RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 PAGE2BQ5JRK9 111 aa15.17■□□□□ 0.02
SNX17-204ENST00000453453 AGAP7PQ5VUJ5 663 aa15.17■□□□□ 0.02
SNX17-204ENST00000453453 HIST2H2AA3Q6FI13 130 aa15.17■□□□□ 0.02
SNX17-204ENST00000453453 XAF1Q6GPH4 301 aa15.17■□□□□ 0.02
SNX17-204ENST00000453453 RIMKLAQ8IXN7 391 aa15.17■□□□□ 0.02
SNX17-204ENST00000453453 LMNTD1Q8N9Z9 388 aa15.17■□□□□ 0.02
SNX17-204ENST00000453453 LINC01555Q8NAE3 123 aa15.17■□□□□ 0.02
SNX17-204ENST00000453453 NEIL2Q969S2 332 aa15.17■□□□□ 0.02
SNX17-204ENST00000453453 MUL1Q969V5 352 aa15.17■□□□□ 0.02
SNX17-204ENST00000453453 SLC22A18Q96BI1 424 aa15.17■□□□□ 0.02
SNX17-204ENST00000453453 REPS1Q96D71 796 aa15.17■□□□□ 0.02
SNX17-204ENST00000453453 SLC39A3Q9BRY0 314 aa15.17■□□□□ 0.02
SNX17-204ENST00000453453 EFCAB11Q9BUY7 163 aa15.17■□□□□ 0.02
SNX17-204ENST00000453453 ACAT2Q9BWD1 397 aa15.17■□□□□ 0.02
SNX17-204ENST00000453453 NAA50Q9GZZ1 169 aaKnown RBP15.17■□□□□ 0.02
SNX17-204ENST00000453453 EHD1Q9H4M9 534 aa15.17■□□□□ 0.02
SNX17-204ENST00000453453 ANKHQ9HCJ1 492 aa15.17■□□□□ 0.02
SNX17-204ENST00000453453 UCKL1Q9NWZ5 548 aa15.17■□□□□ 0.02
SNX17-204ENST00000453453 ZIM2Q9NZV7 527 aa15.17■□□□□ 0.02
SNX17-204ENST00000453453 ENPP5Q9UJA9 477 aa15.17■□□□□ 0.02
SNX17-204ENST00000453453 PCDHGA5Q9Y5G8 931 aa15.17■□□□□ 0.02
SNX17-204ENST00000453453 GPR45Q9Y5Y3 372 aa15.17■□□□□ 0.02
SNX17-204ENST00000453453 A0A1B0GTQ1 180 aa15.16■□□□□ 0.02
SNX17-204ENST00000453453 FAM149AA5PLN7 773 aa15.16■□□□□ 0.02
SNX17-204ENST00000453453 EPN2O95208 641 aa15.16■□□□□ 0.02
SNX17-204ENST00000453453 C1GALT1C1LP0DN25 315 aa15.16■□□□□ 0.02
SNX17-204ENST00000453453 ALPPL2P10696 532 aa15.16■□□□□ 0.02
SNX17-204ENST00000453453 CRHBPP24387 322 aa15.16■□□□□ 0.02
SNX17-204ENST00000453453 EPHA8P29322 1005 aaPredicted RBP15.16■□□□□ 0.02
SNX17-204ENST00000453453 CASP2P42575 452 aa15.16■□□□□ 0.02
SNX17-204ENST00000453453 LIPEQ05469 1076 aa15.16■□□□□ 0.02
SNX17-204ENST00000453453 NFYCQ13952 458 aa15.16■□□□□ 0.02
SNX17-204ENST00000453453 DOC2AQ14183 400 aa15.16■□□□□ 0.02
SNX17-204ENST00000453453 RPS6KA2Q15349 733 aa15.16■□□□□ 0.02
SNX17-204ENST00000453453 CPSF6Q16630 551 aaKnown RBP eCLIP15.16■□□□□ 0.02
SNX17-204ENST00000453453 HLA-BQ31612 363 aa15.16■□□□□ 0.02
SNX17-204ENST00000453453 ATG9BQ674R7 924 aa15.16■□□□□ 0.02
SNX17-204ENST00000453453 GRHL2Q6ISB3 625 aa15.16■□□□□ 0.02
SNX17-204ENST00000453453 SLC23A3Q6PIS1 610 aa15.16■□□□□ 0.02
SNX17-204ENST00000453453 OGFOD3Q6PK18 319 aa15.16■□□□□ 0.02
SNX17-204ENST00000453453 NXPE4Q6UWF7 544 aa15.16■□□□□ 0.02
SNX17-204ENST00000453453 ANKRD13BQ86YJ7 626 aa15.16■□□□□ 0.02
SNX17-204ENST00000453453 OFCC1Q8IZS5 231 aa15.16■□□□□ 0.02
SNX17-204ENST00000453453 C8orf59Q8N0T1 100 aaPredicted RBP15.16■□□□□ 0.02
SNX17-204ENST00000453453 ABHD11Q8NFV4 315 aa15.16■□□□□ 0.02
SNX17-204ENST00000453453 FAM110BQ8TC76 370 aa15.16■□□□□ 0.02
SNX17-204ENST00000453453 JPH3Q8WXH2 748 aaPredicted RBP15.16■□□□□ 0.02
SNX17-204ENST00000453453 C3orf30Q96M34 536 aa15.16■□□□□ 0.02
SNX17-204ENST00000453453 ALPK1Q96QP1 1244 aa15.16■□□□□ 0.02
SNX17-204ENST00000453453 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.16■□□□□ 0.02
SNX17-204ENST00000453453 BRINP2Q9C0B6 783 aa15.16■□□□□ 0.02
SNX17-204ENST00000453453 ELOVL6Q9H5J4 265 aa15.16■□□□□ 0.02
SNX17-204ENST00000453453 PELI2Q9HAT8 420 aa15.16■□□□□ 0.02
SNX17-204ENST00000453453 CAPN10Q9HC96 672 aa15.16■□□□□ 0.02
SNX17-204ENST00000453453 PRM3Q9NNZ6 103 aa15.16■□□□□ 0.02
SNX17-204ENST00000453453 AKIP1Q9NQ31 210 aa15.16■□□□□ 0.02
SNX17-204ENST00000453453 AIG1Q9NVV5 245 aa15.16■□□□□ 0.02
SNX17-204ENST00000453453 EGFL7Q9UHF1 273 aa15.16■□□□□ 0.02
SNX17-204ENST00000453453 PCDHB3Q9Y5E6 796 aa15.16■□□□□ 0.02
SNX17-204ENST00000453453 PCDHGA11Q9Y5H2 935 aa15.16■□□□□ 0.02
SNX17-204ENST00000453453 A0A1W2PPV9 198 aa15.15■□□□□ 0.02
SNX17-204ENST00000453453 ISM1B1AKI9 464 aa15.15■□□□□ 0.02
SNX17-204ENST00000453453 MANBAO00462 879 aa15.15■□□□□ 0.02
SNX17-204ENST00000453453 DLL1O00548 723 aa15.15■□□□□ 0.02
SNX17-204ENST00000453453 FFAR3O14843 346 aa15.15■□□□□ 0.02
SNX17-204ENST00000453453 PIP5K1BO14986 540 aa15.15■□□□□ 0.02
SNX17-204ENST00000453453 GPR42O15529 346 aa15.15■□□□□ 0.02
SNX17-204ENST00000453453 ULK1O75385 1050 aa15.15■□□□□ 0.02
SNX17-204ENST00000453453 SNAP29O95721 258 aa15.15■□□□□ 0.02
SNX17-204ENST00000453453 CHRM5P08912 532 aaPredicted RBP15.15■□□□□ 0.02
SNX17-204ENST00000453453 CXCR2P25025 360 aa15.15■□□□□ 0.02
SNX17-204ENST00000453453 FASLGP48023 281 aa15.15■□□□□ 0.02
SNX17-204ENST00000453453 ARSFP54793 590 aa15.15■□□□□ 0.02
SNX17-204ENST00000453453 MAZP56270 477 aaKnown RBP15.15■□□□□ 0.02
SNX17-204ENST00000453453 ABATP80404 500 aa15.15■□□□□ 0.02
SNX17-204ENST00000453453 EMX2Q04743 252 aa15.15■□□□□ 0.02
SNX17-204ENST00000453453 IL18R1Q13478 541 aa15.15■□□□□ 0.02
SNX17-204ENST00000453453 KIR2DS3Q14952 304 aa15.15■□□□□ 0.02
SNX17-204ENST00000453453 VPS26BQ4G0F5 336 aa15.15■□□□□ 0.02
SNX17-204ENST00000453453 C14orf28Q4W4Y0 310 aa15.15■□□□□ 0.02
SNX17-204ENST00000453453 C6orf132Q5T0Z8 1188 aa15.15■□□□□ 0.02
SNX17-204ENST00000453453 TMEM53Q6P2H8 277 aa15.15■□□□□ 0.02
SNX17-204ENST00000453453 SLCO4C1Q6ZQN7 724 aa15.15■□□□□ 0.02
SNX17-204ENST00000453453 CCDC80Q76M96 950 aa15.15■□□□□ 0.02
SNX17-204ENST00000453453 KRT78Q8N1N4 520 aa15.15■□□□□ 0.02
SNX17-204ENST00000453453 SVOPLQ8N434 492 aa15.15■□□□□ 0.02
SNX17-204ENST00000453453 ARL14Q8N4G2 192 aa15.15■□□□□ 0.02
SNX17-204ENST00000453453 DPP10Q8N608 796 aa15.15■□□□□ 0.02
SNX17-204ENST00000453453 MAGEE2Q8TD90 523 aaPredicted RBP15.15■□□□□ 0.02
SNX17-204ENST00000453453 UBE2E3Q969T4 207 aa15.15■□□□□ 0.02
SNX17-204ENST00000453453 TAMM41Q96BW9 452 aa15.15■□□□□ 0.02
SNX17-204ENST00000453453 SH3YL1Q96HL8 342 aaPredicted RBP15.15■□□□□ 0.02
SNX17-204ENST00000453453 ING2Q9H160 280 aa15.15■□□□□ 0.02
SNX17-204ENST00000453453 UCK1Q9HA47 277 aa15.15■□□□□ 0.02
SNX17-204ENST00000453453 BTRCQ9Y297 605 aa15.15■□□□□ 0.02
SNX17-204ENST00000453453 ADAMTS9Q9P2N4 1935 aa15.15■□□□□ 0.02
SNX17-204ENST00000453453 PIPSLA2A3N6 862 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 TMX2-CTNND1H3BSU7 103 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 ARHGAP33O14559 1287 aa15.14■□□□□ 0.01
SNX17-204ENST00000453453 SLC22A1O15245 554 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms