RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 PYROXD1Q8WU10 500 aa25.31■■□□□ 1.64
USP42-204ENST00000451154 QRFPRQ96P65 431 aa25.31■■□□□ 1.64
USP42-204ENST00000451154 PHF12Q96QT6 1004 aa25.31■■□□□ 1.64
USP42-204ENST00000451154 TMEM79Q9BSE2 394 aa25.31■■□□□ 1.64
USP42-204ENST00000451154 NT5DC2Q9H857 520 aa25.31■■□□□ 1.64
USP42-204ENST00000451154 TEP1Q99973 2627 aaKnown RBP25.3■■□□□ 1.64
USP42-204ENST00000451154 ANKDD1BA6NHY2 528 aa25.3■■□□□ 1.64
USP42-204ENST00000451154 TBX6O95947 436 aaPredicted RBP25.3■■□□□ 1.64
USP42-204ENST00000451154 CCDC166P0CW27 439 aa25.3■■□□□ 1.64
USP42-204ENST00000451154 COX6B1P14854 86 aa25.3■■□□□ 1.64
USP42-204ENST00000451154 RFC3P40938 356 aa25.3■■□□□ 1.64
USP42-204ENST00000451154 MEOX1P50221 254 aa25.3■■□□□ 1.64
USP42-204ENST00000451154 SLC13A2Q13183 592 aa25.3■■□□□ 1.64
USP42-204ENST00000451154 CBLBQ13191 982 aa25.3■■□□□ 1.64
USP42-204ENST00000451154 C3P1Q6ZMU1 363 aa25.3■■□□□ 1.64
USP42-204ENST00000451154 VN1R5Q7Z5H4 357 aa25.3■■□□□ 1.64
USP42-204ENST00000451154 FGD2Q7Z6J4 655 aa25.3■■□□□ 1.64
USP42-204ENST00000451154 DOLPP1Q86YN1 238 aa25.3■■□□□ 1.64
USP42-204ENST00000451154 GPSM1Q86YR5 675 aa25.3■■□□□ 1.64
USP42-204ENST00000451154 SULF2Q8IWU5 870 aa25.3■■□□□ 1.64
USP42-204ENST00000451154 FAM47BQ8NA70 645 aa25.3■■□□□ 1.64
USP42-204ENST00000451154 AGAP11Q8TF27 550 aa25.3■■□□□ 1.64
USP42-204ENST00000451154 CAPS2Q9BXY5 557 aa25.3■■□□□ 1.64
USP42-204ENST00000451154 SAYSD1Q9NPB0 183 aa25.3■■□□□ 1.64
USP42-204ENST00000451154 WWOXQ9NZC7 414 aa25.3■■□□□ 1.64
USP42-204ENST00000451154 ZNF223Q9UK11 482 aaPredicted RBP25.3■■□□□ 1.64
USP42-204ENST00000451154 ZNF490Q9ULM2 529 aaPredicted RBP25.3■■□□□ 1.64
USP42-204ENST00000451154 CLDN16Q9Y5I7 305 aa25.3■■□□□ 1.64
USP42-204ENST00000451154 CLDN4O14493 209 aa25.29■■□□□ 1.64
USP42-204ENST00000451154 PHGDHO43175 533 aaKnown RBP25.29■■□□□ 1.64
USP42-204ENST00000451154 B3GALT2O43825 422 aa25.29■■□□□ 1.64
USP42-204ENST00000451154 CLEC3AO75596 197 aa25.29■■□□□ 1.64
USP42-204ENST00000451154 AGAP20933 346 aa25.29■■□□□ 1.64
USP42-204ENST00000451154 PTGER1P34995 402 aa25.29■■□□□ 1.64
USP42-204ENST00000451154 HSPA7P48741 367 aa25.29■■□□□ 1.64
USP42-204ENST00000451154 HSD17B7P56937 341 aa25.29■■□□□ 1.64
USP42-204ENST00000451154 RAB38P57729 211 aa25.29■■□□□ 1.64
USP42-204ENST00000451154 ADNP2Q6IQ32 1131 aa25.29■■□□□ 1.64
USP42-204ENST00000451154 CLNKQ7Z7G1 428 aa25.29■■□□□ 1.64
USP42-204ENST00000451154 TMEM156Q8N614 296 aa25.29■■□□□ 1.64
USP42-204ENST00000451154 SNX31Q8N9S9 440 aa25.29■■□□□ 1.64
USP42-204ENST00000451154 NCLNQ969V3 563 aa25.29■■□□□ 1.64
USP42-204ENST00000451154 REXO4Q9GZR2 422 aaKnown RBP25.29■■□□□ 1.64
USP42-204ENST00000451154 LIN28AQ9H9Z2 209 aaKnown RBP25.29■■□□□ 1.64
USP42-204ENST00000451154 DNAJC11Q9NVH1 559 aa25.29■■□□□ 1.64
USP42-204ENST00000451154 GPRC5BQ9NZH0 403 aa25.29■■□□□ 1.64
USP42-204ENST00000451154 KLF13Q9Y2Y9 288 aaPredicted RBP25.29■■□□□ 1.64
USP42-204ENST00000451154 ASB1Q9Y576 335 aa25.29■■□□□ 1.64
USP42-204ENST00000451154 MYOCOSA0A1B0GUC4 107 aa25.28■■□□□ 1.64
USP42-204ENST00000451154 C19orf84I3L1E1 186 aa25.28■■□□□ 1.64
USP42-204ENST00000451154 CLGNO14967 610 aa25.28■■□□□ 1.64
USP42-204ENST00000451154 PEX1O43933 1283 aa25.28■■□□□ 1.64
USP42-204ENST00000451154 ITGA10O75578 1167 aa25.28■■□□□ 1.64
USP42-204ENST00000451154 GGT5P36269 586 aa25.28■■□□□ 1.64
USP42-204ENST00000451154 GPR143P51810 404 aa25.28■■□□□ 1.64
USP42-204ENST00000451154 OR4D1Q15615 310 aa25.28■■□□□ 1.64
USP42-204ENST00000451154 C16orf47Q6ZP98 133 aaPredicted RBP25.28■■□□□ 1.64
USP42-204ENST00000451154 MDGA2Q7Z553 956 aa25.28■■□□□ 1.64
USP42-204ENST00000451154 TCAIMQ8N3R3 496 aa25.28■■□□□ 1.64
USP42-204ENST00000451154 BBOF1Q8ND07 529 aa25.28■■□□□ 1.64
USP42-204ENST00000451154 OR2L5Q8NG80 312 aa25.28■■□□□ 1.64
USP42-204ENST00000451154 VMP1Q96GC9 406 aa25.28■■□□□ 1.64
USP42-204ENST00000451154 PITHD1Q9GZP4 211 aaPredicted RBP25.28■■□□□ 1.64
USP42-204ENST00000451154 DPH5Q9H2P9 285 aa25.28■■□□□ 1.64
USP42-204ENST00000451154 CNOT10Q9H9A5 744 aaKnown RBP25.28■■□□□ 1.64
USP42-204ENST00000451154 PPIEQ9UNP9 301 aaKnown RBP25.28■■□□□ 1.64
USP42-204ENST00000451154 CSMD2Q7Z408 3487 aa25.28■■□□□ 1.64
USP42-204ENST00000451154 A0A088AWK7 358 aa25.27■■□□□ 1.64
USP42-204ENST00000451154 KLRC4-KLRK1H3BQV0 150 aa25.27■■□□□ 1.64
USP42-204ENST00000451154 PRKNO60260 465 aaPredicted RBP25.27■■□□□ 1.64
USP42-204ENST00000451154 CD1DP15813 335 aa25.27■■□□□ 1.64
USP42-204ENST00000451154 ZNF10P21506 573 aaPredicted RBP25.27■■□□□ 1.64
USP42-204ENST00000451154 GSTM2P28161 218 aa25.27■■□□□ 1.64
USP42-204ENST00000451154 PTGER4P35408 488 aa25.27■■□□□ 1.64
USP42-204ENST00000451154 DOC2AQ14183 400 aa25.27■■□□□ 1.64
USP42-204ENST00000451154 TERF2Q15554 542 aa25.27■■□□□ 1.64
USP42-204ENST00000451154 ADPRMQ3LIE5 342 aa25.27■■□□□ 1.64
USP42-204ENST00000451154 XKR6Q5GH73 641 aa25.27■■□□□ 1.64
USP42-204ENST00000451154 SULT1C3Q6IMI6 304 aa25.27■■□□□ 1.64
USP42-204ENST00000451154 CYP4Z2PQ8N1L4 340 aa25.27■■□□□ 1.64
USP42-204ENST00000451154 POGLUT1Q8NBL1 392 aa25.27■■□□□ 1.64
USP42-204ENST00000451154 MTFMTQ96DP5 389 aaKnown RBP25.27■■□□□ 1.64
USP42-204ENST00000451154 TSPAN17Q96FV3 270 aa25.27■■□□□ 1.64
USP42-204ENST00000451154 SEC16BQ96JE7 1060 aa25.27■■□□□ 1.64
USP42-204ENST00000451154 F2RL3Q96RI0 385 aa25.27■■□□□ 1.64
USP42-204ENST00000451154 CSF3RQ99062 836 aa25.27■■□□□ 1.64
USP42-204ENST00000451154 EHD1Q9H4M9 534 aa25.27■■□□□ 1.64
USP42-204ENST00000451154 TXNDC16Q9P2K2 825 aa25.27■■□□□ 1.64
USP42-204ENST00000451154 CYR61O00622 381 aa25.26■■□□□ 1.63
USP42-204ENST00000451154 PRRG2O14669 202 aa25.26■■□□□ 1.63
USP42-204ENST00000451154 ADAM10O14672 748 aa25.26■■□□□ 1.63
USP42-204ENST00000451154 TFECO14948 347 aaPredicted RBP25.26■■□□□ 1.63
USP42-204ENST00000451154 FANCGO15287 622 aa25.26■■□□□ 1.63
USP42-204ENST00000451154 STK16O75716 305 aa25.26■■□□□ 1.63
USP42-204ENST00000451154 CLDN14O95500 239 aa25.26■■□□□ 1.63
USP42-204ENST00000451154 CERS1P27544 350 aa25.26■■□□□ 1.63
USP42-204ENST00000451154 LIM2P55344 173 aa25.26■■□□□ 1.63
USP42-204ENST00000451154 TRIM40Q6P9F5 258 aa25.26■■□□□ 1.63
USP42-204ENST00000451154 ABHD17CQ6PCB6 329 aa25.26■■□□□ 1.63
USP42-204ENST00000451154 GDF7Q7Z4P5 450 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms