RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 EIF3HO15372 352 aaKnown RBP eCLIP14.73□□□□□ -0.05
CHCHD3-204ENST00000457942 RAD51CO43502 376 aa14.73□□□□□ -0.05
CHCHD3-204ENST00000457942 B3GALT2O43825 422 aa14.73□□□□□ -0.05
CHCHD3-204ENST00000457942 SLC19A2O60779 497 aa14.73□□□□□ -0.05
CHCHD3-204ENST00000457942 SLC25A12O75746 678 aa14.73□□□□□ -0.05
CHCHD3-204ENST00000457942 SP1P08047 785 aa14.73□□□□□ -0.05
CHCHD3-204ENST00000457942 ESRRAP11474 423 aaPredicted RBP14.73□□□□□ -0.05
CHCHD3-204ENST00000457942 GSTM2P28161 218 aa14.73□□□□□ -0.05
CHCHD3-204ENST00000457942 HPDP32754 393 aaPredicted RBP14.73□□□□□ -0.05
CHCHD3-204ENST00000457942 GP5P40197 560 aa14.73□□□□□ -0.05
CHCHD3-204ENST00000457942 CA7P43166 264 aa14.73□□□□□ -0.05
CHCHD3-204ENST00000457942 HSPA7P48741 367 aa14.73□□□□□ -0.05
CHCHD3-204ENST00000457942 CYB561P49447 251 aa14.73□□□□□ -0.05
CHCHD3-204ENST00000457942 PLA2G16P53816 162 aa14.73□□□□□ -0.05
CHCHD3-204ENST00000457942 ATP6V0D1P61421 351 aa14.73□□□□□ -0.05
CHCHD3-204ENST00000457942 SLC13A2Q13183 592 aa14.73□□□□□ -0.05
CHCHD3-204ENST00000457942 SLMAPQ14BN4 828 aa14.73□□□□□ -0.05
CHCHD3-204ENST00000457942 CDSNQ15517 529 aa14.73□□□□□ -0.05
CHCHD3-204ENST00000457942 TESK1Q15569 626 aa14.73□□□□□ -0.05
CHCHD3-204ENST00000457942 XKR6Q5GH73 641 aa14.73□□□□□ -0.05
CHCHD3-204ENST00000457942 TRIM40Q6P9F5 258 aa14.73□□□□□ -0.05
CHCHD3-204ENST00000457942 NCCRP1Q6ZVX7 275 aaPredicted RBP14.73□□□□□ -0.05
CHCHD3-204ENST00000457942 RAPH1Q70E73 1250 aa14.73□□□□□ -0.05
CHCHD3-204ENST00000457942 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.73□□□□□ -0.05
CHCHD3-204ENST00000457942 KLHDC8AQ8IYD2 350 aa14.73□□□□□ -0.05
CHCHD3-204ENST00000457942 FAM47BQ8NA70 645 aa14.73□□□□□ -0.05
CHCHD3-204ENST00000457942 SPATA4Q8NEY3 305 aa14.73□□□□□ -0.05
CHCHD3-204ENST00000457942 THAP3Q8WTV1 239 aaPredicted RBP14.73□□□□□ -0.05
CHCHD3-204ENST00000457942 GPR137Q96N19 417 aa14.73□□□□□ -0.05
CHCHD3-204ENST00000457942 TMEM79Q9BSE2 394 aa14.73□□□□□ -0.05
CHCHD3-204ENST00000457942 PRTFDC1Q9NRG1 225 aa14.73□□□□□ -0.05
CHCHD3-204ENST00000457942 GPRC5BQ9NZH0 403 aa14.73□□□□□ -0.05
CHCHD3-204ENST00000457942 FBXW2Q9UKT8 454 aa14.73□□□□□ -0.05
CHCHD3-204ENST00000457942 RNF112Q9ULX5 631 aa14.73□□□□□ -0.05
CHCHD3-204ENST00000457942 NPIPA1Q9UND3 350 aa14.73□□□□□ -0.05
CHCHD3-204ENST00000457942 MRPS33Q9Y291 106 aaKnown RBP14.73□□□□□ -0.05
CHCHD3-204ENST00000457942 UTP11Q9Y3A2 253 aaKnown RBP14.73□□□□□ -0.05
CHCHD3-204ENST00000457942 MMACHCQ9Y4U1 282 aa14.73□□□□□ -0.05
CHCHD3-204ENST00000457942 CLDN4O14493 209 aa14.72□□□□□ -0.05
CHCHD3-204ENST00000457942 CCNT2O60583 730 aaKnown RBP14.72□□□□□ -0.05
CHCHD3-204ENST00000457942 STK16O75716 305 aa14.72□□□□□ -0.05
CHCHD3-204ENST00000457942 NEURL1O76050 574 aa14.72□□□□□ -0.05
CHCHD3-204ENST00000457942 SMIM10L1P0DMW3 83 aa14.72□□□□□ -0.05
CHCHD3-204ENST00000457942 CD1DP15813 335 aa14.72□□□□□ -0.05
CHCHD3-204ENST00000457942 ZNF24P17028 368 aa14.72□□□□□ -0.05
CHCHD3-204ENST00000457942 HNRNPH1P31943 449 aaKnown RBP14.72□□□□□ -0.05
CHCHD3-204ENST00000457942 CLCN2P51788 898 aa14.72□□□□□ -0.05
CHCHD3-204ENST00000457942 RAB38P57729 211 aa14.72□□□□□ -0.05
CHCHD3-204ENST00000457942 ADORA2A-AS1P86434 159 aa14.72□□□□□ -0.05
CHCHD3-204ENST00000457942 PDK4Q16654 411 aa14.72□□□□□ -0.05
CHCHD3-204ENST00000457942 ZNF468Q5VIY5 522 aaPredicted RBP14.72□□□□□ -0.05
CHCHD3-204ENST00000457942 SULT1C3Q6IMI6 304 aa14.72□□□□□ -0.05
CHCHD3-204ENST00000457942 RPTNQ6XPR3 784 aa14.72□□□□□ -0.05
CHCHD3-204ENST00000457942 C3orf62Q6ZUJ4 267 aa14.72□□□□□ -0.05
CHCHD3-204ENST00000457942 B3GNT7Q8NFL0 401 aa14.72□□□□□ -0.05
CHCHD3-204ENST00000457942 ADAMTS18Q8TE60 1221 aa14.72□□□□□ -0.05
CHCHD3-204ENST00000457942 ESAMQ96AP7 390 aa14.72□□□□□ -0.05
CHCHD3-204ENST00000457942 MS4A6EQ96DS6 147 aa14.72□□□□□ -0.05
CHCHD3-204ENST00000457942 SMIM10Q96HG1 83 aa14.72□□□□□ -0.05
CHCHD3-204ENST00000457942 FRMD6Q96NE9 622 aa14.72□□□□□ -0.05
CHCHD3-204ENST00000457942 GPR22Q99680 433 aa14.72□□□□□ -0.05
CHCHD3-204ENST00000457942 REXO4Q9GZR2 422 aaKnown RBP14.72□□□□□ -0.05
CHCHD3-204ENST00000457942 AICDAQ9GZX7 198 aa14.72□□□□□ -0.05
CHCHD3-204ENST00000457942 TINAGQ9UJW2 476 aa14.72□□□□□ -0.05
CHCHD3-204ENST00000457942 IGKV3D-11A0A0A0MRZ8 115 aa14.71□□□□□ -0.05
CHCHD3-204ENST00000457942 ASPDHA6ND91 283 aa14.71□□□□□ -0.05
CHCHD3-204ENST00000457942 LRIT2A6NDA9 550 aa14.71□□□□□ -0.05
CHCHD3-204ENST00000457942 TAPBPO15533 448 aa14.71□□□□□ -0.05
CHCHD3-204ENST00000457942 NME2P1O60361 137 aa14.71□□□□□ -0.05
CHCHD3-204ENST00000457942 CLEC3AO75596 197 aa14.71□□□□□ -0.05
CHCHD3-204ENST00000457942 ABOP16442 354 aa14.71□□□□□ -0.05
CHCHD3-204ENST00000457942 NME2P22392 152 aa14.71□□□□□ -0.05
CHCHD3-204ENST00000457942 CERS1P27544 350 aa14.71□□□□□ -0.05
CHCHD3-204ENST00000457942 SSTR2P30874 369 aa14.71□□□□□ -0.05
CHCHD3-204ENST00000457942 SPRP35270 261 aaPredicted RBP14.71□□□□□ -0.05
CHCHD3-204ENST00000457942 PLTPP55058 493 aa14.71□□□□□ -0.05
CHCHD3-204ENST00000457942 MLF1P58340 268 aa14.71□□□□□ -0.05
CHCHD3-204ENST00000457942 RAB10P61026 200 aa14.71□□□□□ -0.05
CHCHD3-204ENST00000457942 ETF1P62495 437 aaKnown RBP14.71□□□□□ -0.05
CHCHD3-204ENST00000457942 TGM3Q08188 693 aa14.71□□□□□ -0.05
CHCHD3-204ENST00000457942 RCN2Q14257 317 aa14.71□□□□□ -0.05
CHCHD3-204ENST00000457942 OR4D1Q15615 310 aa14.71□□□□□ -0.05
CHCHD3-204ENST00000457942 C3AR1Q16581 482 aa14.71□□□□□ -0.05
CHCHD3-204ENST00000457942 HIST2H2ACQ16777 129 aaPredicted RBP14.71□□□□□ -0.05
CHCHD3-204ENST00000457942 KRTCAP3Q53RY4 240 aa14.71□□□□□ -0.05
CHCHD3-204ENST00000457942 PAGE2BQ5JRK9 111 aa14.71□□□□□ -0.05
CHCHD3-204ENST00000457942 HIST2H2AA3Q6FI13 130 aa14.71□□□□□ -0.05
CHCHD3-204ENST00000457942 CLNKQ7Z7G1 428 aa14.71□□□□□ -0.05
CHCHD3-204ENST00000457942 TMEM156Q8N614 296 aa14.71□□□□□ -0.05
CHCHD3-204ENST00000457942 PPM1NQ8N819 430 aa14.71□□□□□ -0.05
CHCHD3-204ENST00000457942 OR2L5Q8NG80 312 aa14.71□□□□□ -0.05
CHCHD3-204ENST00000457942 PTCD3Q96EY7 689 aaKnown RBP14.71□□□□□ -0.05
CHCHD3-204ENST00000457942 SEC16BQ96JE7 1060 aa14.71□□□□□ -0.05
CHCHD3-204ENST00000457942 CCDC77Q9BR77 488 aa14.71□□□□□ -0.05
CHCHD3-204ENST00000457942 MCMBPQ9BTE3 642 aa14.71□□□□□ -0.05
CHCHD3-204ENST00000457942 NPLQ9BXD5 320 aaPredicted RBP14.71□□□□□ -0.05
CHCHD3-204ENST00000457942 PITHD1Q9GZP4 211 aaPredicted RBP14.71□□□□□ -0.05
CHCHD3-204ENST00000457942 RAB17Q9H0T7 212 aa14.71□□□□□ -0.05
CHCHD3-204ENST00000457942 FAM159BA6NKW6 160 aa14.7□□□□□ -0.06
CHCHD3-204ENST00000457942 SUPT3HB4E1H0 165 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms