RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 MST1P26927 711 aa12.85□□□□□ -0.35
SCAMP4-206ENST00000460767 HSD17B3P37058 310 aa12.85□□□□□ -0.35
SCAMP4-206ENST00000460767 PDK4Q16654 411 aa12.85□□□□□ -0.35
SCAMP4-206ENST00000460767 TSNAXIP1Q2TAA8 658 aa12.85□□□□□ -0.35
SCAMP4-206ENST00000460767 TMIGD1Q6UXZ0 262 aa12.85□□□□□ -0.35
SCAMP4-206ENST00000460767 Q6ZPB1 254 aaPredicted RBP12.85□□□□□ -0.35
SCAMP4-206ENST00000460767 RIPOR1Q6ZS17 1223 aa12.85□□□□□ -0.35
SCAMP4-206ENST00000460767 LAPTM4BQ86VI4 370 aa12.85□□□□□ -0.35
SCAMP4-206ENST00000460767 ZC3H7AQ8IWR0 971 aaKnown RBP12.85□□□□□ -0.35
SCAMP4-206ENST00000460767 KBTBD2Q8IY47 623 aa12.85□□□□□ -0.35
SCAMP4-206ENST00000460767 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.85□□□□□ -0.35
SCAMP4-206ENST00000460767 LAS2Q8IYD9 372 aa12.85□□□□□ -0.35
SCAMP4-206ENST00000460767 METTL27Q8N6F8 245 aaPredicted RBP12.85□□□□□ -0.35
SCAMP4-206ENST00000460767 ACMSDQ8TDX5 336 aa12.85□□□□□ -0.35
SCAMP4-206ENST00000460767 CAVIN3Q969G5 261 aa12.85□□□□□ -0.35
SCAMP4-206ENST00000460767 MKKSQ9NPJ1 570 aaPredicted RBP12.85□□□□□ -0.35
SCAMP4-206ENST00000460767 PSMC3IPQ9P2W1 217 aaPredicted RBP12.85□□□□□ -0.35
SCAMP4-206ENST00000460767 XPR1Q9UBH6 696 aa12.85□□□□□ -0.35
SCAMP4-206ENST00000460767 RAB21Q9UL25 225 aa12.85□□□□□ -0.35
SCAMP4-206ENST00000460767 ZNF835Q9Y2P0 537 aa12.85□□□□□ -0.35
SCAMP4-206ENST00000460767 IKBKGQ9Y6K9 419 aa12.85□□□□□ -0.35
SCAMP4-206ENST00000460767 MAU2Q9Y6X3 613 aa12.85□□□□□ -0.35
SCAMP4-206ENST00000460767 CACNA1CQ13936 2221 aa12.85□□□□□ -0.35
SCAMP4-206ENST00000460767 DCHS2Q6V1P9 2916 aa12.85□□□□□ -0.35
SCAMP4-206ENST00000460767 A0A0A6YYC8 382 aaPredicted RBP12.84□□□□□ -0.35
SCAMP4-206ENST00000460767 LRIT2A6NDA9 550 aa12.84□□□□□ -0.35
SCAMP4-206ENST00000460767 SUPT3HB4E1H0 165 aa12.84□□□□□ -0.35
SCAMP4-206ENST00000460767 STX16-NPEPL1H3BU86 382 aa12.84□□□□□ -0.35
SCAMP4-206ENST00000460767 I3L1I5 382 aaPredicted RBP12.84□□□□□ -0.35
SCAMP4-206ENST00000460767 STX16O14662 325 aa12.84□□□□□ -0.35
SCAMP4-206ENST00000460767 NDUFS4O43181 175 aa12.84□□□□□ -0.35
SCAMP4-206ENST00000460767 GALR3O60755 368 aaPredicted RBP12.84□□□□□ -0.35
SCAMP4-206ENST00000460767 SLC19A2O60779 497 aa12.84□□□□□ -0.35
SCAMP4-206ENST00000460767 SUPT3HO75486 399 aa12.84□□□□□ -0.35
SCAMP4-206ENST00000460767 CLEC3AO75596 197 aa12.84□□□□□ -0.35
SCAMP4-206ENST00000460767 BMP10O95393 424 aa12.84□□□□□ -0.35
SCAMP4-206ENST00000460767 STATHP02808 62 aa12.84□□□□□ -0.35
SCAMP4-206ENST00000460767 SERPINA7P05543 415 aa12.84□□□□□ -0.35
SCAMP4-206ENST00000460767 CYC1P08574 325 aa12.84□□□□□ -0.35
SCAMP4-206ENST00000460767 RBP1P09455 135 aa12.84□□□□□ -0.35
SCAMP4-206ENST00000460767 PRR35P0CG20 571 aa12.84□□□□□ -0.35
SCAMP4-206ENST00000460767 KIR3DL1P43629 444 aa12.84□□□□□ -0.35
SCAMP4-206ENST00000460767 KLC1Q07866 573 aa12.84□□□□□ -0.35
SCAMP4-206ENST00000460767 DOC2AQ14183 400 aa12.84□□□□□ -0.35
SCAMP4-206ENST00000460767 SLBPQ14493 270 aaKnown RBP eCLIP12.84□□□□□ -0.35
SCAMP4-206ENST00000460767 NDUFA9Q16795 377 aa12.84□□□□□ -0.35
SCAMP4-206ENST00000460767 ADNP2Q6IQ32 1131 aa12.84□□□□□ -0.35
SCAMP4-206ENST00000460767 MREGQ8N565 214 aa12.84□□□□□ -0.35
SCAMP4-206ENST00000460767 TRPV3Q8NET8 790 aa12.84□□□□□ -0.35
SCAMP4-206ENST00000460767 OR9A4Q8NGU2 314 aa12.84□□□□□ -0.35
SCAMP4-206ENST00000460767 UTP15Q8TED0 518 aaKnown RBP12.84□□□□□ -0.35
SCAMP4-206ENST00000460767 THAP3Q8WTV1 239 aaPredicted RBP12.84□□□□□ -0.35
SCAMP4-206ENST00000460767 PHF10Q8WUB8 498 aaKnown RBP12.84□□□□□ -0.35
SCAMP4-206ENST00000460767 CHTF18Q8WVB6 975 aa12.84□□□□□ -0.35
SCAMP4-206ENST00000460767 PTCD3Q96EY7 689 aaKnown RBP12.84□□□□□ -0.35
SCAMP4-206ENST00000460767 MRPL57Q9BQC6 102 aaKnown RBP12.84□□□□□ -0.35
SCAMP4-206ENST00000460767 MESP1Q9BRJ9 268 aa12.84□□□□□ -0.35
SCAMP4-206ENST00000460767 CRB3Q9BUF7 120 aa12.84□□□□□ -0.35
SCAMP4-206ENST00000460767 EFCAB11Q9BUY7 163 aa12.84□□□□□ -0.35
SCAMP4-206ENST00000460767 VPS11Q9H270 941 aa12.84□□□□□ -0.35
SCAMP4-206ENST00000460767 SOX17Q9H6I2 414 aaPredicted RBP12.84□□□□□ -0.35
SCAMP4-206ENST00000460767 CLK4Q9HAZ1 481 aaKnown RBP12.84□□□□□ -0.35
SCAMP4-206ENST00000460767 ZNF282Q9UDV7 671 aaPredicted RBP12.84□□□□□ -0.35
SCAMP4-206ENST00000460767 PCDHGB6Q9Y5F9 930 aa12.84□□□□□ -0.35
SCAMP4-206ENST00000460767 LOC102723996A0A087X1L8 192 aa12.83□□□□□ -0.36
SCAMP4-206ENST00000460767 IQANK1A0A1B0GTG1 560 aa12.83□□□□□ -0.36
SCAMP4-206ENST00000460767 LRRC14BA6NHZ5 514 aa12.83□□□□□ -0.36
SCAMP4-206ENST00000460767 PRPF4O43172 522 aaKnown RBP eCLIP12.83□□□□□ -0.36
SCAMP4-206ENST00000460767 UGDHO60701 494 aa12.83□□□□□ -0.36
SCAMP4-206ENST00000460767 DNAJB6O75190 326 aa12.83□□□□□ -0.36
SCAMP4-206ENST00000460767 RPS17P08708 135 aaKnown RBP12.83□□□□□ -0.36
SCAMP4-206ENST00000460767 COX6A1P12074 109 aa12.83□□□□□ -0.36
SCAMP4-206ENST00000460767 ALOX12P18054 663 aa12.83□□□□□ -0.36
SCAMP4-206ENST00000460767 IL1RNP18510 177 aa12.83□□□□□ -0.36
SCAMP4-206ENST00000460767 FBLP22087 321 aaKnown RBP12.83□□□□□ -0.36
SCAMP4-206ENST00000460767 CXCR2P25025 360 aa12.83□□□□□ -0.36
SCAMP4-206ENST00000460767 HNRNPH1P31943 449 aaKnown RBP12.83□□□□□ -0.36
SCAMP4-206ENST00000460767 AP2B1P63010 937 aa12.83□□□□□ -0.36
SCAMP4-206ENST00000460767 TLE4Q04727 773 aa12.83□□□□□ -0.36
SCAMP4-206ENST00000460767 HERC3Q15034 1050 aa12.83□□□□□ -0.36
SCAMP4-206ENST00000460767 PFKFB4Q16877 469 aa12.83□□□□□ -0.36
SCAMP4-206ENST00000460767 SYT16Q17RD7 645 aa12.83□□□□□ -0.36
SCAMP4-206ENST00000460767 ERCC6LQ2NKX8 1250 aa12.83□□□□□ -0.36
SCAMP4-206ENST00000460767 LGSNQ5TDP6 509 aa12.83□□□□□ -0.36
SCAMP4-206ENST00000460767 KLC3Q6P597 504 aa12.83□□□□□ -0.36
SCAMP4-206ENST00000460767 EMBQ6PCB8 327 aa12.83□□□□□ -0.36
SCAMP4-206ENST00000460767 TMEM205Q6UW68 189 aa12.83□□□□□ -0.36
SCAMP4-206ENST00000460767 CYP4X1Q8N118 509 aa12.83□□□□□ -0.36
SCAMP4-206ENST00000460767 L3MBTL4Q8NA19 623 aa12.83□□□□□ -0.36
SCAMP4-206ENST00000460767 TTLQ8NG68 377 aa12.83□□□□□ -0.36
SCAMP4-206ENST00000460767 MS4A6EQ96DS6 147 aa12.83□□□□□ -0.36
SCAMP4-206ENST00000460767 MRPL46Q9H2W6 279 aaKnown RBP12.83□□□□□ -0.36
SCAMP4-206ENST00000460767 KLHL31Q9H511 634 aa12.83□□□□□ -0.36
SCAMP4-206ENST00000460767 ZNF160Q9HCG1 818 aa12.83□□□□□ -0.36
SCAMP4-206ENST00000460767 ZBTB26Q9HCK0 441 aa12.83□□□□□ -0.36
SCAMP4-206ENST00000460767 LANCL2Q9NS86 450 aa12.83□□□□□ -0.36
SCAMP4-206ENST00000460767 C14orf105Q9NVL8 296 aa12.83□□□□□ -0.36
SCAMP4-206ENST00000460767 TMEM216Q9P0N5 145 aa12.83□□□□□ -0.36
SCAMP4-206ENST00000460767 EMCNQ9ULC0 261 aa12.83□□□□□ -0.36
SCAMP4-206ENST00000460767 TMCO1Q9UM00 188 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms