RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 TPST1O60507 370 aa17.74■□□□□ 0.43
CAPN3-209ENST00000466222 HOXD12P35452 270 aa17.74■□□□□ 0.43
CAPN3-209ENST00000466222 NUP107P57740 925 aa17.74■□□□□ 0.43
CAPN3-209ENST00000466222 OR1D5P58170 312 aa17.74■□□□□ 0.43
CAPN3-209ENST00000466222 ABATP80404 500 aa17.74■□□□□ 0.43
CAPN3-209ENST00000466222 CYP4F3Q08477 520 aa17.74■□□□□ 0.43
CAPN3-209ENST00000466222 LAPTM5Q13571 262 aa17.74■□□□□ 0.43
CAPN3-209ENST00000466222 ZNF425Q6IV72 752 aa17.74■□□□□ 0.43
CAPN3-209ENST00000466222 ZC3H14Q6PJT7 736 aaKnown RBP17.74■□□□□ 0.43
CAPN3-209ENST00000466222 DHRS4L2Q6PKH6 230 aa17.74■□□□□ 0.43
CAPN3-209ENST00000466222 SPESP1Q6UW49 350 aa17.74■□□□□ 0.43
CAPN3-209ENST00000466222 IFNEQ86WN2 208 aa17.74■□□□□ 0.43
CAPN3-209ENST00000466222 RBM12BQ8IXT5 1001 aaKnown RBP17.74■□□□□ 0.43
CAPN3-209ENST00000466222 KRT78Q8N1N4 520 aa17.74■□□□□ 0.43
CAPN3-209ENST00000466222 OR8J3Q8NGG0 315 aa17.74■□□□□ 0.43
CAPN3-209ENST00000466222 PNPT1Q8TCS8 783 aaKnown RBP17.74■□□□□ 0.43
CAPN3-209ENST00000466222 SLC22A18Q96BI1 424 aa17.74■□□□□ 0.43
CAPN3-209ENST00000466222 APOLD1Q96LR9 279 aa17.74■□□□□ 0.43
CAPN3-209ENST00000466222 PPP3R2Q96LZ3 170 aa17.74■□□□□ 0.43
CAPN3-209ENST00000466222 DDX18Q9NVP1 670 aaKnown RBP17.74■□□□□ 0.43
CAPN3-209ENST00000466222 C1orf109Q9NX04 203 aa17.74■□□□□ 0.43
CAPN3-209ENST00000466222 VPS29Q9UBQ0 182 aa17.74■□□□□ 0.43
CAPN3-209ENST00000466222 AP3M1Q9Y2T2 418 aa17.74■□□□□ 0.43
CAPN3-209ENST00000466222 CEP192Q8TEP8 1941 aa17.74■□□□□ 0.43
CAPN3-209ENST00000466222 TDRD6O60522 2096 aaKnown RBP17.74■□□□□ 0.43
CAPN3-209ENST00000466222 RHPN2P1A8MT19 583 aa17.74■□□□□ 0.43
CAPN3-209ENST00000466222 C2orf74A8MZ97 194 aa17.74■□□□□ 0.43
CAPN3-209ENST00000466222 EI24O14681 340 aa17.74■□□□□ 0.43
CAPN3-209ENST00000466222 GBAP04062 536 aa17.74■□□□□ 0.43
CAPN3-209ENST00000466222 AMD1P17707 334 aa17.74■□□□□ 0.43
CAPN3-209ENST00000466222 JAK1P23458 1154 aa17.74■□□□□ 0.43
CAPN3-209ENST00000466222 IL12AP29459 219 aa17.74■□□□□ 0.43
CAPN3-209ENST00000466222 PPM1FP49593 454 aaPredicted RBP17.74■□□□□ 0.43
CAPN3-209ENST00000466222 HPCAP84074 193 aa17.74■□□□□ 0.43
CAPN3-209ENST00000466222 MAD2L1Q13257 205 aaPredicted RBP17.74■□□□□ 0.43
CAPN3-209ENST00000466222 DCTN2Q13561 401 aaKnown RBP17.74■□□□□ 0.43
CAPN3-209ENST00000466222 PWP1Q13610 501 aa17.74■□□□□ 0.43
CAPN3-209ENST00000466222 PTGR1Q14914 329 aa17.74■□□□□ 0.43
CAPN3-209ENST00000466222 ZIC1Q15915 447 aa17.74■□□□□ 0.43
CAPN3-209ENST00000466222 FCRL6Q6DN72 434 aa17.74■□□□□ 0.43
CAPN3-209ENST00000466222 DGLUCYQ7Z3D6 616 aa17.74■□□□□ 0.43
CAPN3-209ENST00000466222 OOSP2Q86WS3 158 aa17.74■□□□□ 0.43
CAPN3-209ENST00000466222 Q8N9G6 341 aaPredicted RBP17.74■□□□□ 0.43
CAPN3-209ENST00000466222 CLHC1Q8NHS4 586 aa17.74■□□□□ 0.43
CAPN3-209ENST00000466222 EBPLQ9BY08 206 aa17.74■□□□□ 0.43
CAPN3-209ENST00000466222 TMEM184CQ9NVA4 438 aa17.74■□□□□ 0.43
CAPN3-209ENST00000466222 ARHGEF17Q96PE2 2063 aaPredicted RBP17.74■□□□□ 0.43
CAPN3-209ENST00000466222 FANCMQ8IYD8 2048 aa17.73■□□□□ 0.43
CAPN3-209ENST00000466222 SIGLEC6O43699 453 aa17.73■□□□□ 0.43
CAPN3-209ENST00000466222 SH3BP5O60239 455 aa17.73■□□□□ 0.43
CAPN3-209ENST00000466222 CTSVO60911 334 aa17.73■□□□□ 0.43
CAPN3-209ENST00000466222 RSL1D1O76021 490 aaKnown RBP17.73■□□□□ 0.43
CAPN3-209ENST00000466222 SERPIND1P05546 499 aa17.73■□□□□ 0.43
CAPN3-209ENST00000466222 ENGP17813 658 aa17.73■□□□□ 0.43
CAPN3-209ENST00000466222 HRH2P25021 359 aa17.73■□□□□ 0.43
CAPN3-209ENST00000466222 TACR1P25103 407 aa17.73■□□□□ 0.43
CAPN3-209ENST00000466222 PCSK6P29122 969 aa17.73■□□□□ 0.43
CAPN3-209ENST00000466222 FBXO42Q6P3S6 717 aa17.73■□□□□ 0.43
CAPN3-209ENST00000466222 USP51Q70EK9 711 aa17.73■□□□□ 0.43
CAPN3-209ENST00000466222 EID2Q8N6I1 236 aa17.73■□□□□ 0.43
CAPN3-209ENST00000466222 ZNF420Q8TAQ5 688 aaPredicted RBP17.73■□□□□ 0.43
CAPN3-209ENST00000466222 POP5Q969H6 163 aaKnown RBP17.73■□□□□ 0.43
CAPN3-209ENST00000466222 SORBS1Q9BX66 1292 aaKnown RBP17.73■□□□□ 0.43
CAPN3-209ENST00000466222 ABCG4Q9H172 646 aa17.73■□□□□ 0.43
CAPN3-209ENST00000466222 ACTL8Q9H568 366 aa17.73■□□□□ 0.43
CAPN3-209ENST00000466222 RPF2Q9H7B2 306 aaKnown RBP17.73■□□□□ 0.43
CAPN3-209ENST00000466222 LY6G6EA0A0G2JKS1 128 aa17.72■□□□□ 0.43
CAPN3-209ENST00000466222 SERTM1A2A2V5 107 aa17.72■□□□□ 0.43
CAPN3-209ENST00000466222 FAM221BA6H8Z2 402 aa17.72■□□□□ 0.43
CAPN3-209ENST00000466222 GMNNO75496 209 aa17.72■□□□□ 0.43
CAPN3-209ENST00000466222 PROS1P07225 676 aa17.72■□□□□ 0.43
CAPN3-209ENST00000466222 CDK4P11802 303 aa17.72■□□□□ 0.43
CAPN3-209ENST00000466222 NELFEP18615 380 aaKnown RBP17.72■□□□□ 0.43
CAPN3-209ENST00000466222 GFERP55789 205 aa17.72■□□□□ 0.43
CAPN3-209ENST00000466222 SNRPNP63162 240 aaKnown RBP17.72■□□□□ 0.43
CAPN3-209ENST00000466222 CSTF3Q12996 717 aaKnown RBP17.72■□□□□ 0.43
CAPN3-209ENST00000466222 AMZ1Q400G9 498 aa17.72■□□□□ 0.43
CAPN3-209ENST00000466222 GLYATQ6IB77 296 aa17.72■□□□□ 0.43
CAPN3-209ENST00000466222 CYP20A1Q6UW02 462 aa17.72■□□□□ 0.43
CAPN3-209ENST00000466222 DLEU7Q6UYE1 221 aa17.72■□□□□ 0.43
CAPN3-209ENST00000466222 FAM92BQ6ZTR7 304 aa17.72■□□□□ 0.43
CAPN3-209ENST00000466222 PAQR7Q86WK9 346 aa17.72■□□□□ 0.43
CAPN3-209ENST00000466222 RIMKLAQ8IXN7 391 aa17.72■□□□□ 0.43
CAPN3-209ENST00000466222 B4GALNT2Q8NHY0 566 aa17.72■□□□□ 0.43
CAPN3-209ENST00000466222 CYGBQ8WWM9 190 aa17.72■□□□□ 0.43
CAPN3-209ENST00000466222 TMIGD2Q96BF3 282 aa17.72■□□□□ 0.43
CAPN3-209ENST00000466222 REPS1Q96D71 796 aa17.72■□□□□ 0.43
CAPN3-209ENST00000466222 EGLN2Q96KS0 407 aa17.72■□□□□ 0.43
CAPN3-209ENST00000466222 CCDC115Q96NT0 180 aa17.72■□□□□ 0.43
CAPN3-209ENST00000466222 F2RL3Q96RI0 385 aa17.72■□□□□ 0.43
CAPN3-209ENST00000466222 ZBTB18Q99592 522 aa17.72■□□□□ 0.43
CAPN3-209ENST00000466222 CGREF1Q99674 301 aa17.72■□□□□ 0.43
CAPN3-209ENST00000466222 NLGN3Q9NZ94 848 aa17.72■□□□□ 0.43
CAPN3-209ENST00000466222 U3KQA8 63 aa17.72■□□□□ 0.43
CAPN3-209ENST00000466222 ANKDD1BA6NHY2 528 aa17.72■□□□□ 0.43
CAPN3-209ENST00000466222 FOXE1O00358 373 aaPredicted RBP17.72■□□□□ 0.43
CAPN3-209ENST00000466222 RTCAO00442 366 aaKnown RBP17.72■□□□□ 0.43
CAPN3-209ENST00000466222 B4GAT1O43505 415 aa17.72■□□□□ 0.43
CAPN3-209ENST00000466222 HCRTR1O43613 425 aa17.72■□□□□ 0.43
CAPN3-209ENST00000466222 DEAF1O75398 565 aaPredicted RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms