RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 APOA4P06727 396 aa12.18□□□□□ -0.46
C9orf3-211ENST00000463372 HSP90AA1P07900 732 aaKnown RBP12.18□□□□□ -0.46
C9orf3-211ENST00000463372 CCR7P32248 378 aa12.18□□□□□ -0.46
C9orf3-211ENST00000463372 SLCO1A2P46721 670 aa12.18□□□□□ -0.46
C9orf3-211ENST00000463372 PRDX1Q06830 199 aaKnown RBP12.18□□□□□ -0.46
C9orf3-211ENST00000463372 ITIH4Q14624 930 aa12.18□□□□□ -0.46
C9orf3-211ENST00000463372 TERF2Q15554 542 aa12.18□□□□□ -0.46
C9orf3-211ENST00000463372 SLC22A10Q63ZE4 541 aa12.18□□□□□ -0.46
C9orf3-211ENST00000463372 ICE2Q659A1 982 aa12.18□□□□□ -0.46
C9orf3-211ENST00000463372 OPN5Q6U736 354 aa12.18□□□□□ -0.46
C9orf3-211ENST00000463372 PACS1Q6VY07 963 aa12.18□□□□□ -0.46
C9orf3-211ENST00000463372 PIANPQ8IYJ0 282 aa12.18□□□□□ -0.46
C9orf3-211ENST00000463372 NIPA2Q8N8Q9 360 aa12.18□□□□□ -0.46
C9orf3-211ENST00000463372 SEMA6DQ8NFY4 1073 aa12.18□□□□□ -0.46
C9orf3-211ENST00000463372 ZPLD1Q8TCW7 415 aa12.18□□□□□ -0.46
C9orf3-211ENST00000463372 MAGEC3Q8TD91 643 aa12.18□□□□□ -0.46
C9orf3-211ENST00000463372 SMAP2Q8WU79 429 aaPredicted RBP12.18□□□□□ -0.46
C9orf3-211ENST00000463372 KAT2AQ92830 837 aa12.18□□□□□ -0.46
C9orf3-211ENST00000463372 PLPPR2Q96GM1 343 aa12.18□□□□□ -0.46
C9orf3-211ENST00000463372 WDYHV1Q96HA8 205 aa12.18□□□□□ -0.46
C9orf3-211ENST00000463372 KRT12Q99456 494 aa12.18□□□□□ -0.46
C9orf3-211ENST00000463372 EBNA1BP2Q99848 306 aaKnown RBP12.18□□□□□ -0.46
C9orf3-211ENST00000463372 TSSK1BQ9BXA7 367 aa12.18□□□□□ -0.46
C9orf3-211ENST00000463372 PRDM9Q9NQV7 894 aa12.18□□□□□ -0.46
C9orf3-211ENST00000463372 SPATA7Q9P0W8 599 aa12.18□□□□□ -0.46
C9orf3-211ENST00000463372 TAC3Q9UHF0 121 aa12.18□□□□□ -0.46
C9orf3-211ENST00000463372 IP6K2Q9UHH9 426 aa12.18□□□□□ -0.46
C9orf3-211ENST00000463372 A0A1W2PP18 115 aa12.17□□□□□ -0.46
C9orf3-211ENST00000463372 LINC01387J3KSC0 135 aa12.17□□□□□ -0.46
C9orf3-211ENST00000463372 C1orf105O95561 183 aa12.17□□□□□ -0.46
C9orf3-211ENST00000463372 CCDC172P0C7W6 258 aa12.17□□□□□ -0.46
C9orf3-211ENST00000463372 DANCRP0C864 163 aa12.17□□□□□ -0.46
C9orf3-211ENST00000463372 USF1P22415 310 aaPredicted RBP12.17□□□□□ -0.46
C9orf3-211ENST00000463372 TBL3Q12788 808 aaKnown RBP12.17□□□□□ -0.46
C9orf3-211ENST00000463372 CR1LQ2VPA4 569 aa12.17□□□□□ -0.46
C9orf3-211ENST00000463372 AWAT1Q58HT5 328 aa12.17□□□□□ -0.46
C9orf3-211ENST00000463372 ANKRD34AQ69YU3 496 aa12.17□□□□□ -0.46
C9orf3-211ENST00000463372 PLD5Q8N7P1 536 aa12.17□□□□□ -0.46
C9orf3-211ENST00000463372 CAMKVQ8NCB2 501 aa12.17□□□□□ -0.46
C9orf3-211ENST00000463372 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.17□□□□□ -0.46
C9orf3-211ENST00000463372 FAM216AQ8WUB2 273 aa12.17□□□□□ -0.46
C9orf3-211ENST00000463372 SREK1Q8WXA9 508 aaKnown RBP12.17□□□□□ -0.46
C9orf3-211ENST00000463372 SMPDL3AQ92484 453 aa12.17□□□□□ -0.46
C9orf3-211ENST00000463372 REPS1Q96D71 796 aa12.17□□□□□ -0.46
C9orf3-211ENST00000463372 CCDC138Q96M89 665 aa12.17□□□□□ -0.46
C9orf3-211ENST00000463372 FCRL5Q96RD9 977 aa12.17□□□□□ -0.46
C9orf3-211ENST00000463372 TMEM204Q9BSN7 226 aa12.17□□□□□ -0.46
C9orf3-211ENST00000463372 ZNF747Q9BV97 191 aa12.17□□□□□ -0.46
C9orf3-211ENST00000463372 ALG2Q9H553 416 aa12.17□□□□□ -0.46
C9orf3-211ENST00000463372 MANSC1Q9H8J5 431 aa12.17□□□□□ -0.46
C9orf3-211ENST00000463372 PNO1Q9NRX1 252 aaKnown RBP12.17□□□□□ -0.46
C9orf3-211ENST00000463372 AIPL1Q9NZN9 384 aa12.17□□□□□ -0.46
C9orf3-211ENST00000463372 KLHL8Q9P2G9 620 aaPredicted RBP12.17□□□□□ -0.46
C9orf3-211ENST00000463372 MAPRE3Q9UPY8 281 aa12.17□□□□□ -0.46
C9orf3-211ENST00000463372 WBP11Q9Y2W2 641 aaKnown RBP12.17□□□□□ -0.46
C9orf3-211ENST00000463372 SLC6A5Q9Y345 797 aa12.17□□□□□ -0.46
C9orf3-211ENST00000463372 FRG2CA6NGY1 282 aa12.16□□□□□ -0.46
C9orf3-211ENST00000463372 LRRC3CA6NJW4 275 aa12.16□□□□□ -0.46
C9orf3-211ENST00000463372 CHST10O43529 356 aa12.16□□□□□ -0.46
C9orf3-211ENST00000463372 GPC4O75487 556 aa12.16□□□□□ -0.46
C9orf3-211ENST00000463372 MYBL1P10243 752 aa12.16□□□□□ -0.46
C9orf3-211ENST00000463372 GPR143P51810 404 aa12.16□□□□□ -0.46
C9orf3-211ENST00000463372 SKP1P63208 163 aa12.16□□□□□ -0.46
C9orf3-211ENST00000463372 TMED2Q15363 201 aa12.16□□□□□ -0.46
C9orf3-211ENST00000463372 PHKG1Q16816 387 aa12.16□□□□□ -0.46
C9orf3-211ENST00000463372 PRAMEF20Q5VT98 475 aa12.16□□□□□ -0.46
C9orf3-211ENST00000463372 SCIMPQ6UWF3 145 aa12.16□□□□□ -0.46
C9orf3-211ENST00000463372 C22orf34Q6ZV56 151 aa12.16□□□□□ -0.46
C9orf3-211ENST00000463372 MICALCLQ6ZW33 695 aa12.16□□□□□ -0.46
C9orf3-211ENST00000463372 VN1R4Q7Z5H5 301 aa12.16□□□□□ -0.46
C9orf3-211ENST00000463372 KCT2Q8NC54 265 aa12.16□□□□□ -0.46
C9orf3-211ENST00000463372 WNT2BQ93097 391 aa12.16□□□□□ -0.46
C9orf3-211ENST00000463372 TRIM11Q96F44 468 aa12.16□□□□□ -0.46
C9orf3-211ENST00000463372 DNAJC1Q96KC8 554 aaKnown RBP12.16□□□□□ -0.46
C9orf3-211ENST00000463372 RNF157Q96PX1 679 aa12.16□□□□□ -0.46
C9orf3-211ENST00000463372 UGT2B28Q9BY64 529 aa12.16□□□□□ -0.46
C9orf3-211ENST00000463372 ADAP2Q9NPF8 381 aa12.16□□□□□ -0.46
C9orf3-211ENST00000463372 NECTIN3Q9NQS3 549 aa12.16□□□□□ -0.46
C9orf3-211ENST00000463372 PPIEQ9UNP9 301 aaKnown RBP12.16□□□□□ -0.46
C9orf3-211ENST00000463372 IGKV3D-11A0A0A0MRZ8 115 aa12.15□□□□□ -0.46
C9orf3-211ENST00000463372 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.15□□□□□ -0.46
C9orf3-211ENST00000463372 A0A1W2PNV4 684 aa12.15□□□□□ -0.46
C9orf3-211ENST00000463372 AVILO75366 819 aa12.15□□□□□ -0.46
C9orf3-211ENST00000463372 TNFSF13O75888 250 aa12.15□□□□□ -0.46
C9orf3-211ENST00000463372 HK2P52789 917 aa12.15□□□□□ -0.46
C9orf3-211ENST00000463372 RPS15AP62244 130 aaKnown RBP12.15□□□□□ -0.46
C9orf3-211ENST00000463372 OLR1P78380 273 aa12.15□□□□□ -0.46
C9orf3-211ENST00000463372 PCDH1Q08174 1060 aa12.15□□□□□ -0.46
C9orf3-211ENST00000463372 HERC3Q15034 1050 aa12.15□□□□□ -0.46
C9orf3-211ENST00000463372 NHSL2Q5HYW2 709 aa12.15□□□□□ -0.46
C9orf3-211ENST00000463372 ADAM5Q6NVV9 412 aa12.15□□□□□ -0.46
C9orf3-211ENST00000463372 ZNF474Q6S9Z5 364 aaPredicted RBP12.15□□□□□ -0.46
C9orf3-211ENST00000463372 HSDL2Q6YN16 418 aa12.15□□□□□ -0.46
C9orf3-211ENST00000463372 PID1Q7Z2X4 250 aa12.15□□□□□ -0.46
C9orf3-211ENST00000463372 ABTB1Q969K4 478 aaPredicted RBP12.15□□□□□ -0.46
C9orf3-211ENST00000463372 MSI2Q96DH6 328 aaKnown RBP12.15□□□□□ -0.46
C9orf3-211ENST00000463372 BTBD6Q96KE9 485 aa12.15□□□□□ -0.46
C9orf3-211ENST00000463372 FOPNLQ96NB1 174 aa12.15□□□□□ -0.46
C9orf3-211ENST00000463372 OLFM3Q96PB7 478 aa12.15□□□□□ -0.46
C9orf3-211ENST00000463372 METRNQ9UJH8 293 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms