RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 ARF5P84085 180 aa4.65□□□□□ -1.67
COPS3-204ENST00000462236 MC1RQ01726 317 aa4.65□□□□□ -1.67
COPS3-204ENST00000462236 SLC20A2Q08357 652 aa4.65□□□□□ -1.67
COPS3-204ENST00000462236 FAM27E3Q08E93 113 aa4.65□□□□□ -1.67
COPS3-204ENST00000462236 NFATC4Q14934 902 aa4.65□□□□□ -1.67
COPS3-204ENST00000462236 IRF4Q15306 451 aa4.65□□□□□ -1.67
COPS3-204ENST00000462236 ETFDHQ16134 617 aa4.65□□□□□ -1.67
COPS3-204ENST00000462236 CCNG2Q16589 344 aa4.65□□□□□ -1.67
COPS3-204ENST00000462236 TSTQ16762 297 aaKnown RBP4.65□□□□□ -1.67
COPS3-204ENST00000462236 WSCD2Q2TBF2 565 aa4.65□□□□□ -1.67
COPS3-204ENST00000462236 EIF2S3LQ2VIR3 472 aaKnown RBP4.65□□□□□ -1.67
COPS3-204ENST00000462236 TMEM52BQ4KMG9 183 aa4.65□□□□□ -1.67
COPS3-204ENST00000462236 CBWD6Q4V339 395 aa4.65□□□□□ -1.67
COPS3-204ENST00000462236 ZNF805Q5CZA5 627 aa4.65□□□□□ -1.67
COPS3-204ENST00000462236 CARD16Q5EG05 197 aa4.65□□□□□ -1.67
COPS3-204ENST00000462236 CBWD3Q5JTY5 395 aa4.65□□□□□ -1.67
COPS3-204ENST00000462236 EFHC1Q5JVL4 640 aa4.65□□□□□ -1.67
COPS3-204ENST00000462236 OTUD1Q5VV17 481 aaPredicted RBP4.65□□□□□ -1.67
COPS3-204ENST00000462236 SPECC1LQ69YQ0 1117 aa4.65□□□□□ -1.67
COPS3-204ENST00000462236 ZNF425Q6IV72 752 aa4.65□□□□□ -1.67
COPS3-204ENST00000462236 TMEM71Q6P5X7 295 aa4.65□□□□□ -1.67
COPS3-204ENST00000462236 SLC16A12Q6ZSM3 486 aa4.65□□□□□ -1.67
COPS3-204ENST00000462236 ASB18Q6ZVZ8 466 aa4.65□□□□□ -1.67
COPS3-204ENST00000462236 MOB3CQ70IA8 216 aa4.65□□□□□ -1.67
COPS3-204ENST00000462236 ARHGAP22Q7Z5H3 698 aa4.65□□□□□ -1.67
COPS3-204ENST00000462236 TMEM110Q86TL2 294 aa4.65□□□□□ -1.67
COPS3-204ENST00000462236 VPS36Q86VN1 386 aa4.65□□□□□ -1.67
COPS3-204ENST00000462236 NRROSQ86YC3 692 aa4.65□□□□□ -1.67
COPS3-204ENST00000462236 CADM3Q8N126 398 aa4.65□□□□□ -1.67
COPS3-204ENST00000462236 IQUBQ8NA54 791 aa4.65□□□□□ -1.67
COPS3-204ENST00000462236 METTL6Q8TCB7 284 aa4.65□□□□□ -1.67
COPS3-204ENST00000462236 SNAPC3Q92966 411 aa4.65□□□□□ -1.67
COPS3-204ENST00000462236 DHX58Q96C10 678 aa4.65□□□□□ -1.67
COPS3-204ENST00000462236 PDXPQ96GD0 296 aa4.65□□□□□ -1.67
COPS3-204ENST00000462236 KLHL15Q96M94 604 aa4.65□□□□□ -1.67
COPS3-204ENST00000462236 RPRD1AQ96P16 312 aaPredicted RBP4.65□□□□□ -1.67
COPS3-204ENST00000462236 TREX2Q9BQ50 279 aaPredicted RBP4.65□□□□□ -1.67
COPS3-204ENST00000462236 APOOQ9BUR5 198 aa4.65□□□□□ -1.67
COPS3-204ENST00000462236 MVB12BQ9H7P6 319 aa4.65□□□□□ -1.67
COPS3-204ENST00000462236 GPN2Q9H9Y4 310 aaPredicted RBP4.65□□□□□ -1.67
COPS3-204ENST00000462236 RDH14Q9HBH5 336 aa4.65□□□□□ -1.67
COPS3-204ENST00000462236 POPDC2Q9HBU9 364 aa4.65□□□□□ -1.67
COPS3-204ENST00000462236 SIRT3Q9NTG7 399 aaPredicted RBP4.65□□□□□ -1.67
COPS3-204ENST00000462236 ARHGEF38Q9NXL2 777 aa4.65□□□□□ -1.67
COPS3-204ENST00000462236 ELOVL5Q9NYP7 299 aa4.65□□□□□ -1.67
COPS3-204ENST00000462236 AASSQ9UDR5 926 aa4.65□□□□□ -1.67
COPS3-204ENST00000462236 VANGL2Q9ULK5 521 aa4.65□□□□□ -1.67
COPS3-204ENST00000462236 A4GNTQ9UNA3 340 aa4.65□□□□□ -1.67
COPS3-204ENST00000462236 MRPS18BQ9Y676 258 aaKnown RBP4.65□□□□□ -1.67
COPS3-204ENST00000462236 CPAMD8Q8IZJ3 1885 aa4.64□□□□□ -1.67
COPS3-204ENST00000462236 IGHV1OR21-1A0A087WYE8 117 aa4.64□□□□□ -1.67
COPS3-204ENST00000462236 ILVBLA1L0T0 632 aa4.64□□□□□ -1.67
COPS3-204ENST00000462236 TSPAN11A1L157 253 aa4.64□□□□□ -1.67
COPS3-204ENST00000462236 M0QYV0 167 aa4.64□□□□□ -1.67
COPS3-204ENST00000462236 POLR2DO15514 142 aaKnown RBP4.64□□□□□ -1.67
COPS3-204ENST00000462236 TM7SF2O76062 418 aa4.64□□□□□ -1.67
COPS3-204ENST00000462236 SCGB1D1O95968 90 aa4.64□□□□□ -1.67
COPS3-204ENST00000462236 GSRP00390 522 aa4.64□□□□□ -1.67
COPS3-204ENST00000462236 SLC2A3P11169 496 aa4.64□□□□□ -1.67
COPS3-204ENST00000462236 CTSEP14091 401 aa4.64□□□□□ -1.67
COPS3-204ENST00000462236 GM2AP17900 193 aa4.64□□□□□ -1.67
COPS3-204ENST00000462236 TCN2P20062 427 aa4.64□□□□□ -1.67
COPS3-204ENST00000462236 CAPN3P20807 821 aa4.64□□□□□ -1.67
COPS3-204ENST00000462236 NR2F2P24468 414 aa4.64□□□□□ -1.67
COPS3-204ENST00000462236 CCR1P32246 355 aa4.64□□□□□ -1.67
COPS3-204ENST00000462236 DCTDP32321 178 aa4.64□□□□□ -1.67
COPS3-204ENST00000462236 NR4A2P43354 598 aa4.64□□□□□ -1.67
COPS3-204ENST00000462236 ACADSBP45954 432 aa4.64□□□□□ -1.67
COPS3-204ENST00000462236 MAZP56270 477 aaKnown RBP4.64□□□□□ -1.67
COPS3-204ENST00000462236 OR1D5P58170 312 aa4.64□□□□□ -1.67
COPS3-204ENST00000462236 KIAA1024LP59773 190 aa4.64□□□□□ -1.67
COPS3-204ENST00000462236 SELENOVP59797 346 aa4.64□□□□□ -1.67
COPS3-204ENST00000462236 CUL4AQ13619 759 aa4.64□□□□□ -1.67
COPS3-204ENST00000462236 PTGR1Q14914 329 aa4.64□□□□□ -1.67
COPS3-204ENST00000462236 KLHL40Q2TBA0 621 aa4.64□□□□□ -1.67
COPS3-204ENST00000462236 WASHC2DQ5SRD0 308 aa4.64□□□□□ -1.67
COPS3-204ENST00000462236 FAM180BQ6P0A1 224 aa4.64□□□□□ -1.67
COPS3-204ENST00000462236 ENPP7Q6UWV6 458 aa4.64□□□□□ -1.67
COPS3-204ENST00000462236 LINGO4Q6UY18 593 aa4.64□□□□□ -1.67
COPS3-204ENST00000462236 TRILQ7L0X0 811 aa4.64□□□□□ -1.67
COPS3-204ENST00000462236 SLC46A3Q7Z3Q1 461 aa4.64□□□□□ -1.67
COPS3-204ENST00000462236 BNIPLQ7Z465 357 aa4.64□□□□□ -1.67
COPS3-204ENST00000462236 CCL4L1Q8NHW4 92 aa4.64□□□□□ -1.67
COPS3-204ENST00000462236 LMO3Q8TAP4 145 aa4.64□□□□□ -1.67
COPS3-204ENST00000462236 OR1E3Q8WZA6 343 aa4.64□□□□□ -1.67
COPS3-204ENST00000462236 NT5C3BQ969T7 300 aa4.64□□□□□ -1.67
COPS3-204ENST00000462236 TMEM18Q96B42 140 aa4.64□□□□□ -1.67
COPS3-204ENST00000462236 FAM149B1Q96BN6 582 aa4.64□□□□□ -1.67
COPS3-204ENST00000462236 ARHGEF26Q96DR7 871 aa4.64□□□□□ -1.67
COPS3-204ENST00000462236 BARD1Q99728 777 aaKnown RBP4.64□□□□□ -1.67
COPS3-204ENST00000462236 ZPBPQ9BS86 351 aa4.64□□□□□ -1.67
COPS3-204ENST00000462236 TRIM62Q9BVG3 475 aa4.64□□□□□ -1.67
COPS3-204ENST00000462236 SPRTNQ9H040 489 aaPredicted RBP4.64□□□□□ -1.67
COPS3-204ENST00000462236 MIS12Q9H081 205 aa4.64□□□□□ -1.67
COPS3-204ENST00000462236 ISCUQ9H1K1 167 aa4.64□□□□□ -1.67
COPS3-204ENST00000462236 ZSCAN16Q9H4T2 348 aaPredicted RBP4.64□□□□□ -1.67
COPS3-204ENST00000462236 THAP9Q9H5L6 903 aa4.64□□□□□ -1.67
COPS3-204ENST00000462236 CATSPERBQ9H7T0 1116 aa4.64□□□□□ -1.67
COPS3-204ENST00000462236 FGF22Q9HCT0 170 aa4.64□□□□□ -1.67
COPS3-204ENST00000462236 KRCC1Q9NPI7 259 aaPredicted RBP4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms