RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 OR4C11Q6IEV9 310 aa15.21■□□□□ 0.03
CD28-203ENST00000458610 ANKRD37Q7Z713 158 aa15.21■□□□□ 0.03
CD28-203ENST00000458610 ZNF595Q8IYB9 648 aa15.21■□□□□ 0.03
CD28-203ENST00000458610 CYP4X1Q8N118 509 aa15.21■□□□□ 0.03
CD28-203ENST00000458610 ZADH2Q8N4Q0 377 aa15.21■□□□□ 0.03
CD28-203ENST00000458610 CCDC63Q8NA47 563 aa15.21■□□□□ 0.03
CD28-203ENST00000458610 LMF1Q96S06 567 aa15.21■□□□□ 0.03
CD28-203ENST00000458610 MTERF1Q99551 399 aaKnown RBP15.21■□□□□ 0.03
CD28-203ENST00000458610 SERPINI1Q99574 410 aa15.21■□□□□ 0.03
CD28-203ENST00000458610 AICDAQ9GZX7 198 aa15.21■□□□□ 0.03
CD28-203ENST00000458610 ELOVL6Q9H5J4 265 aa15.21■□□□□ 0.03
CD28-203ENST00000458610 ZNF552Q9H707 407 aaPredicted RBP15.21■□□□□ 0.03
CD28-203ENST00000458610 LYRM4Q9HD34 91 aa15.21■□□□□ 0.03
CD28-203ENST00000458610 DMRT3Q9NQL9 472 aa15.21■□□□□ 0.03
CD28-203ENST00000458610 PRDM7Q9NQW5 492 aa15.21■□□□□ 0.03
CD28-203ENST00000458610 NMRK1Q9NWW6 199 aa15.21■□□□□ 0.03
CD28-203ENST00000458610 MS4A12Q9NXJ0 267 aa15.21■□□□□ 0.03
CD28-203ENST00000458610 AHSPQ9NZD4 102 aa15.21■□□□□ 0.03
CD28-203ENST00000458610 PPT2Q9UMR5 302 aa15.21■□□□□ 0.03
CD28-203ENST00000458610 SNX6Q9UNH7 406 aa15.21■□□□□ 0.03
CD28-203ENST00000458610 ZFHX4Q86UP3 3567 aa15.2■□□□□ 0.02
CD28-203ENST00000458610 CFAP47Q6ZTR5 3102 aa15.2■□□□□ 0.02
CD28-203ENST00000458610 A0A0G2JN53 185 aa15.2■□□□□ 0.02
CD28-203ENST00000458610 H3BQF6 201 aa15.2■□□□□ 0.02
CD28-203ENST00000458610 SUV39H1O43463 412 aa15.2■□□□□ 0.02
CD28-203ENST00000458610 DNAJB6O75190 326 aa15.2■□□□□ 0.02
CD28-203ENST00000458610 TBX6O95947 436 aaPredicted RBP15.2■□□□□ 0.02
CD28-203ENST00000458610 UQCRHP07919 91 aa15.2■□□□□ 0.02
CD28-203ENST00000458610 ATP5A1P25705 553 aaKnown RBP15.2■□□□□ 0.02
CD28-203ENST00000458610 SSR2P43308 183 aa15.2■□□□□ 0.02
CD28-203ENST00000458610 OR4D2P58180 307 aa15.2■□□□□ 0.02
CD28-203ENST00000458610 SLC18A2Q05940 514 aa15.2■□□□□ 0.02
CD28-203ENST00000458610 RAPSNQ13702 412 aa15.2■□□□□ 0.02
CD28-203ENST00000458610 RUNX2Q13950 521 aa15.2■□□□□ 0.02
CD28-203ENST00000458610 CRB2Q5IJ48 1285 aa15.2■□□□□ 0.02
CD28-203ENST00000458610 ZNF678Q5SXM1 525 aa15.2■□□□□ 0.02
CD28-203ENST00000458610 FRG2Q64ET8 278 aa15.2■□□□□ 0.02
CD28-203ENST00000458610 ADNP2Q6IQ32 1131 aa15.2■□□□□ 0.02
CD28-203ENST00000458610 IGFL3Q6UXB1 125 aa15.2■□□□□ 0.02
CD28-203ENST00000458610 ISLR2Q6UXK2 745 aa15.2■□□□□ 0.02
CD28-203ENST00000458610 ZYG11AQ6WRX3 759 aa15.2■□□□□ 0.02
CD28-203ENST00000458610 SH2D5Q6ZV89 423 aa15.2■□□□□ 0.02
CD28-203ENST00000458610 PRICKLE2Q7Z3G6 844 aa15.2■□□□□ 0.02
CD28-203ENST00000458610 CROCCP2Q86T23 111 aa15.2■□□□□ 0.02
CD28-203ENST00000458610 ACOT4Q8N9L9 421 aa15.2■□□□□ 0.02
CD28-203ENST00000458610 OR52B6Q8NGF0 335 aa15.2■□□□□ 0.02
CD28-203ENST00000458610 OR2W6PQ8NHA6 318 aa15.2■□□□□ 0.02
CD28-203ENST00000458610 L3HYPDHQ96EM0 354 aa15.2■□□□□ 0.02
CD28-203ENST00000458610 IMMP1LQ96LU5 166 aa15.2■□□□□ 0.02
CD28-203ENST00000458610 FRG2BQ96QU4 278 aa15.2■□□□□ 0.02
CD28-203ENST00000458610 TMEM109Q9BVC6 243 aa15.2■□□□□ 0.02
CD28-203ENST00000458610 RBCK1Q9BYM8 510 aa15.2■□□□□ 0.02
CD28-203ENST00000458610 OR51B5Q9H339 312 aa15.2■□□□□ 0.02
CD28-203ENST00000458610 EPS8L2Q9H6S3 715 aa15.2■□□□□ 0.02
CD28-203ENST00000458610 ZBTB26Q9HCK0 441 aa15.2■□□□□ 0.02
CD28-203ENST00000458610 PRTFDC1Q9NRG1 225 aa15.2■□□□□ 0.02
CD28-203ENST00000458610 TEKT2Q9UIF3 430 aa15.2■□□□□ 0.02
CD28-203ENST00000458610 DAPP1Q9UN19 280 aa15.2■□□□□ 0.02
CD28-203ENST00000458610 CCDC88CQ9P219 2028 aa15.2■□□□□ 0.02
CD28-203ENST00000458610 K7EM74 188 aa15.19■□□□□ 0.02
CD28-203ENST00000458610 SLC28A2O43868 658 aa15.19■□□□□ 0.02
CD28-203ENST00000458610 ERLIN1O75477 346 aa15.19■□□□□ 0.02
CD28-203ENST00000458610 KRT6AP02538 564 aa15.19■□□□□ 0.02
CD28-203ENST00000458610 KRT6BP04259 564 aa15.19■□□□□ 0.02
CD28-203ENST00000458610 PRR35P0CG20 571 aa15.19■□□□□ 0.02
CD28-203ENST00000458610 NR1D1P20393 614 aa15.19■□□□□ 0.02
CD28-203ENST00000458610 HIST1H1TP22492 207 aaPredicted RBP15.19■□□□□ 0.02
CD28-203ENST00000458610 CERS1P27544 350 aa15.19■□□□□ 0.02
CD28-203ENST00000458610 TLX1P31314 330 aaPredicted RBP15.19■□□□□ 0.02
CD28-203ENST00000458610 CASRP41180 1078 aa15.19■□□□□ 0.02
CD28-203ENST00000458610 KRT6CP48668 564 aa15.19■□□□□ 0.02
CD28-203ENST00000458610 CDH13P55290 713 aa15.19■□□□□ 0.02
CD28-203ENST00000458610 LIM2P55344 173 aa15.19■□□□□ 0.02
CD28-203ENST00000458610 RPS13P62277 151 aaKnown RBP15.19■□□□□ 0.02
CD28-203ENST00000458610 ASPHQ12797 758 aa15.19■□□□□ 0.02
CD28-203ENST00000458610 TRAF3Q13114 568 aa15.19■□□□□ 0.02
CD28-203ENST00000458610 PCOLCEQ15113 449 aa15.19■□□□□ 0.02
CD28-203ENST00000458610 UNC50Q53HI1 259 aa15.19■□□□□ 0.02
CD28-203ENST00000458610 SFT2D3Q587I9 215 aa15.19■□□□□ 0.02
CD28-203ENST00000458610 PLAG1Q6DJT9 500 aa15.19■□□□□ 0.02
CD28-203ENST00000458610 HOMEZQ8IX15 550 aa15.19■□□□□ 0.02
CD28-203ENST00000458610 OR4F6Q8NGB9 312 aa15.19■□□□□ 0.02
CD28-203ENST00000458610 WDR20Q8TBZ3 569 aa15.19■□□□□ 0.02
CD28-203ENST00000458610 M1APQ8TC57 530 aa15.19■□□□□ 0.02
CD28-203ENST00000458610 TRPC4APQ8TEL6 797 aa15.19■□□□□ 0.02
CD28-203ENST00000458610 NSUN5Q96P11 429 aaKnown RBP15.19■□□□□ 0.02
CD28-203ENST00000458610 CDK15Q96Q40 435 aa15.19■□□□□ 0.02
CD28-203ENST00000458610 TRPS1Q9UHF7 1281 aa15.19■□□□□ 0.02
CD28-203ENST00000458610 LGALS13Q9UHV8 139 aa15.19■□□□□ 0.02
CD28-203ENST00000458610 PLAAQ9Y263 795 aa15.19■□□□□ 0.02
CD28-203ENST00000458610 COL6A6A6NMZ7 2263 aa15.18■□□□□ 0.02
CD28-203ENST00000458610 SCN3AQ9NY46 2000 aa15.18■□□□□ 0.02
CD28-203ENST00000458610 C4orf51C9J302 202 aa15.18■□□□□ 0.02
CD28-203ENST00000458610 FAM227AF5H4B4 570 aa15.18■□□□□ 0.02
CD28-203ENST00000458610 PLIN3O60664 434 aa15.18■□□□□ 0.02
CD28-203ENST00000458610 CTNSO60931 367 aa15.18■□□□□ 0.02
CD28-203ENST00000458610 SH3BGRLO75368 114 aa15.18■□□□□ 0.02
CD28-203ENST00000458610 SEC24DO94855 1032 aaPredicted RBP15.18■□□□□ 0.02
CD28-203ENST00000458610 SEMA3DO95025 777 aa15.18■□□□□ 0.02
CD28-203ENST00000458610 SCELO95171 688 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms