RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 RAB8AP61006 207 aa12.14□□□□□ -0.47
TREX1-203ENST00000456089 ACTN3Q08043 901 aaPredicted RBP12.14□□□□□ -0.47
TREX1-203ENST00000456089 TGM3Q08188 693 aa12.14□□□□□ -0.47
TREX1-203ENST00000456089 DLG1Q12959 904 aa12.14□□□□□ -0.47
TREX1-203ENST00000456089 TUBA3CQ13748 450 aa12.14□□□□□ -0.47
TREX1-203ENST00000456089 NSDHLQ15738 373 aa12.14□□□□□ -0.47
TREX1-203ENST00000456089 TOR1AIP1Q5JTV8 583 aa12.14□□□□□ -0.47
TREX1-203ENST00000456089 SP5Q6BEB4 398 aaPredicted RBP12.14□□□□□ -0.47
TREX1-203ENST00000456089 SPINK14Q6IE38 97 aa12.14□□□□□ -0.47
TREX1-203ENST00000456089 TUBA3EQ6PEY2 450 aa12.14□□□□□ -0.47
TREX1-203ENST00000456089 TRMT10CQ7L0Y3 403 aaKnown RBP12.14□□□□□ -0.47
TREX1-203ENST00000456089 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.14□□□□□ -0.47
TREX1-203ENST00000456089 KIF2BQ8N4N8 673 aa12.14□□□□□ -0.47
TREX1-203ENST00000456089 ANKRD53Q8N9V6 530 aa12.14□□□□□ -0.47
TREX1-203ENST00000456089 RHEBL1Q8TAI7 183 aa12.14□□□□□ -0.47
TREX1-203ENST00000456089 UBE2E3Q969T4 207 aa12.14□□□□□ -0.47
TREX1-203ENST00000456089 PTCD3Q96EY7 689 aaKnown RBP12.14□□□□□ -0.47
TREX1-203ENST00000456089 CCDC120Q96HB5 630 aa12.14□□□□□ -0.47
TREX1-203ENST00000456089 SEC16BQ96JE7 1060 aa12.14□□□□□ -0.47
TREX1-203ENST00000456089 SCYL1Q96KG9 808 aa12.14□□□□□ -0.47
TREX1-203ENST00000456089 EFCAB11Q9BUY7 163 aa12.14□□□□□ -0.47
TREX1-203ENST00000456089 FUT8Q9BYC5 575 aa12.14□□□□□ -0.47
TREX1-203ENST00000456089 RNF32Q9H0A6 362 aa12.14□□□□□ -0.47
TREX1-203ENST00000456089 EHD1Q9H4M9 534 aa12.14□□□□□ -0.47
TREX1-203ENST00000456089 ABI3Q9P2A4 366 aa12.14□□□□□ -0.47
TREX1-203ENST00000456089 COPG2Q9UBF2 871 aa12.14□□□□□ -0.47
TREX1-203ENST00000456089 K7EPI3 171 aa12.13□□□□□ -0.47
TREX1-203ENST00000456089 CCL21O00585 134 aa12.13□□□□□ -0.47
TREX1-203ENST00000456089 CHST10O43529 356 aa12.13□□□□□ -0.47
TREX1-203ENST00000456089 ALDOAP04075 364 aaKnown RBP12.13□□□□□ -0.47
TREX1-203ENST00000456089 RBP1P09455 135 aa12.13□□□□□ -0.47
TREX1-203ENST00000456089 EPB42P16452 691 aa12.13□□□□□ -0.47
TREX1-203ENST00000456089 ECHS1P30084 290 aa12.13□□□□□ -0.47
TREX1-203ENST00000456089 CD96P40200 585 aa12.13□□□□□ -0.47
TREX1-203ENST00000456089 AGTR2P50052 363 aa12.13□□□□□ -0.47
TREX1-203ENST00000456089 OR4D2P58180 307 aa12.13□□□□□ -0.47
TREX1-203ENST00000456089 BTG2P78543 158 aa12.13□□□□□ -0.47
TREX1-203ENST00000456089 IRF9Q00978 393 aa12.13□□□□□ -0.47
TREX1-203ENST00000456089 CHIT1Q13231 466 aa12.13□□□□□ -0.47
TREX1-203ENST00000456089 INAQ16352 499 aa12.13□□□□□ -0.47
TREX1-203ENST00000456089 PFKFB4Q16877 469 aa12.13□□□□□ -0.47
TREX1-203ENST00000456089 ZNF468Q5VIY5 522 aaPredicted RBP12.13□□□□□ -0.47
TREX1-203ENST00000456089 H3F3CQ6NXT2 135 aa12.13□□□□□ -0.47
TREX1-203ENST00000456089 CENPLQ8N0S6 344 aaPredicted RBP12.13□□□□□ -0.47
TREX1-203ENST00000456089 CYP4X1Q8N118 509 aa12.13□□□□□ -0.47
TREX1-203ENST00000456089 AFAP1L2Q8N4X5 818 aa12.13□□□□□ -0.47
TREX1-203ENST00000456089 UTP15Q8TED0 518 aaKnown RBP12.13□□□□□ -0.47
TREX1-203ENST00000456089 ITLN2Q8WWU7 325 aaPredicted RBP12.13□□□□□ -0.47
TREX1-203ENST00000456089 RELTQ969Z4 430 aa12.13□□□□□ -0.47
TREX1-203ENST00000456089 TBC1D20Q96BZ9 403 aa12.13□□□□□ -0.47
TREX1-203ENST00000456089 ZNF354BQ96LW1 612 aa12.13□□□□□ -0.47
TREX1-203ENST00000456089 OR1F2PQ96R84 312 aa12.13□□□□□ -0.47
TREX1-203ENST00000456089 ATOH8Q96SQ7 321 aa12.13□□□□□ -0.47
TREX1-203ENST00000456089 CCDC77Q9BR77 488 aa12.13□□□□□ -0.47
TREX1-203ENST00000456089 SLC6A16Q9GZN6 736 aa12.13□□□□□ -0.47
TREX1-203ENST00000456089 RHBGQ9H310 441 aa12.13□□□□□ -0.47
TREX1-203ENST00000456089 KLHL31Q9H511 634 aa12.13□□□□□ -0.47
TREX1-203ENST00000456089 NT5DC2Q9H857 520 aa12.13□□□□□ -0.47
TREX1-203ENST00000456089 CLK4Q9HAZ1 481 aaKnown RBP12.13□□□□□ -0.47
TREX1-203ENST00000456089 CPSF2Q9P2I0 782 aaKnown RBP12.13□□□□□ -0.47
TREX1-203ENST00000456089 TEKT2Q9UIF3 430 aa12.13□□□□□ -0.47
TREX1-203ENST00000456089 APCP25054 2843 aa12.13□□□□□ -0.47
TREX1-203ENST00000456089 CACNA1CQ13936 2221 aa12.13□□□□□ -0.47
TREX1-203ENST00000456089 ABCA12Q86UK0 2595 aa12.12□□□□□ -0.47
TREX1-203ENST00000456089 HMX2A2RU54 273 aa12.12□□□□□ -0.47
TREX1-203ENST00000456089 GABRR3A8MPY1 467 aa12.12□□□□□ -0.47
TREX1-203ENST00000456089 A8MUA0 341 aa12.12□□□□□ -0.47
TREX1-203ENST00000456089 C4orf51C9J302 202 aa12.12□□□□□ -0.47
TREX1-203ENST00000456089 CLEC3AO75596 197 aa12.12□□□□□ -0.47
TREX1-203ENST00000456089 CRYABP02511 175 aaKnown RBP12.12□□□□□ -0.47
TREX1-203ENST00000456089 FHP07954 510 aa12.12□□□□□ -0.47
TREX1-203ENST00000456089 SNRPB2P08579 225 aaKnown RBP12.12□□□□□ -0.47
TREX1-203ENST00000456089 SNRPAP09012 282 aaKnown RBP12.12□□□□□ -0.47
TREX1-203ENST00000456089 PCNAP12004 261 aa12.12□□□□□ -0.47
TREX1-203ENST00000456089 ARL1P40616 181 aaPredicted RBP12.12□□□□□ -0.47
TREX1-203ENST00000456089 KCNC1P48547 511 aa12.12□□□□□ -0.47
TREX1-203ENST00000456089 ALDH18A1P54886 795 aaKnown RBP12.12□□□□□ -0.47
TREX1-203ENST00000456089 SLC26A5P58743 744 aa12.12□□□□□ -0.47
TREX1-203ENST00000456089 BTN3A2P78410 334 aa12.12□□□□□ -0.47
TREX1-203ENST00000456089 DOC2AQ14183 400 aa12.12□□□□□ -0.47
TREX1-203ENST00000456089 OR1C1Q15619 314 aa12.12□□□□□ -0.47
TREX1-203ENST00000456089 TSNAXIP1Q2TAA8 658 aa12.12□□□□□ -0.47
TREX1-203ENST00000456089 TEX35Q5T0J7 233 aa12.12□□□□□ -0.47
TREX1-203ENST00000456089 UBAP2Q5T6F2 1119 aaKnown RBP12.12□□□□□ -0.47
TREX1-203ENST00000456089 TRIM40Q6P9F5 258 aa12.12□□□□□ -0.47
TREX1-203ENST00000456089 NCCRP1Q6ZVX7 275 aaPredicted RBP12.12□□□□□ -0.47
TREX1-203ENST00000456089 MYLK4Q86YV6 388 aaPredicted RBP12.12□□□□□ -0.47
TREX1-203ENST00000456089 TEX9Q8N6V9 391 aa12.12□□□□□ -0.47
TREX1-203ENST00000456089 MDS2Q8NDY4 140 aa12.12□□□□□ -0.47
TREX1-203ENST00000456089 ARMC2Q8NEN0 867 aa12.12□□□□□ -0.47
TREX1-203ENST00000456089 M1APQ8TC57 530 aa12.12□□□□□ -0.47
TREX1-203ENST00000456089 GAL3ST3Q96A11 431 aa12.12□□□□□ -0.47
TREX1-203ENST00000456089 UTP23Q9BRU9 249 aaKnown RBP12.12□□□□□ -0.47
TREX1-203ENST00000456089 REXO4Q9GZR2 422 aaKnown RBP12.12□□□□□ -0.47
TREX1-203ENST00000456089 AICDAQ9GZX7 198 aa12.12□□□□□ -0.47
TREX1-203ENST00000456089 CDCP1Q9H5V8 836 aa12.12□□□□□ -0.47
TREX1-203ENST00000456089 COPS7BQ9H9Q2 264 aaPredicted RBP12.12□□□□□ -0.47
TREX1-203ENST00000456089 TINAGQ9UJW2 476 aa12.12□□□□□ -0.47
TREX1-203ENST00000456089 ZNF180Q9UJW8 692 aa12.12□□□□□ -0.47
TREX1-203ENST00000456089 TNPO3Q9Y5L0 923 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms