RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 FAM155AB1AL88 458 aaPredicted RBP13.24□□□□□ -0.29
BRAT1-203ENST00000467558 H0YAE9 185 aa13.24□□□□□ -0.29
BRAT1-203ENST00000467558 PRLP01236 227 aa13.24□□□□□ -0.29
BRAT1-203ENST00000467558 VSX2P58304 361 aaPredicted RBP13.24□□□□□ -0.29
BRAT1-203ENST00000467558 CDKL1Q00532 357 aa13.24□□□□□ -0.29
BRAT1-203ENST00000467558 LCN1P1Q5VSP4 162 aa13.24□□□□□ -0.29
BRAT1-203ENST00000467558 OR5AR1Q8NGP9 310 aa13.24□□□□□ -0.29
BRAT1-203ENST00000467558 BBS10Q8TAM1 723 aa13.24□□□□□ -0.29
BRAT1-203ENST00000467558 TSACCQ96A04 125 aaPredicted RBP13.24□□□□□ -0.29
BRAT1-203ENST00000467558 ZDHHC12Q96GR4 267 aa13.24□□□□□ -0.29
BRAT1-203ENST00000467558 METTL2AQ96IZ6 378 aaKnown RBP13.24□□□□□ -0.29
BRAT1-203ENST00000467558 EURLQ9NYK6 297 aa13.24□□□□□ -0.29
BRAT1-203ENST00000467558 LINC01553A4QN01 128 aa13.23□□□□□ -0.29
BRAT1-203ENST00000467558 FAM170BA6NMN3 283 aa13.23□□□□□ -0.29
BRAT1-203ENST00000467558 A8MUA0 341 aa13.23□□□□□ -0.29
BRAT1-203ENST00000467558 RCBTB2O95199 551 aa13.23□□□□□ -0.29
BRAT1-203ENST00000467558 FHP07954 510 aa13.23□□□□□ -0.29
BRAT1-203ENST00000467558 EN2P19622 333 aaPredicted RBP13.23□□□□□ -0.29
BRAT1-203ENST00000467558 GPX3P22352 226 aa13.23□□□□□ -0.29
BRAT1-203ENST00000467558 CTC1Q2NKJ3 1217 aa13.23□□□□□ -0.29
BRAT1-203ENST00000467558 IKBIPQ70UQ0 350 aa13.23□□□□□ -0.29
BRAT1-203ENST00000467558 FAM3CQ92520 227 aa13.23□□□□□ -0.29
BRAT1-203ENST00000467558 PELI2Q9HAT8 420 aa13.23□□□□□ -0.29
BRAT1-203ENST00000467558 TUBA8Q9NY65 449 aaPredicted RBP13.23□□□□□ -0.29
BRAT1-203ENST00000467558 FEZF1A0PJY2 475 aa13.23□□□□□ -0.29
BRAT1-203ENST00000467558 ZNF860A6NHJ4 632 aa13.23□□□□□ -0.29
BRAT1-203ENST00000467558 H0YJX3 145 aa13.23□□□□□ -0.29
BRAT1-203ENST00000467558 LAMP1P11279 417 aa13.23□□□□□ -0.29
BRAT1-203ENST00000467558 AGXTP21549 392 aa13.23□□□□□ -0.29
BRAT1-203ENST00000467558 GJA4P35212 333 aa13.23□□□□□ -0.29
BRAT1-203ENST00000467558 SLC6A11P48066 632 aa13.23□□□□□ -0.29
BRAT1-203ENST00000467558 RPL6Q02878 288 aaKnown RBP13.23□□□□□ -0.29
BRAT1-203ENST00000467558 RCAN2Q14206 197 aa13.23□□□□□ -0.29
BRAT1-203ENST00000467558 DECR1Q16698 335 aa13.23□□□□□ -0.29
BRAT1-203ENST00000467558 C6orf120Q7Z4R8 191 aa13.23□□□□□ -0.29
BRAT1-203ENST00000467558 PDZD3Q86UT5 571 aa13.23□□□□□ -0.29
BRAT1-203ENST00000467558 PMEPA1Q969W9 287 aa13.23□□□□□ -0.29
BRAT1-203ENST00000467558 FBXL20Q96IG2 436 aa13.23□□□□□ -0.29
BRAT1-203ENST00000467558 C20orf27Q9GZN8 174 aa13.23□□□□□ -0.29
BRAT1-203ENST00000467558 KCNN2Q9H2S1 579 aa13.23□□□□□ -0.29
BRAT1-203ENST00000467558 EHD1Q9H4M9 534 aa13.23□□□□□ -0.29
BRAT1-203ENST00000467558 MGAT4BQ9UQ53 548 aa13.23□□□□□ -0.29
BRAT1-203ENST00000467558 GRXCR1A8MXD5 290 aa13.23□□□□□ -0.29
BRAT1-203ENST00000467558 ZNF217O75362 1048 aa13.23□□□□□ -0.29
BRAT1-203ENST00000467558 PIM1P11309 404 aaPredicted RBP13.23□□□□□ -0.29
BRAT1-203ENST00000467558 KCNAB2Q13303 367 aa13.23□□□□□ -0.29
BRAT1-203ENST00000467558 TIGD6Q17RP2 521 aa13.23□□□□□ -0.29
BRAT1-203ENST00000467558 CLEC12AQ5QGZ9 265 aa13.23□□□□□ -0.29
BRAT1-203ENST00000467558 ARHGAP40Q5TG30 622 aa13.23□□□□□ -0.29
BRAT1-203ENST00000467558 SLC30A6Q6NXT4 461 aa13.23□□□□□ -0.29
BRAT1-203ENST00000467558 SLC29A4Q7RTT9 530 aa13.23□□□□□ -0.29
BRAT1-203ENST00000467558 ATP6V1C2Q8NEY4 427 aa13.23□□□□□ -0.29
BRAT1-203ENST00000467558 KLHL6Q8WZ60 621 aa13.23□□□□□ -0.29
BRAT1-203ENST00000467558 ISL2Q96A47 359 aa13.23□□□□□ -0.29
BRAT1-203ENST00000467558 BRWD3Q6RI45 1802 aa13.23□□□□□ -0.29
BRAT1-203ENST00000467558 EMC8O43402 210 aa13.23□□□□□ -0.29
BRAT1-203ENST00000467558 CBFA2T3O75081 653 aa13.23□□□□□ -0.29
BRAT1-203ENST00000467558 APBB3O95704 486 aa13.23□□□□□ -0.29
BRAT1-203ENST00000467558 IL12AP29459 219 aa13.23□□□□□ -0.29
BRAT1-203ENST00000467558 RABIFP47224 123 aa13.23□□□□□ -0.29
BRAT1-203ENST00000467558 OR1E2P47887 323 aa13.23□□□□□ -0.29
BRAT1-203ENST00000467558 PRLHRP49683 370 aa13.23□□□□□ -0.29
BRAT1-203ENST00000467558 PGFP49763 221 aa13.23□□□□□ -0.29
BRAT1-203ENST00000467558 ARHGAP19Q14CB8 494 aa13.23□□□□□ -0.29
BRAT1-203ENST00000467558 CNPY1Q3B7I2 92 aa13.23□□□□□ -0.29
BRAT1-203ENST00000467558 INAVAQ3KP66 663 aa13.23□□□□□ -0.29
BRAT1-203ENST00000467558 KLHL17Q6TDP4 642 aa13.23□□□□□ -0.29
BRAT1-203ENST00000467558 OR10H4Q8NGA5 316 aa13.23□□□□□ -0.29
BRAT1-203ENST00000467558 CD207Q9UJ71 328 aa13.23□□□□□ -0.29
BRAT1-203ENST00000467558 DLEC1Q9Y238 1755 aa13.22□□□□□ -0.29
BRAT1-203ENST00000467558 CPSF4LA6NMK7 179 aaKnown RBP13.22□□□□□ -0.29
BRAT1-203ENST00000467558 A8MU76 341 aa13.22□□□□□ -0.29
BRAT1-203ENST00000467558 C9J4A7 227 aa13.22□□□□□ -0.29
BRAT1-203ENST00000467558 GNB5O14775 395 aa13.22□□□□□ -0.29
BRAT1-203ENST00000467558 CD36P16671 472 aa13.22□□□□□ -0.29
BRAT1-203ENST00000467558 SEPHS1P49903 392 aa13.22□□□□□ -0.29
BRAT1-203ENST00000467558 OR4C11Q6IEV9 310 aa13.22□□□□□ -0.29
BRAT1-203ENST00000467558 WDR83Q9BRX9 315 aaKnown RBP13.22□□□□□ -0.29
BRAT1-203ENST00000467558 IFT52Q9Y366 437 aa13.22□□□□□ -0.29
BRAT1-203ENST00000467558 WASH3PC4AMC7 463 aa13.22□□□□□ -0.29
BRAT1-203ENST00000467558 SCDO00767 359 aa13.22□□□□□ -0.29
BRAT1-203ENST00000467558 CACNG3O60359 315 aa13.22□□□□□ -0.29
BRAT1-203ENST00000467558 RASAL1O95294 804 aa13.22□□□□□ -0.29
BRAT1-203ENST00000467558 C1SP09871 688 aa13.22□□□□□ -0.29
BRAT1-203ENST00000467558 OR12D1P0DN82 309 aa13.22□□□□□ -0.29
BRAT1-203ENST00000467558 GGT1P19440 569 aa13.22□□□□□ -0.29
BRAT1-203ENST00000467558 EIF2B2P49770 351 aaKnown RBP13.22□□□□□ -0.29
BRAT1-203ENST00000467558 PSMD7P51665 324 aa13.22□□□□□ -0.29
BRAT1-203ENST00000467558 ID2Q02363 134 aa13.22□□□□□ -0.29
BRAT1-203ENST00000467558 LAPTM4AQ15012 233 aa13.22□□□□□ -0.29
BRAT1-203ENST00000467558 TRAM2Q15035 370 aa13.22□□□□□ -0.29
BRAT1-203ENST00000467558 PAGE3Q5JUK9 113 aa13.22□□□□□ -0.29
BRAT1-203ENST00000467558 PNCKQ6P2M8 343 aa13.22□□□□□ -0.29
BRAT1-203ENST00000467558 OR52E4Q8NGH9 312 aa13.22□□□□□ -0.29
BRAT1-203ENST00000467558 C16orf78Q8WTQ4 265 aa13.22□□□□□ -0.29
BRAT1-203ENST00000467558 MYLIPQ8WY64 445 aa13.22□□□□□ -0.29
BRAT1-203ENST00000467558 CRELD1Q96HD1 420 aa13.22□□□□□ -0.29
BRAT1-203ENST00000467558 APOOQ9BUR5 198 aa13.22□□□□□ -0.29
BRAT1-203ENST00000467558 MAGIXQ9H6Y5 334 aa13.22□□□□□ -0.29
BRAT1-203ENST00000467558 IL21RQ9HBE5 538 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms