RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 FOXO6A8MYZ6 492 aa18.45■□□□□ 0.54
VARS-221ENST00000463184 E7ESA3 106 aa18.45■□□□□ 0.54
VARS-221ENST00000463184 CDC40O60508 579 aaKnown RBP eCLIP18.45■□□□□ 0.54
VARS-221ENST00000463184 BANF1O75531 89 aa18.45■□□□□ 0.54
VARS-221ENST00000463184 ITGA10O75578 1167 aa18.45■□□□□ 0.54
VARS-221ENST00000463184 SERPINA6P08185 405 aa18.45■□□□□ 0.54
VARS-221ENST00000463184 IGFBP2P18065 325 aa18.45■□□□□ 0.54
VARS-221ENST00000463184 RFC3P40938 356 aa18.45■□□□□ 0.54
VARS-221ENST00000463184 TRADDQ15628 312 aa18.45■□□□□ 0.54
VARS-221ENST00000463184 CMPK2Q5EBM0 449 aa18.45■□□□□ 0.54
VARS-221ENST00000463184 SPANXN3Q5MJ09 141 aa18.45■□□□□ 0.54
VARS-221ENST00000463184 ARHGAP11AQ6P4F7 1023 aa18.45■□□□□ 0.54
VARS-221ENST00000463184 NXPE4Q6UWF7 544 aa18.45■□□□□ 0.54
VARS-221ENST00000463184 CEP128Q6ZU80 1094 aa18.45■□□□□ 0.54
VARS-221ENST00000463184 CA13Q8N1Q1 262 aa18.45■□□□□ 0.54
VARS-221ENST00000463184 MARVELD2Q8N4S9 558 aa18.45■□□□□ 0.54
VARS-221ENST00000463184 GPATCH11Q8N954 259 aa18.45■□□□□ 0.54
VARS-221ENST00000463184 LILRB4Q8NHJ6 448 aa18.45■□□□□ 0.54
VARS-221ENST00000463184 PDLIM5Q96HC4 596 aaKnown RBP18.45■□□□□ 0.54
VARS-221ENST00000463184 TSNARE1Q96NA8 513 aa18.45■□□□□ 0.54
VARS-221ENST00000463184 RHBGQ9H310 441 aa18.45■□□□□ 0.54
VARS-221ENST00000463184 KLHL31Q9H511 634 aa18.45■□□□□ 0.54
VARS-221ENST00000463184 TIMMDC1Q9NPL8 285 aa18.45■□□□□ 0.54
VARS-221ENST00000463184 FBXW2Q9UKT8 454 aa18.45■□□□□ 0.54
VARS-221ENST00000463184 PPIEQ9UNP9 301 aaKnown RBP18.45■□□□□ 0.54
VARS-221ENST00000463184 VWA7Q9Y334 891 aa18.45■□□□□ 0.54
VARS-221ENST00000463184 HRH3Q9Y5N1 445 aa18.45■□□□□ 0.54
VARS-221ENST00000463184 ESYT3A0FGR9 886 aa18.44■□□□□ 0.54
VARS-221ENST00000463184 EIF3HO15372 352 aaKnown RBP eCLIP18.44■□□□□ 0.54
VARS-221ENST00000463184 MYO1DO94832 1006 aa18.44■□□□□ 0.54
VARS-221ENST00000463184 CHRNB4P30926 498 aa18.44■□□□□ 0.54
VARS-221ENST00000463184 ELK3P41970 407 aa18.44■□□□□ 0.54
VARS-221ENST00000463184 PDIA2Q13087 525 aaKnown RBP18.44■□□□□ 0.54
VARS-221ENST00000463184 RBBP5Q15291 538 aaKnown RBP18.44■□□□□ 0.54
VARS-221ENST00000463184 HECTD2Q5U5R9 776 aa18.44■□□□□ 0.54
VARS-221ENST00000463184 PAOXQ6QHF9 649 aa18.44■□□□□ 0.54
VARS-221ENST00000463184 ZDHHC24Q6UX98 284 aa18.44■□□□□ 0.54
VARS-221ENST00000463184 FBXO25Q8TCJ0 367 aa18.44■□□□□ 0.54
VARS-221ENST00000463184 RND1Q92730 232 aa18.44■□□□□ 0.54
VARS-221ENST00000463184 VMP1Q96GC9 406 aa18.44■□□□□ 0.54
VARS-221ENST00000463184 CORO1CQ9ULV4 474 aaPredicted RBP18.44■□□□□ 0.54
VARS-221ENST00000463184 YARS2Q9Y2Z4 477 aaKnown RBP18.44■□□□□ 0.54
VARS-221ENST00000463184 TEX264Q9Y6I9 313 aa18.44■□□□□ 0.54
VARS-221ENST00000463184 KCNE2Q9Y6J6 123 aa18.44■□□□□ 0.54
VARS-221ENST00000463184 SSR4P51571 173 aa18.43■□□□□ 0.54
VARS-221ENST00000463184 TOR1AIP1Q5JTV8 583 aa18.43■□□□□ 0.54
VARS-221ENST00000463184 TEDDM1Q5T9Z0 273 aa18.43■□□□□ 0.54
VARS-221ENST00000463184 FAM45BPQ6NSW5 357 aa18.43■□□□□ 0.54
VARS-221ENST00000463184 SBSNQ6UWP8 590 aa18.43■□□□□ 0.54
VARS-221ENST00000463184 MDGA2Q7Z553 956 aa18.43■□□□□ 0.54
VARS-221ENST00000463184 THOC6Q86W42 341 aaKnown RBP18.43■□□□□ 0.54
VARS-221ENST00000463184 IGDCC3Q8IVU1 814 aa18.43■□□□□ 0.54
VARS-221ENST00000463184 OR52N2Q8NGI0 321 aa18.43■□□□□ 0.54
VARS-221ENST00000463184 FAM45AQ8TCE6 357 aa18.43■□□□□ 0.54
VARS-221ENST00000463184 CREB3L4Q8TEY5 395 aa18.43■□□□□ 0.54
VARS-221ENST00000463184 CERS2Q96G23 380 aa18.43■□□□□ 0.54
VARS-221ENST00000463184 CCDC77Q9BR77 488 aa18.43■□□□□ 0.54
VARS-221ENST00000463184 PHACTR1Q9C0D0 580 aa18.43■□□□□ 0.54
VARS-221ENST00000463184 KCNJ16Q9NPI9 418 aa18.43■□□□□ 0.54
VARS-221ENST00000463184 PNO1Q9NRX1 252 aaKnown RBP18.43■□□□□ 0.54
VARS-221ENST00000463184 CHMP2BQ9UQN3 213 aa18.43■□□□□ 0.54
VARS-221ENST00000463184 RNF6Q9Y252 685 aa18.43■□□□□ 0.54
VARS-221ENST00000463184 SLC22A14Q9Y267 594 aa18.43■□□□□ 0.54
VARS-221ENST00000463184 ZFHX3Q15911 3703 aa18.42■□□□□ 0.54
VARS-221ENST00000463184 GPR143P51810 404 aa18.42■□□□□ 0.54
VARS-221ENST00000463184 HSD17B7P56937 341 aa18.42■□□□□ 0.54
VARS-221ENST00000463184 GPR85P60893 370 aa18.42■□□□□ 0.54
VARS-221ENST00000463184 STXBP1P61764 594 aaKnown RBP18.42■□□□□ 0.54
VARS-221ENST00000463184 BTN3A2P78410 334 aa18.42■□□□□ 0.54
VARS-221ENST00000463184 TFF3Q07654 80 aa18.42■□□□□ 0.54
VARS-221ENST00000463184 HP1BP3Q5SSJ5 553 aaPredicted RBP18.42■□□□□ 0.54
VARS-221ENST00000463184 TMPRSS11BQ86T26 416 aa18.42■□□□□ 0.54
VARS-221ENST00000463184 SCUBE1Q8IWY4 988 aa18.42■□□□□ 0.54
VARS-221ENST00000463184 GPALPP1Q8IXQ4 340 aa18.42■□□□□ 0.54
VARS-221ENST00000463184 FBXO36Q8NEA4 188 aa18.42■□□□□ 0.54
VARS-221ENST00000463184 NCLNQ969V3 563 aa18.42■□□□□ 0.54
VARS-221ENST00000463184 FAR2Q96K12 515 aa18.42■□□□□ 0.54
VARS-221ENST00000463184 NPLQ9BXD5 320 aaPredicted RBP18.42■□□□□ 0.54
VARS-221ENST00000463184 PPANQ9NQ55 473 aaKnown RBP18.42■□□□□ 0.54
VARS-221ENST00000463184 ZDHHC18Q9NUE0 388 aa18.42■□□□□ 0.54
VARS-221ENST00000463184 ZNF223Q9UK11 482 aaPredicted RBP18.42■□□□□ 0.54
VARS-221ENST00000463184 ERVK-11Q9UQG0 969 aa18.42■□□□□ 0.54
VARS-221ENST00000463184 C4orf51C9J302 202 aa18.41■□□□□ 0.54
VARS-221ENST00000463184 CLDN4O14493 209 aa18.41■□□□□ 0.54
VARS-221ENST00000463184 ZFAND5O76080 213 aa18.41■□□□□ 0.54
VARS-221ENST00000463184 PDE9AO76083 593 aa18.41■□□□□ 0.54
VARS-221ENST00000463184 TOXO94900 526 aa18.41■□□□□ 0.54
VARS-221ENST00000463184 CD1EP15812 388 aa18.41■□□□□ 0.54
VARS-221ENST00000463184 MSX1P28360 303 aa18.41■□□□□ 0.54
VARS-221ENST00000463184 PGGT1BP53609 377 aa18.41■□□□□ 0.54
VARS-221ENST00000463184 PPP1R3AQ16821 1122 aa18.41■□□□□ 0.54
VARS-221ENST00000463184 ACAD11Q709F0 780 aa18.41■□□□□ 0.54
VARS-221ENST00000463184 ANKMY2Q8IV38 441 aa18.41■□□□□ 0.54
VARS-221ENST00000463184 DMRTC2Q8IXT2 367 aaPredicted RBP18.41■□□□□ 0.54
VARS-221ENST00000463184 ZBED8Q8IZ13 594 aa18.41■□□□□ 0.54
VARS-221ENST00000463184 LRRN4CLQ8ND94 238 aa18.41■□□□□ 0.54
VARS-221ENST00000463184 PSD4Q8NDX1 1056 aa18.41■□□□□ 0.54
VARS-221ENST00000463184 TTLQ8NG68 377 aa18.41■□□□□ 0.54
VARS-221ENST00000463184 ANKRD7Q92527 254 aa18.41■□□□□ 0.54
VARS-221ENST00000463184 GAL3ST3Q96A11 431 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms