF4-204ENST00000467731 KRT77Q7Z794 578 aa6.52□□□□□ -1.37
SCAF4-204ENST00000467731 C1orf52Q8N6N3 182 aaKnown RBP6.52□□□□□ -1.37
SCAF4-204ENST00000467731 OR2L5Q8NG80 312 aa6.52□□□□□ -1.37
SCAF4-204ENST00000467731 CHTF18Q8WVB6 975 aa6.52□□□□□ -1.37
SCAF4-204ENST00000467731 C11orf24Q96F05 449 aaPredicted RBP6.52□□□□□ -1.37
SCAF4-204ENST00000467731 MARK4Q96L34 752 aa6.52□□□□□ -1.37
SCAF4-204ENST00000467731 ZNF717Q9BY31 904 aaPredicted RBP6.52□□□□□ -1.37
SCAF4-204ENST00000467731 FANCEQ9HB96 536 aa6.52□□□□□ -1.37
SCAF4-204ENST00000467731 APMAPQ9HDC9 416 aa6.52□□□□□ -1.37
SCAF4-204ENST00000467731 LHX9Q9NQ69 397 aa6.52□□□□□ -1.37
SCAF4-204ENST00000467731 NMRK1Q9NWW6 199 aa6.52□□□□□ -1.37
SCAF4-204ENST00000467731 SCOCQ9UIL1 159 aa6.52□□□□□ -1.37
SCAF4-204ENST00000467731 CLCA2Q9UQC9 943 aa6.52□□□□□ -1.37
SCAF4-204ENST00000467731 MRPS2Q9Y399 296 aaKnown RBP6.52□□□□□ -1.37
SCAF4-204ENST00000467731 NUP214P35658 2090 aaPredicted RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms