RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 PLEKHS1Q5SXH7 462 aa11.9□□□□□ -0.5
LINC00959-201ENST00000456581 IER5LQ5T953 404 aa11.9□□□□□ -0.5
LINC00959-201ENST00000456581 FRG2Q64ET8 278 aa11.9□□□□□ -0.5
LINC00959-201ENST00000456581 RAET1GQ6H3X3 334 aa11.9□□□□□ -0.5
LINC00959-201ENST00000456581 ERAP2Q6P179 960 aa11.9□□□□□ -0.5
LINC00959-201ENST00000456581 GDPD3Q7L5L3 318 aa11.9□□□□□ -0.5
LINC00959-201ENST00000456581 PRSS48Q7RTY5 328 aa11.9□□□□□ -0.5
LINC00959-201ENST00000456581 TRAPPC5Q8IUR0 188 aa11.9□□□□□ -0.5
LINC00959-201ENST00000456581 P3H2Q8IVL5 708 aa11.9□□□□□ -0.5
LINC00959-201ENST00000456581 ZNF557Q8N988 423 aaPredicted RBP11.9□□□□□ -0.5
LINC00959-201ENST00000456581 OR5AK3PQ8NH89 298 aa11.9□□□□□ -0.5
LINC00959-201ENST00000456581 GGHQ92820 318 aa11.9□□□□□ -0.5
LINC00959-201ENST00000456581 NEDD4LQ96PU5 975 aa11.9□□□□□ -0.5
LINC00959-201ENST00000456581 FRG2BQ96QU4 278 aa11.9□□□□□ -0.5
LINC00959-201ENST00000456581 OR4K3Q96R72 315 aa11.9□□□□□ -0.5
LINC00959-201ENST00000456581 ITPAQ9BY32 194 aa11.9□□□□□ -0.5
LINC00959-201ENST00000456581 GABARAPL1Q9H0R8 117 aa11.9□□□□□ -0.5
LINC00959-201ENST00000456581 SLC27A6Q9Y2P4 619 aa11.9□□□□□ -0.5
LINC00959-201ENST00000456581 UPK1BO75841 260 aa11.89□□□□□ -0.51
LINC00959-201ENST00000456581 SLCO2B1O94956 709 aa11.89□□□□□ -0.51
LINC00959-201ENST00000456581 CHRM5P08912 532 aaPredicted RBP11.89□□□□□ -0.51
LINC00959-201ENST00000456581 C6P13671 934 aa11.89□□□□□ -0.51
LINC00959-201ENST00000456581 CYP2A7P20853 494 aa11.89□□□□□ -0.51
LINC00959-201ENST00000456581 FCARP24071 287 aa11.89□□□□□ -0.51
LINC00959-201ENST00000456581 SERPINB1P30740 379 aa11.89□□□□□ -0.51
LINC00959-201ENST00000456581 SOX9P48436 509 aa11.89□□□□□ -0.51
LINC00959-201ENST00000456581 ZNF404Q494X3 552 aa11.89□□□□□ -0.51
LINC00959-201ENST00000456581 ZMAT1Q5H9K5 638 aa11.89□□□□□ -0.51
LINC00959-201ENST00000456581 VITQ6UXI7 678 aa11.89□□□□□ -0.51
LINC00959-201ENST00000456581 RTL10Q7L3V2 364 aa11.89□□□□□ -0.51
LINC00959-201ENST00000456581 TSPYL5Q86VY4 417 aaPredicted RBP11.89□□□□□ -0.51
LINC00959-201ENST00000456581 PLA2G15Q8NCC3 412 aa11.89□□□□□ -0.51
LINC00959-201ENST00000456581 GTPBP3Q969Y2 492 aaKnown RBP11.89□□□□□ -0.51
LINC00959-201ENST00000456581 TMEM159Q96B96 161 aa11.89□□□□□ -0.51
LINC00959-201ENST00000456581 DTD2Q96FN9 168 aa11.89□□□□□ -0.51
LINC00959-201ENST00000456581 C7orf34Q96L11 122 aa11.89□□□□□ -0.51
LINC00959-201ENST00000456581 KCNS3Q9BQ31 491 aa11.89□□□□□ -0.51
LINC00959-201ENST00000456581 KXD1Q9BQD3 176 aa11.89□□□□□ -0.51
LINC00959-201ENST00000456581 TPK1Q9H3S4 243 aa11.89□□□□□ -0.51
LINC00959-201ENST00000456581 DKK3Q9UBP4 350 aa11.89□□□□□ -0.51
LINC00959-201ENST00000456581 TMEM98Q9Y2Y6 226 aa11.89□□□□□ -0.51
LINC00959-201ENST00000456581 NUP210Q8TEM1 1887 aaPredicted RBP11.89□□□□□ -0.51
LINC00959-201ENST00000456581 SNPHO15079 494 aa11.89□□□□□ -0.51
LINC00959-201ENST00000456581 LRRTM2O43300 516 aa11.89□□□□□ -0.51
LINC00959-201ENST00000456581 EPHX1P07099 455 aa11.89□□□□□ -0.51
LINC00959-201ENST00000456581 ETFAP13804 333 aa11.89□□□□□ -0.51
LINC00959-201ENST00000456581 PPP5CP53041 499 aa11.89□□□□□ -0.51
LINC00959-201ENST00000456581 CDH12P55289 794 aa11.89□□□□□ -0.51
LINC00959-201ENST00000456581 ERVK-21P61565 698 aa11.89□□□□□ -0.51
LINC00959-201ENST00000456581 DEPDC1Q5TB30 811 aa11.89□□□□□ -0.51
LINC00959-201ENST00000456581 WDR53Q7Z5U6 358 aaPredicted RBP11.89□□□□□ -0.51
LINC00959-201ENST00000456581 SERPINA11Q86U17 422 aa11.89□□□□□ -0.51
LINC00959-201ENST00000456581 GATAD2AQ86YP4 633 aa11.89□□□□□ -0.51
LINC00959-201ENST00000456581 CFAP206Q8IYR0 622 aa11.89□□□□□ -0.51
LINC00959-201ENST00000456581 METTL4Q8N3J2 472 aa11.89□□□□□ -0.51
LINC00959-201ENST00000456581 C2orf73Q8N5S3 287 aaPredicted RBP11.89□□□□□ -0.51
LINC00959-201ENST00000456581 PARP16Q8N5Y8 322 aa11.89□□□□□ -0.51
LINC00959-201ENST00000456581 SCAIQ8N9R8 606 aa11.89□□□□□ -0.51
LINC00959-201ENST00000456581 DMRTB1Q96MA1 342 aa11.89□□□□□ -0.51
LINC00959-201ENST00000456581 COQ10AQ96MF6 247 aa11.89□□□□□ -0.51
LINC00959-201ENST00000456581 OR5M11Q96RB7 305 aa11.89□□□□□ -0.51
LINC00959-201ENST00000456581 MTIF3Q9H2K0 278 aaKnown RBP11.89□□□□□ -0.51
LINC00959-201ENST00000456581 TRIM39Q9HCM9 518 aa11.89□□□□□ -0.51
LINC00959-201ENST00000456581 SMIM30A4D0T7 59 aa11.88□□□□□ -0.51
LINC00959-201ENST00000456581 GABRR3A8MPY1 467 aa11.88□□□□□ -0.51
LINC00959-201ENST00000456581 NFATC1O95644 943 aa11.88□□□□□ -0.51
LINC00959-201ENST00000456581 ADRB3P13945 408 aa11.88□□□□□ -0.51
LINC00959-201ENST00000456581 OPRD1P41143 372 aa11.88□□□□□ -0.51
LINC00959-201ENST00000456581 COPZ1P61923 177 aa11.88□□□□□ -0.51
LINC00959-201ENST00000456581 DUSP6Q16828 381 aa11.88□□□□□ -0.51
LINC00959-201ENST00000456581 PROX2Q3B8N5 592 aa11.88□□□□□ -0.51
LINC00959-201ENST00000456581 XKR6Q5GH73 641 aa11.88□□□□□ -0.51
LINC00959-201ENST00000456581 NEK10Q6ZWH5 1172 aa11.88□□□□□ -0.51
LINC00959-201ENST00000456581 CBLL1Q75N03 491 aa11.88□□□□□ -0.51
LINC00959-201ENST00000456581 VASH1Q7L8A9 365 aaPredicted RBP11.88□□□□□ -0.51
LINC00959-201ENST00000456581 SLC38A4Q969I6 547 aa11.88□□□□□ -0.51
LINC00959-201ENST00000456581 TESCQ96BS2 214 aa11.88□□□□□ -0.51
LINC00959-201ENST00000456581 ITPKCQ96DU7 683 aa11.88□□□□□ -0.51
LINC00959-201ENST00000456581 CMTM7Q96FZ5 175 aa11.88□□□□□ -0.51
LINC00959-201ENST00000456581 SIGLEC11Q96RL6 698 aa11.88□□□□□ -0.51
LINC00959-201ENST00000456581 HOXD1Q9GZZ0 328 aa11.88□□□□□ -0.51
LINC00959-201ENST00000456581 NKX2-4Q9H2Z4 354 aa11.88□□□□□ -0.51
LINC00959-201ENST00000456581 DNAJC11Q9NVH1 559 aa11.88□□□□□ -0.51
LINC00959-201ENST00000456581 ASIC5Q9NY37 505 aa11.88□□□□□ -0.51
LINC00959-201ENST00000456581 SH3BP4Q9P0V3 963 aa11.88□□□□□ -0.51
LINC00959-201ENST00000456581 KLHL42Q9P2K6 505 aa11.88□□□□□ -0.51
LINC00959-201ENST00000456581 SH2B3Q9UQQ2 575 aa11.88□□□□□ -0.51
LINC00959-201ENST00000456581 METTL15A6NJ78 407 aa11.88□□□□□ -0.51
LINC00959-201ENST00000456581 NDUFB5O43674 189 aa11.88□□□□□ -0.51
LINC00959-201ENST00000456581 LZTS3O60299 673 aaPredicted RBP11.88□□□□□ -0.51
LINC00959-201ENST00000456581 PRNPP04156 253 aa11.88□□□□□ -0.51
LINC00959-201ENST00000456581 MPC1LP0DKB6 136 aa11.88□□□□□ -0.51
LINC00959-201ENST00000456581 CRATP43155 626 aa11.88□□□□□ -0.51
LINC00959-201ENST00000456581 MC1RQ01726 317 aa11.88□□□□□ -0.51
LINC00959-201ENST00000456581 IRF8Q02556 426 aa11.88□□□□□ -0.51
LINC00959-201ENST00000456581 DMPKQ09013 629 aa11.88□□□□□ -0.51
LINC00959-201ENST00000456581 COL9A2Q14055 689 aaPredicted RBP11.88□□□□□ -0.51
LINC00959-201ENST00000456581 TPRG1LQ5T0D9 272 aa11.88□□□□□ -0.51
LINC00959-201ENST00000456581 FAHD1Q6P587 224 aa11.88□□□□□ -0.51
LINC00959-201ENST00000456581 CCBE1Q6UXH8 406 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms