RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 ALOXE3Q9BYJ1 711 aa14.78□□□□□ -0.04
LMNB1-203ENST00000460265 ZNF556Q9HAH1 456 aa14.78□□□□□ -0.04
LMNB1-203ENST00000460265 IMPAD1Q9NX62 359 aa14.78□□□□□ -0.04
LMNB1-203ENST00000460265 BTBD3Q9Y2F9 522 aa14.78□□□□□ -0.04
LMNB1-203ENST00000460265 OR1A2Q9Y585 309 aa14.78□□□□□ -0.04
LMNB1-203ENST00000460265 SAGE2PA6NJ88 616 aa14.78□□□□□ -0.04
LMNB1-203ENST00000460265 H7BY64 318 aa14.78□□□□□ -0.04
LMNB1-203ENST00000460265 SGTAO43765 313 aa14.78□□□□□ -0.04
LMNB1-203ENST00000460265 ETHE1O95571 254 aa14.78□□□□□ -0.04
LMNB1-203ENST00000460265 NFATC1O95644 943 aa14.78□□□□□ -0.04
LMNB1-203ENST00000460265 MPC1LP0DKB6 136 aa14.78□□□□□ -0.04
LMNB1-203ENST00000460265 ETFAP13804 333 aa14.78□□□□□ -0.04
LMNB1-203ENST00000460265 IMPA1P29218 277 aa14.78□□□□□ -0.04
LMNB1-203ENST00000460265 PTGER1P34995 402 aa14.78□□□□□ -0.04
LMNB1-203ENST00000460265 PIGAP37287 484 aa14.78□□□□□ -0.04
LMNB1-203ENST00000460265 CLCNKAP51800 687 aa14.78□□□□□ -0.04
LMNB1-203ENST00000460265 RPS26P62854 115 aaKnown RBP14.78□□□□□ -0.04
LMNB1-203ENST00000460265 ELP6Q0PNE2 266 aa14.78□□□□□ -0.04
LMNB1-203ENST00000460265 NPTX1Q15818 432 aa14.78□□□□□ -0.04
LMNB1-203ENST00000460265 VMACQ2NL98 169 aa14.78□□□□□ -0.04
LMNB1-203ENST00000460265 ATG9BQ674R7 924 aa14.78□□□□□ -0.04
LMNB1-203ENST00000460265 AMZ2Q86W34 360 aa14.78□□□□□ -0.04
LMNB1-203ENST00000460265 HIPK1Q86Z02 1210 aa14.78□□□□□ -0.04
LMNB1-203ENST00000460265 LACC1Q8IV20 430 aa14.78□□□□□ -0.04
LMNB1-203ENST00000460265 MSRB3Q8IXL7 192 aa14.78□□□□□ -0.04
LMNB1-203ENST00000460265 REPS1Q96D71 796 aa14.78□□□□□ -0.04
LMNB1-203ENST00000460265 PRAP1Q96NZ9 151 aa14.78□□□□□ -0.04
LMNB1-203ENST00000460265 XKR8Q9H6D3 395 aa14.78□□□□□ -0.04
LMNB1-203ENST00000460265 RAD18Q9NS91 495 aa14.78□□□□□ -0.04
LMNB1-203ENST00000460265 DCAF13Q9NV06 445 aaKnown RBP14.78□□□□□ -0.04
LMNB1-203ENST00000460265 UCKL1Q9NWZ5 548 aa14.78□□□□□ -0.04
LMNB1-203ENST00000460265 RHCGQ9UBD6 479 aa14.78□□□□□ -0.04
LMNB1-203ENST00000460265 ABCG2Q9UNQ0 655 aa14.78□□□□□ -0.04
LMNB1-203ENST00000460265 WBP11Q9Y2W2 641 aaKnown RBP14.78□□□□□ -0.04
LMNB1-203ENST00000460265 CARNS1A5YM72 827 aa14.78□□□□□ -0.04
LMNB1-203ENST00000460265 B8ZZF3 427 aa14.78□□□□□ -0.04
LMNB1-203ENST00000460265 CCNDBP1O95273 360 aa14.78□□□□□ -0.04
LMNB1-203ENST00000460265 FADS2O95864 444 aaKnown RBP14.78□□□□□ -0.04
LMNB1-203ENST00000460265 S100A5P33763 92 aa14.78□□□□□ -0.04
LMNB1-203ENST00000460265 MANFP55145 182 aaKnown RBP14.78□□□□□ -0.04
LMNB1-203ENST00000460265 CDH12P55289 794 aa14.78□□□□□ -0.04
LMNB1-203ENST00000460265 SPIBQ01892 262 aa14.78□□□□□ -0.04
LMNB1-203ENST00000460265 SGCGQ13326 291 aa14.78□□□□□ -0.04
LMNB1-203ENST00000460265 KRR1Q13601 381 aaKnown RBP14.78□□□□□ -0.04
LMNB1-203ENST00000460265 LIPJQ5W064 366 aa14.78□□□□□ -0.04
LMNB1-203ENST00000460265 USP51Q70EK9 711 aa14.78□□□□□ -0.04
LMNB1-203ENST00000460265 C17orf64Q86WR6 236 aa14.78□□□□□ -0.04
LMNB1-203ENST00000460265 NAGSQ8N159 534 aa14.78□□□□□ -0.04
LMNB1-203ENST00000460265 OR5AR1Q8NGP9 310 aa14.78□□□□□ -0.04
LMNB1-203ENST00000460265 CIDECQ96AQ7 238 aaPredicted RBP14.78□□□□□ -0.04
LMNB1-203ENST00000460265 COQ3Q9NZJ6 369 aa14.78□□□□□ -0.04
LMNB1-203ENST00000460265 THSD7BQ9C0I4 1608 aa14.77□□□□□ -0.04
LMNB1-203ENST00000460265 FEZF1A0PJY2 475 aa14.77□□□□□ -0.04
LMNB1-203ENST00000460265 IGLON5A6NGN9 336 aa14.77□□□□□ -0.04
LMNB1-203ENST00000460265 C1QTNF3-AMACRE9PGA6 284 aa14.77□□□□□ -0.04
LMNB1-203ENST00000460265 CNTN1Q12860 1018 aa14.77□□□□□ -0.04
LMNB1-203ENST00000460265 UGT8Q16880 541 aa14.77□□□□□ -0.04
LMNB1-203ENST00000460265 PXDC1Q5TGL8 231 aa14.77□□□□□ -0.04
LMNB1-203ENST00000460265 AHSA2Q719I0 299 aa14.77□□□□□ -0.04
LMNB1-203ENST00000460265 TTC29Q8NA56 475 aaPredicted RBP14.77□□□□□ -0.04
LMNB1-203ENST00000460265 GALNT6Q8NCL4 622 aa14.77□□□□□ -0.04
LMNB1-203ENST00000460265 PMEPA1Q969W9 287 aa14.77□□□□□ -0.04
LMNB1-203ENST00000460265 SLC35A5Q9BS91 424 aa14.77□□□□□ -0.04
LMNB1-203ENST00000460265 MKRN2Q9H000 416 aaKnown RBP14.77□□□□□ -0.04
LMNB1-203ENST00000460265 KCNK6Q9Y257 313 aa14.77□□□□□ -0.04
LMNB1-203ENST00000460265 TRPM6Q9BX84 2022 aa14.77□□□□□ -0.04
LMNB1-203ENST00000460265 LINC00854A0A1B0GVQ3 168 aa14.77□□□□□ -0.05
LMNB1-203ENST00000460265 HEPACAM2A8MVW5 462 aa14.77□□□□□ -0.05
LMNB1-203ENST00000460265 GSTM1P09488 218 aa14.77□□□□□ -0.05
LMNB1-203ENST00000460265 ALPPL2P10696 532 aa14.77□□□□□ -0.05
LMNB1-203ENST00000460265 GP2P55259 537 aaKnown RBP14.77□□□□□ -0.05
LMNB1-203ENST00000460265 CD47Q08722 323 aa14.77□□□□□ -0.05
LMNB1-203ENST00000460265 ZNF181Q2M3W8 571 aa14.77□□□□□ -0.05
LMNB1-203ENST00000460265 C11orf65Q8NCR3 313 aa14.77□□□□□ -0.05
LMNB1-203ENST00000460265 SIMC1Q8NDZ2 872 aa14.77□□□□□ -0.05
LMNB1-203ENST00000460265 TOR1AIP2Q8NFQ8 470 aa14.77□□□□□ -0.05
LMNB1-203ENST00000460265 MUL1Q969V5 352 aa14.77□□□□□ -0.05
LMNB1-203ENST00000460265 LRRC3BQ96PB8 259 aa14.77□□□□□ -0.05
LMNB1-203ENST00000460265 KCNC2Q96PR1 638 aa14.77□□□□□ -0.05
LMNB1-203ENST00000460265 NTN4Q9HB63 628 aa14.77□□□□□ -0.05
LMNB1-203ENST00000460265 CTPS2Q9NRF8 586 aa14.77□□□□□ -0.05
LMNB1-203ENST00000460265 TM7SF3Q9NS93 570 aa14.77□□□□□ -0.05
LMNB1-203ENST00000460265 GLOD5A6NK44 160 aa14.76□□□□□ -0.05
LMNB1-203ENST00000460265 OR1F1O43749 312 aa14.76□□□□□ -0.05
LMNB1-203ENST00000460265 FGF19O95750 216 aa14.76□□□□□ -0.05
LMNB1-203ENST00000460265 ALPLP05186 524 aa14.76□□□□□ -0.05
LMNB1-203ENST00000460265 SLC35G4P0C7Q5 338 aa14.76□□□□□ -0.05
LMNB1-203ENST00000460265 CD22P20273 847 aa14.76□□□□□ -0.05
LMNB1-203ENST00000460265 ASMTP46597 345 aa14.76□□□□□ -0.05
LMNB1-203ENST00000460265 OR3A3P47888 321 aa14.76□□□□□ -0.05
LMNB1-203ENST00000460265 NPAS3Q8IXF0 933 aa14.76□□□□□ -0.05
LMNB1-203ENST00000460265 OR14C36Q8NHC7 312 aa14.76□□□□□ -0.05
LMNB1-203ENST00000460265 HDAC2Q92769 488 aaKnown RBP14.76□□□□□ -0.05
LMNB1-203ENST00000460265 GTPBP3Q969Y2 492 aaKnown RBP14.76□□□□□ -0.05
LMNB1-203ENST00000460265 RAD51AP1Q96B01 352 aa14.76□□□□□ -0.05
LMNB1-203ENST00000460265 AP3M1Q9Y2T2 418 aa14.76□□□□□ -0.05
LMNB1-203ENST00000460265 CCL27Q9Y4X3 112 aa14.76□□□□□ -0.05
LMNB1-203ENST00000460265 TPST2O60704 377 aa14.76□□□□□ -0.05
LMNB1-203ENST00000460265 LILRB3O75022 631 aa14.76□□□□□ -0.05
LMNB1-203ENST00000460265 PTTG1O95997 202 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms