RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 PCDHGB6Q9Y5F9 930 aa24.22■■□□□ 1.47
U2AF1-206ENST00000464750 STSP08842 583 aa24.21■■□□□ 1.47
U2AF1-206ENST00000464750 MST1P26927 711 aa24.21■■□□□ 1.47
U2AF1-206ENST00000464750 CERS1P27544 350 aa24.21■■□□□ 1.47
U2AF1-206ENST00000464750 PER3P56645 1201 aa24.21■■□□□ 1.47
U2AF1-206ENST00000464750 OC90Q02509 493 aaPredicted RBP24.21■■□□□ 1.47
U2AF1-206ENST00000464750 LAPTM5Q13571 262 aa24.21■■□□□ 1.47
U2AF1-206ENST00000464750 WHAMMP3Q1A5X7 153 aa24.21■■□□□ 1.47
U2AF1-206ENST00000464750 GFRALQ6UXV0 394 aa24.21■■□□□ 1.47
U2AF1-206ENST00000464750 RPS19BP1Q86WX3 136 aaKnown RBP24.21■■□□□ 1.47
U2AF1-206ENST00000464750 FAM47BQ8NA70 645 aa24.21■■□□□ 1.47
U2AF1-206ENST00000464750 NFAM1Q8NET5 270 aaPredicted RBP24.21■■□□□ 1.47
U2AF1-206ENST00000464750 ADAMTS18Q8TE60 1221 aa24.21■■□□□ 1.47
U2AF1-206ENST00000464750 UBTD2Q8WUN7 234 aa24.21■■□□□ 1.47
U2AF1-206ENST00000464750 KCTD4Q8WVF5 259 aa24.21■■□□□ 1.47
U2AF1-206ENST00000464750 NXNL1Q96CM4 212 aa24.21■■□□□ 1.47
U2AF1-206ENST00000464750 KLHL1Q9NR64 748 aa24.21■■□□□ 1.47
U2AF1-206ENST00000464750 PRTFDC1Q9NRG1 225 aa24.21■■□□□ 1.47
U2AF1-206ENST00000464750 ACOT9Q9Y305 439 aa24.21■■□□□ 1.47
U2AF1-206ENST00000464750 UNC79Q9P2D8 2635 aa24.21■■□□□ 1.47
U2AF1-206ENST00000464750 HNRNPFP52597 415 aaKnown RBP24.2■■□□□ 1.46
U2AF1-206ENST00000464750 MTTPP55157 894 aa24.2■■□□□ 1.46
U2AF1-206ENST00000464750 IRF9Q00978 393 aa24.2■■□□□ 1.46
U2AF1-206ENST00000464750 TBCCQ15814 346 aa24.2■■□□□ 1.46
U2AF1-206ENST00000464750 HIST2H2ACQ16777 129 aaPredicted RBP24.2■■□□□ 1.46
U2AF1-206ENST00000464750 MROH9Q5TGP6 573 aa24.2■■□□□ 1.46
U2AF1-206ENST00000464750 HIST2H2AA3Q6FI13 130 aa24.2■■□□□ 1.46
U2AF1-206ENST00000464750 SPINK14Q6IE38 97 aa24.2■■□□□ 1.46
U2AF1-206ENST00000464750 ABHD17CQ6PCB6 329 aa24.2■■□□□ 1.46
U2AF1-206ENST00000464750 CENPLQ8N0S6 344 aaPredicted RBP24.2■■□□□ 1.46
U2AF1-206ENST00000464750 TMEM52Q8NDY8 209 aa24.2■■□□□ 1.46
U2AF1-206ENST00000464750 SCMH1Q96GD3 660 aa24.2■■□□□ 1.46
U2AF1-206ENST00000464750 SERINC2Q96SA4 455 aa24.2■■□□□ 1.46
U2AF1-206ENST00000464750 PRM3Q9NNZ6 103 aa24.2■■□□□ 1.46
U2AF1-206ENST00000464750 OPTCQ9UBM4 332 aa24.2■■□□□ 1.46
U2AF1-206ENST00000464750 MRPS33Q9Y291 106 aaKnown RBP24.2■■□□□ 1.46
U2AF1-206ENST00000464750 A0A087X1B8 175 aa24.19■■□□□ 1.46
U2AF1-206ENST00000464750 MYO1DO94832 1006 aa24.19■■□□□ 1.46
U2AF1-206ENST00000464750 UNC5CO95185 931 aa24.19■■□□□ 1.46
U2AF1-206ENST00000464750 CD46P15529 392 aa24.19■■□□□ 1.46
U2AF1-206ENST00000464750 TPP2P29144 1249 aaPredicted RBP24.19■■□□□ 1.46
U2AF1-206ENST00000464750 MSH2P43246 934 aa24.19■■□□□ 1.46
U2AF1-206ENST00000464750 TGM3Q08188 693 aa24.19■■□□□ 1.46
U2AF1-206ENST00000464750 UAP1Q16222 522 aaPredicted RBP24.19■■□□□ 1.46
U2AF1-206ENST00000464750 C1QL3Q5VWW1 255 aa24.19■■□□□ 1.46
U2AF1-206ENST00000464750 F2RL3Q96RI0 385 aa24.19■■□□□ 1.46
U2AF1-206ENST00000464750 CSF3RQ99062 836 aa24.19■■□□□ 1.46
U2AF1-206ENST00000464750 SNX15Q9NRS6 342 aa24.19■■□□□ 1.46
U2AF1-206ENST00000464750 NINJ2Q9NZG7 142 aa24.19■■□□□ 1.46
U2AF1-206ENST00000464750 LRFN1Q9P244 771 aa24.19■■□□□ 1.46
U2AF1-206ENST00000464750 SEC14L3Q9UDX4 400 aa24.19■■□□□ 1.46
U2AF1-206ENST00000464750 TGFBR3LH3BV60 316 aa24.18■■□□□ 1.46
U2AF1-206ENST00000464750 K7EPI3 171 aa24.18■■□□□ 1.46
U2AF1-206ENST00000464750 CLDN4O14493 209 aa24.18■■□□□ 1.46
U2AF1-206ENST00000464750 EEF1DP29692 281 aaKnown RBP24.18■■□□□ 1.46
U2AF1-206ENST00000464750 PHBP35232 272 aa24.18■■□□□ 1.46
U2AF1-206ENST00000464750 LIM2P55344 173 aa24.18■■□□□ 1.46
U2AF1-206ENST00000464750 HSD17B7P56937 341 aa24.18■■□□□ 1.46
U2AF1-206ENST00000464750 SLC13A2Q13183 592 aa24.18■■□□□ 1.46
U2AF1-206ENST00000464750 E2F2Q14209 437 aa24.18■■□□□ 1.46
U2AF1-206ENST00000464750 UBAP2Q5T6F2 1119 aaKnown RBP24.18■■□□□ 1.46
U2AF1-206ENST00000464750 ZNF468Q5VIY5 522 aaPredicted RBP24.18■■□□□ 1.46
U2AF1-206ENST00000464750 CCDC91Q7Z6B0 441 aa24.18■■□□□ 1.46
U2AF1-206ENST00000464750 FJX1Q86VR8 437 aa24.18■■□□□ 1.46
U2AF1-206ENST00000464750 HORMAD2Q8N7B1 307 aa24.18■■□□□ 1.46
U2AF1-206ENST00000464750 TMEM178AQ8NBL3 297 aa24.18■■□□□ 1.46
U2AF1-206ENST00000464750 B3GNT7Q8NFL0 401 aa24.18■■□□□ 1.46
U2AF1-206ENST00000464750 MS4A8Q9BY19 250 aa24.18■■□□□ 1.46
U2AF1-206ENST00000464750 PNO1Q9NRX1 252 aaKnown RBP24.18■■□□□ 1.46
U2AF1-206ENST00000464750 DAPP1Q9UN19 280 aa24.18■■□□□ 1.46
U2AF1-206ENST00000464750 CLDN16Q9Y5I7 305 aa24.18■■□□□ 1.46
U2AF1-206ENST00000464750 TRBV11-1A0A0K0K1C0 115 aa24.17■■□□□ 1.46
U2AF1-206ENST00000464750 A0A1B0GUH1 482 aa24.17■■□□□ 1.46
U2AF1-206ENST00000464750 HMX2A2RU54 273 aa24.17■■□□□ 1.46
U2AF1-206ENST00000464750 SYCE1LA8MT33 242 aa24.17■■□□□ 1.46
U2AF1-206ENST00000464750 NEURL1O76050 574 aa24.17■■□□□ 1.46
U2AF1-206ENST00000464750 C2P06681 752 aa24.17■■□□□ 1.46
U2AF1-206ENST00000464750 PPP2R1BP30154 601 aa24.17■■□□□ 1.46
U2AF1-206ENST00000464750 CASP2P42575 452 aa24.17■■□□□ 1.46
U2AF1-206ENST00000464750 MLF1P58340 268 aa24.17■■□□□ 1.46
U2AF1-206ENST00000464750 TERF2Q15554 542 aa24.17■■□□□ 1.46
U2AF1-206ENST00000464750 FAM83EQ2M2I3 478 aa24.17■■□□□ 1.46
U2AF1-206ENST00000464750 ZNF595Q8IYB9 648 aa24.17■■□□□ 1.46
U2AF1-206ENST00000464750 APCDD1LQ8NCL9 501 aa24.17■■□□□ 1.46
U2AF1-206ENST00000464750 RHEBL1Q8TAI7 183 aa24.17■■□□□ 1.46
U2AF1-206ENST00000464750 ZNF473Q8WTR7 871 aaKnown RBP24.17■■□□□ 1.46
U2AF1-206ENST00000464750 ZNF592Q92610 1267 aa24.17■■□□□ 1.46
U2AF1-206ENST00000464750 UBE2E3Q969T4 207 aa24.17■■□□□ 1.46
U2AF1-206ENST00000464750 KCNC2Q96PR1 638 aa24.17■■□□□ 1.46
U2AF1-206ENST00000464750 DEFB126Q9BYW3 111 aa24.17■■□□□ 1.46
U2AF1-206ENST00000464750 MTRF1LQ9UGC7 380 aaKnown RBP24.17■■□□□ 1.46
U2AF1-206ENST00000464750 MYO7BQ6PIF6 2116 aa24.17■■□□□ 1.46
U2AF1-206ENST00000464750 CDK2AP1O14519 115 aa24.16■■□□□ 1.46
U2AF1-206ENST00000464750 PCNAP12004 261 aa24.16■■□□□ 1.46
U2AF1-206ENST00000464750 MTHFD2P13995 350 aa24.16■■□□□ 1.46
U2AF1-206ENST00000464750 COL8A1P27658 744 aa24.16■■□□□ 1.46
U2AF1-206ENST00000464750 CLCN2P51788 898 aa24.16■■□□□ 1.46
U2AF1-206ENST00000464750 RCN2Q14257 317 aa24.16■■□□□ 1.46
U2AF1-206ENST00000464750 MED27Q6P2C8 311 aa24.16■■□□□ 1.46
U2AF1-206ENST00000464750 CEP128Q6ZU80 1094 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms