RNA–Protein interactions for RNA: ENST00000460050.1

THBS3-204, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 879 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-204ENST00000460050 ZNF500O60304 480 aaPredicted RBP13.39□□□□□ -0.27
THBS3-204ENST00000460050 UGDHO60701 494 aa13.39□□□□□ -0.27
THBS3-204ENST00000460050 TGFB1P01137 390 aa13.39□□□□□ -0.27
THBS3-204ENST00000460050 SBK3P0C264 359 aa13.39□□□□□ -0.27
THBS3-204ENST00000460050 RAB38P57729 211 aa13.39□□□□□ -0.27
THBS3-204ENST00000460050 INPP5JQ15735 1006 aaPredicted RBP13.39□□□□□ -0.27
THBS3-204ENST00000460050 TMEM35AQ53FP2 167 aa13.39□□□□□ -0.27
THBS3-204ENST00000460050 B3GNTL1Q67FW5 361 aaPredicted RBP13.39□□□□□ -0.27
THBS3-204ENST00000460050 CHSY3Q70JA7 882 aa13.39□□□□□ -0.27
THBS3-204ENST00000460050 UBE3DQ7Z6J8 389 aa13.39□□□□□ -0.27
THBS3-204ENST00000460050 CUZD1Q86UP6 607 aa13.39□□□□□ -0.27
THBS3-204ENST00000460050 IQCKQ8N0W5 287 aa13.39□□□□□ -0.27
THBS3-204ENST00000460050 CYP4X1Q8N118 509 aa13.39□□□□□ -0.27
THBS3-204ENST00000460050 RNF175Q8N4F7 328 aa13.39□□□□□ -0.27
THBS3-204ENST00000460050 FAM47BQ8NA70 645 aa13.39□□□□□ -0.27
THBS3-204ENST00000460050 SRFBP1Q8NEF9 429 aaKnown RBP13.39□□□□□ -0.27
THBS3-204ENST00000460050 HUS1BQ8NHY5 278 aa13.39□□□□□ -0.27
THBS3-204ENST00000460050 ADAMTS18Q8TE60 1221 aa13.39□□□□□ -0.27
THBS3-204ENST00000460050 CMTM7Q96FZ5 175 aa13.39□□□□□ -0.27
THBS3-204ENST00000460050 CNDP1Q96KN2 507 aa13.39□□□□□ -0.27
THBS3-204ENST00000460050 NSUN5Q96P11 429 aaKnown RBP13.39□□□□□ -0.27
THBS3-204ENST00000460050 OR51B5Q9H339 312 aa13.39□□□□□ -0.27
THBS3-204ENST00000460050 NOL11Q9H8H0 719 aaKnown RBP13.39□□□□□ -0.27
THBS3-204ENST00000460050 NECTIN3Q9NQS3 549 aa13.39□□□□□ -0.27
THBS3-204ENST00000460050 PRDM9Q9NQV7 894 aa13.39□□□□□ -0.27
THBS3-204ENST00000460050 PRDM7Q9NQW5 492 aa13.39□□□□□ -0.27
THBS3-204ENST00000460050 TMEM216Q9P0N5 145 aa13.39□□□□□ -0.27
THBS3-204ENST00000460050 ADGRE2Q9UHX3 823 aa13.39□□□□□ -0.27
THBS3-204ENST00000460050 PCTPQ9UKL6 214 aa13.39□□□□□ -0.27
THBS3-204ENST00000460050 RNF11Q9Y3C5 154 aa13.39□□□□□ -0.27
THBS3-204ENST00000460050 MMACHCQ9Y4U1 282 aa13.39□□□□□ -0.27
THBS3-204ENST00000460050 PCDHGA11Q9Y5H2 935 aa13.39□□□□□ -0.27
THBS3-204ENST00000460050 COL12A1Q99715 3063 aa13.39□□□□□ -0.27
THBS3-204ENST00000460050 LRRK2Q5S007 2527 aa13.39□□□□□ -0.27
THBS3-204ENST00000460050 RELNP78509 3460 aa13.38□□□□□ -0.27
THBS3-204ENST00000460050 TCRBV16S1A1N1A0A5B0 115 aa13.38□□□□□ -0.27
THBS3-204ENST00000460050 DYTNA2CJ06 578 aa13.38□□□□□ -0.27
THBS3-204ENST00000460050 A8MT66 165 aa13.38□□□□□ -0.27
THBS3-204ENST00000460050 H0YIV9 168 aa13.38□□□□□ -0.27
THBS3-204ENST00000460050 GOLGA8RI6L899 631 aa13.38□□□□□ -0.27
THBS3-204ENST00000460050 ZIC2O95409 532 aaPredicted RBP13.38□□□□□ -0.27
THBS3-204ENST00000460050 SHBGP04278 402 aa13.38□□□□□ -0.27
THBS3-204ENST00000460050 ATP5A1P25705 553 aaKnown RBP13.38□□□□□ -0.27
THBS3-204ENST00000460050 ARL1P40616 181 aaPredicted RBP13.38□□□□□ -0.27
THBS3-204ENST00000460050 PIK3CBP42338 1070 aa13.38□□□□□ -0.27
THBS3-204ENST00000460050 CCNG1P51959 295 aa13.38□□□□□ -0.27
THBS3-204ENST00000460050 HNRNPFP52597 415 aaKnown RBP13.38□□□□□ -0.27
THBS3-204ENST00000460050 LIM2P55344 173 aa13.38□□□□□ -0.27
THBS3-204ENST00000460050 EXT1Q16394 746 aa13.38□□□□□ -0.27
THBS3-204ENST00000460050 CPSF6Q16630 551 aaKnown RBP eCLIP13.38□□□□□ -0.27
THBS3-204ENST00000460050 KHDRBS2Q5VWX1 349 aaKnown RBP13.38□□□□□ -0.27
THBS3-204ENST00000460050 ZNF793Q6ZN11 406 aa13.38□□□□□ -0.27
THBS3-204ENST00000460050 LCA5Q86VQ0 697 aa13.38□□□□□ -0.27
THBS3-204ENST00000460050 ATCAYQ86WG3 371 aa13.38□□□□□ -0.27
THBS3-204ENST00000460050 CNPY4Q8N129 248 aa13.38□□□□□ -0.27
THBS3-204ENST00000460050 TMEM151AQ8N4L1 468 aa13.38□□□□□ -0.27
THBS3-204ENST00000460050 L3MBTL4Q8NA19 623 aa13.38□□□□□ -0.27
THBS3-204ENST00000460050 TMEM52Q8NDY8 209 aa13.38□□□□□ -0.27
THBS3-204ENST00000460050 ARMC2Q8NEN0 867 aa13.38□□□□□ -0.27
THBS3-204ENST00000460050 OR52B6Q8NGF0 335 aa13.38□□□□□ -0.27
THBS3-204ENST00000460050 DNAJB14Q8TBM8 379 aa13.38□□□□□ -0.27
THBS3-204ENST00000460050 M1APQ8TC57 530 aa13.38□□□□□ -0.27
THBS3-204ENST00000460050 ACMSDQ8TDX5 336 aa13.38□□□□□ -0.27
THBS3-204ENST00000460050 MZB1Q8WU39 189 aa13.38□□□□□ -0.27
THBS3-204ENST00000460050 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.38□□□□□ -0.27
THBS3-204ENST00000460050 ATP6V1E2Q96A05 226 aa13.38□□□□□ -0.27
THBS3-204ENST00000460050 REPS1Q96D71 796 aa13.38□□□□□ -0.27
THBS3-204ENST00000460050 MAGEB10Q96LZ2 347 aaPredicted RBP13.38□□□□□ -0.27
THBS3-204ENST00000460050 CSF3RQ99062 836 aa13.38□□□□□ -0.27
THBS3-204ENST00000460050 MTERF1Q99551 399 aaKnown RBP13.38□□□□□ -0.27
THBS3-204ENST00000460050 TBCDQ9BTW9 1192 aa13.38□□□□□ -0.27
THBS3-204ENST00000460050 ROGDIQ9GZN7 287 aa13.38□□□□□ -0.27
THBS3-204ENST00000460050 ZBTB26Q9HCK0 441 aa13.38□□□□□ -0.27
THBS3-204ENST00000460050 PRTFDC1Q9NRG1 225 aa13.38□□□□□ -0.27
THBS3-204ENST00000460050 MAP10Q9P2G4 905 aa13.38□□□□□ -0.27
THBS3-204ENST00000460050 DAPP1Q9UN19 280 aa13.38□□□□□ -0.27
THBS3-204ENST00000460050 MRPS33Q9Y291 106 aaKnown RBP13.38□□□□□ -0.27
THBS3-204ENST00000460050 TSC22D4Q9Y3Q8 395 aa13.38□□□□□ -0.27
THBS3-204ENST00000460050 FLNBO75369 2602 aaKnown RBP13.38□□□□□ -0.27
THBS3-204ENST00000460050 ASH1LQ9NR48 2969 aaKnown RBP13.37□□□□□ -0.27
THBS3-204ENST00000460050 A8MUI8 341 aa13.37□□□□□ -0.27
THBS3-204ENST00000460050 SAP18O00422 153 aaKnown RBP13.37□□□□□ -0.27
THBS3-204ENST00000460050 CYR61O00622 381 aa13.37□□□□□ -0.27
THBS3-204ENST00000460050 SCELO95171 688 aa13.37□□□□□ -0.27
THBS3-204ENST00000460050 CLDN9O95484 217 aa13.37□□□□□ -0.27
THBS3-204ENST00000460050 RPS17P08708 135 aaKnown RBP13.37□□□□□ -0.27
THBS3-204ENST00000460050 PYGBP11216 843 aa13.37□□□□□ -0.27
THBS3-204ENST00000460050 HIST1H1TP22492 207 aaPredicted RBP13.37□□□□□ -0.27
THBS3-204ENST00000460050 SSR2P43308 183 aa13.37□□□□□ -0.27
THBS3-204ENST00000460050 RAP1GDS1P52306 607 aa13.37□□□□□ -0.27
THBS3-204ENST00000460050 SLC26A5P58743 744 aa13.37□□□□□ -0.27
THBS3-204ENST00000460050 RPS13P62277 151 aaKnown RBP13.37□□□□□ -0.27
THBS3-204ENST00000460050 VSNL1P62760 191 aa13.37□□□□□ -0.27
THBS3-204ENST00000460050 ARG2P78540 354 aa13.37□□□□□ -0.27
THBS3-204ENST00000460050 PHEXP78562 749 aa13.37□□□□□ -0.27
THBS3-204ENST00000460050 TRAF3Q13114 568 aa13.37□□□□□ -0.27
THBS3-204ENST00000460050 RCN2Q14257 317 aa13.37□□□□□ -0.27
THBS3-204ENST00000460050 ZRSR2Q15696 482 aaKnown RBP13.37□□□□□ -0.27
THBS3-204ENST00000460050 AP5B1Q2VPB7 878 aa13.37□□□□□ -0.27
THBS3-204ENST00000460050 DEPDC1Q5TB30 811 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms