RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 TMEM246Q9BRR3 403 aa17.66■□□□□ 0.42
HPS3-204ENST00000462030 ABCB8Q9NUT2 735 aa17.66■□□□□ 0.42
HPS3-204ENST00000462030 LSM2Q9Y333 95 aaKnown RBP17.66■□□□□ 0.42
HPS3-204ENST00000462030 MAP4K5Q9Y4K4 846 aa17.66■□□□□ 0.42
HPS3-204ENST00000462030 MEIOCA2RUB1 952 aa17.66■□□□□ 0.42
HPS3-204ENST00000462030 TMEM202A6NGA9 273 aa17.66■□□□□ 0.42
HPS3-204ENST00000462030 H0YIV9 168 aa17.66■□□□□ 0.42
HPS3-204ENST00000462030 GREM1O60565 184 aa17.66■□□□□ 0.42
HPS3-204ENST00000462030 CSO75390 466 aaKnown RBP17.66■□□□□ 0.42
HPS3-204ENST00000462030 ZNF8P17098 575 aaPredicted RBP17.66■□□□□ 0.42
HPS3-204ENST00000462030 TIA1P31483 386 aaKnown RBP eCLIP17.66■□□□□ 0.42
HPS3-204ENST00000462030 MAPK8P45983 427 aa17.66■□□□□ 0.42
HPS3-204ENST00000462030 PRIM2P49643 509 aa17.66■□□□□ 0.42
HPS3-204ENST00000462030 PTPN5P54829 565 aa17.66■□□□□ 0.42
HPS3-204ENST00000462030 FRMPD2BQ6IN97 320 aa17.66■□□□□ 0.42
HPS3-204ENST00000462030 SLC8B1Q6J4K2 584 aa17.66■□□□□ 0.42
HPS3-204ENST00000462030 OTOP2Q7RTS6 562 aa17.66■□□□□ 0.42
HPS3-204ENST00000462030 SLC44A2Q8IWA5 706 aaPredicted RBP17.66■□□□□ 0.42
HPS3-204ENST00000462030 OR2AP1Q8NGE2 309 aa17.66■□□□□ 0.42
HPS3-204ENST00000462030 GEMIN6Q8WXD5 167 aaKnown RBP17.66■□□□□ 0.42
HPS3-204ENST00000462030 SRRQ9GZT4 340 aa17.66■□□□□ 0.42
HPS3-204ENST00000462030 PCDHB7Q9Y5E2 793 aa17.66■□□□□ 0.42
HPS3-204ENST00000462030 PCM1Q15154 2024 aa17.65■□□□□ 0.42
HPS3-204ENST00000462030 RECKO95980 971 aa17.65■□□□□ 0.42
HPS3-204ENST00000462030 CTSOP43234 321 aaPredicted RBP17.65■□□□□ 0.42
HPS3-204ENST00000462030 CSNK1DP48730 415 aa17.65■□□□□ 0.42
HPS3-204ENST00000462030 RPS13P62277 151 aaKnown RBP17.65■□□□□ 0.42
HPS3-204ENST00000462030 CDK6Q00534 326 aa17.65■□□□□ 0.42
HPS3-204ENST00000462030 MC1RQ01726 317 aa17.65■□□□□ 0.42
HPS3-204ENST00000462030 ZNF33BQ06732 778 aa17.65■□□□□ 0.42
HPS3-204ENST00000462030 ELAVL2Q12926 359 aaKnown RBP17.65■□□□□ 0.42
HPS3-204ENST00000462030 WDR53Q7Z5U6 358 aaPredicted RBP17.65■□□□□ 0.42
HPS3-204ENST00000462030 OR7G3Q8NG95 312 aa17.65■□□□□ 0.42
HPS3-204ENST00000462030 OR52N2Q8NGI0 321 aa17.65■□□□□ 0.42
HPS3-204ENST00000462030 C1GALT1Q9NS00 363 aa17.65■□□□□ 0.42
HPS3-204ENST00000462030 PAQR5Q9NXK6 330 aaPredicted RBP17.65■□□□□ 0.42
HPS3-204ENST00000462030 CENPBD1B2RD01 187 aa17.65■□□□□ 0.42
HPS3-204ENST00000462030 AGRPO00253 132 aa17.65■□□□□ 0.42
HPS3-204ENST00000462030 IGFBP1P08833 259 aaPredicted RBP17.65■□□□□ 0.42
HPS3-204ENST00000462030 CRYBB2P43320 205 aa17.65■□□□□ 0.42
HPS3-204ENST00000462030 PSPHP78330 225 aa17.65■□□□□ 0.42
HPS3-204ENST00000462030 EEF1A2Q05639 463 aaKnown RBP17.65■□□□□ 0.42
HPS3-204ENST00000462030 LMAN2Q12907 356 aa17.65■□□□□ 0.42
HPS3-204ENST00000462030 AGTRAPQ6RW13 159 aa17.65■□□□□ 0.42
HPS3-204ENST00000462030 VN1R5Q7Z5H4 357 aa17.65■□□□□ 0.42
HPS3-204ENST00000462030 KRT73Q86Y46 540 aa17.65■□□□□ 0.42
HPS3-204ENST00000462030 LAS2Q8IYD9 372 aa17.65■□□□□ 0.42
HPS3-204ENST00000462030 HS6ST3Q8IZP7 471 aa17.65■□□□□ 0.42
HPS3-204ENST00000462030 CLP1Q92989 425 aaKnown RBP17.65■□□□□ 0.42
HPS3-204ENST00000462030 BRF2Q9HAW0 419 aa17.65■□□□□ 0.42
HPS3-204ENST00000462030 SLC25A19Q9HC21 320 aa17.65■□□□□ 0.42
HPS3-204ENST00000462030 DNAJC27Q9NZQ0 273 aa17.65■□□□□ 0.42
HPS3-204ENST00000462030 CD70P32970 193 aa17.64■□□□□ 0.42
HPS3-204ENST00000462030 HMGA2P52926 109 aa17.64■□□□□ 0.42
HPS3-204ENST00000462030 MXD1Q05195 221 aa17.64■□□□□ 0.42
HPS3-204ENST00000462030 FCHO2Q0JRZ9 810 aa17.64■□□□□ 0.42
HPS3-204ENST00000462030 CAMK2BQ13554 666 aa17.64■□□□□ 0.42
HPS3-204ENST00000462030 USP45Q70EL2 814 aa17.64■□□□□ 0.42
HPS3-204ENST00000462030 SLC34A3Q8N130 599 aa17.64■□□□□ 0.42
HPS3-204ENST00000462030 STOX2Q9P2F5 926 aaPredicted RBP17.64■□□□□ 0.42
HPS3-204ENST00000462030 RAB23Q9ULC3 237 aa17.64■□□□□ 0.42
HPS3-204ENST00000462030 ENPP4Q9Y6X5 453 aa17.64■□□□□ 0.42
HPS3-204ENST00000462030 TRBC2A0A5B9 178 aa17.64■□□□□ 0.41
HPS3-204ENST00000462030 OR2AG2A6NM03 316 aa17.64■□□□□ 0.41
HPS3-204ENST00000462030 SOX14O95416 240 aa17.64■□□□□ 0.41
HPS3-204ENST00000462030 HSD3B1P14060 373 aa17.64■□□□□ 0.41
HPS3-204ENST00000462030 HSD3B2P26439 372 aa17.64■□□□□ 0.41
HPS3-204ENST00000462030 RORCP51449 518 aa17.64■□□□□ 0.41
HPS3-204ENST00000462030 RHAGQ02094 409 aa17.64■□□□□ 0.41
HPS3-204ENST00000462030 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.64■□□□□ 0.41
HPS3-204ENST00000462030 SLC5A12Q1EHB4 618 aa17.64■□□□□ 0.41
HPS3-204ENST00000462030 MPEG1Q2M385 716 aa17.64■□□□□ 0.41
HPS3-204ENST00000462030 TRIM60Q495X7 471 aa17.64■□□□□ 0.41
HPS3-204ENST00000462030 ARL14EPQ8N8R7 260 aaPredicted RBP17.64■□□□□ 0.41
HPS3-204ENST00000462030 FAM46DQ8NEK8 389 aa17.64■□□□□ 0.41
HPS3-204ENST00000462030 BHLHE41Q9C0J9 482 aaPredicted RBP17.64■□□□□ 0.41
HPS3-204ENST00000462030 KLHL20Q9Y2M5 609 aa17.64■□□□□ 0.41
HPS3-204ENST00000462030 SGTAO43765 313 aa17.63■□□□□ 0.41
HPS3-204ENST00000462030 MPZL2O60487 215 aa17.63■□□□□ 0.41
HPS3-204ENST00000462030 CYP17A1P05093 508 aa17.63■□□□□ 0.41
HPS3-204ENST00000462030 GSTM1P09488 218 aa17.63■□□□□ 0.41
HPS3-204ENST00000462030 PIPP12273 146 aaPredicted RBP17.63■□□□□ 0.41
HPS3-204ENST00000462030 SRCP12931 536 aa17.63■□□□□ 0.41
HPS3-204ENST00000462030 BDKRB1P46663 353 aa17.63■□□□□ 0.41
HPS3-204ENST00000462030 SPINT3P49223 89 aa17.63■□□□□ 0.41
HPS3-204ENST00000462030 FLT3LGP49771 235 aa17.63■□□□□ 0.41
HPS3-204ENST00000462030 DAB2P98082 770 aa17.63■□□□□ 0.41
HPS3-204ENST00000462030 RBBP4Q09028 425 aa17.63■□□□□ 0.41
HPS3-204ENST00000462030 HYAL2Q12891 473 aa17.63■□□□□ 0.41
HPS3-204ENST00000462030 SPIN4Q56A73 249 aa17.63■□□□□ 0.41
HPS3-204ENST00000462030 SNAP47Q5SQN1 464 aa17.63■□□□□ 0.41
HPS3-204ENST00000462030 ZNF770Q6IQ21 691 aaPredicted RBP17.63■□□□□ 0.41
HPS3-204ENST00000462030 PAQR6Q6TCH4 344 aa17.63■□□□□ 0.41
HPS3-204ENST00000462030 BCDIN3DQ7Z5W3 292 aaKnown RBP17.63■□□□□ 0.41
HPS3-204ENST00000462030 TMEM150AQ86TG1 271 aa17.63■□□□□ 0.41
HPS3-204ENST00000462030 RASGRP3Q8IV61 690 aa17.63■□□□□ 0.41
HPS3-204ENST00000462030 TAGAPQ8N103 731 aa17.63■□□□□ 0.41
HPS3-204ENST00000462030 GOT1L1Q8NHS2 421 aaPredicted RBP17.63■□□□□ 0.41
HPS3-204ENST00000462030 RNF170Q96K19 258 aa17.63■□□□□ 0.41
HPS3-204ENST00000462030 FYTTD1Q96QD9 318 aaKnown RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms