RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 TCF7L2Q9NQB0 619 aa12.34□□□□□ -0.43
VPS33A-202ENST00000451053 PRDM7Q9NQW5 492 aa12.34□□□□□ -0.43
VPS33A-202ENST00000451053 MRGBPQ9NV56 204 aa12.34□□□□□ -0.43
VPS33A-202ENST00000451053 HCN3Q9P1Z3 774 aa12.34□□□□□ -0.43
VPS33A-202ENST00000451053 IFT80Q9P2H3 777 aaPredicted RBP12.34□□□□□ -0.43
VPS33A-202ENST00000451053 CTSFQ9UBX1 484 aa12.34□□□□□ -0.43
VPS33A-202ENST00000451053 CROTQ9UKG9 612 aa12.34□□□□□ -0.43
VPS33A-202ENST00000451053 TRIM33Q9UPN9 1127 aa12.34□□□□□ -0.43
VPS33A-202ENST00000451053 RAXQ9Y2V3 346 aa12.34□□□□□ -0.43
VPS33A-202ENST00000451053 AKAP13Q12802 2813 aa12.34□□□□□ -0.43
VPS33A-202ENST00000451053 SERTM1A2A2V5 107 aa12.33□□□□□ -0.44
VPS33A-202ENST00000451053 C9J4A7 227 aa12.33□□□□□ -0.44
VPS33A-202ENST00000451053 H0YIG0 161 aa12.33□□□□□ -0.44
VPS33A-202ENST00000451053 TAF4O00268 1085 aa12.33□□□□□ -0.44
VPS33A-202ENST00000451053 RGS14O43566 566 aa12.33□□□□□ -0.44
VPS33A-202ENST00000451053 DCTN3O75935 186 aa12.33□□□□□ -0.44
VPS33A-202ENST00000451053 TCN2P20062 427 aa12.33□□□□□ -0.44
VPS33A-202ENST00000451053 F8A1P23610 371 aa12.33□□□□□ -0.44
VPS33A-202ENST00000451053 BSGP35613 385 aa12.33□□□□□ -0.44
VPS33A-202ENST00000451053 DLSTP36957 453 aa12.33□□□□□ -0.44
VPS33A-202ENST00000451053 EIF2S3P41091 472 aaKnown RBP12.33□□□□□ -0.44
VPS33A-202ENST00000451053 SSR2P43308 183 aa12.33□□□□□ -0.44
VPS33A-202ENST00000451053 IDH3AP50213 366 aa12.33□□□□□ -0.44
VPS33A-202ENST00000451053 FOXL2P58012 376 aa12.33□□□□□ -0.44
VPS33A-202ENST00000451053 FOXK2Q01167 660 aa12.33□□□□□ -0.44
VPS33A-202ENST00000451053 HMGCS1Q01581 520 aa12.33□□□□□ -0.44
VPS33A-202ENST00000451053 TGM3Q08188 693 aa12.33□□□□□ -0.44
VPS33A-202ENST00000451053 DNASE1L3Q13609 305 aa12.33□□□□□ -0.44
VPS33A-202ENST00000451053 FAM69BQ5VUD6 431 aa12.33□□□□□ -0.44
VPS33A-202ENST00000451053 MLIPQ5VWP3 458 aa12.33□□□□□ -0.44
VPS33A-202ENST00000451053 METTL21CQ5VZV1 264 aa12.33□□□□□ -0.44
VPS33A-202ENST00000451053 OR4C11Q6IEV9 310 aa12.33□□□□□ -0.44
VPS33A-202ENST00000451053 MAVSQ7Z434 540 aa12.33□□□□□ -0.44
VPS33A-202ENST00000451053 GBP7Q8N8V2 638 aaPredicted RBP12.33□□□□□ -0.44
VPS33A-202ENST00000451053 CEP70Q8NHQ1 597 aa12.33□□□□□ -0.44
VPS33A-202ENST00000451053 ACTRT2Q8TDY3 377 aa12.33□□□□□ -0.44
VPS33A-202ENST00000451053 FKBP10Q96AY3 582 aa12.33□□□□□ -0.44
VPS33A-202ENST00000451053 MAELQ96JY0 434 aaKnown RBP12.33□□□□□ -0.44
VPS33A-202ENST00000451053 CENPKQ9BS16 269 aa12.33□□□□□ -0.44
VPS33A-202ENST00000451053 TBCDQ9BTW9 1192 aa12.33□□□□□ -0.44
VPS33A-202ENST00000451053 ZNF717Q9BY31 904 aaPredicted RBP12.33□□□□□ -0.44
VPS33A-202ENST00000451053 KCNK13Q9HB14 408 aa12.33□□□□□ -0.44
VPS33A-202ENST00000451053 NMRK1Q9NWW6 199 aa12.33□□□□□ -0.44
VPS33A-202ENST00000451053 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.33□□□□□ -0.44
VPS33A-202ENST00000451053 TRPC4Q9UBN4 977 aa12.33□□□□□ -0.44
VPS33A-202ENST00000451053 SCN3AQ9NY46 2000 aa12.33□□□□□ -0.44
VPS33A-202ENST00000451053 SDHDO14521 159 aa12.32□□□□□ -0.44
VPS33A-202ENST00000451053 KLK10O43240 276 aa12.32□□□□□ -0.44
VPS33A-202ENST00000451053 CHST10O43529 356 aa12.32□□□□□ -0.44
VPS33A-202ENST00000451053 EEDO75530 441 aaKnown RBP12.32□□□□□ -0.44
VPS33A-202ENST00000451053 SEMA3DO95025 777 aa12.32□□□□□ -0.44
VPS33A-202ENST00000451053 LINC00032P0C843 101 aa12.32□□□□□ -0.44
VPS33A-202ENST00000451053 PIM1P11309 404 aaPredicted RBP12.32□□□□□ -0.44
VPS33A-202ENST00000451053 LIFP15018 202 aa12.32□□□□□ -0.44
VPS33A-202ENST00000451053 HIST1H1TP22492 207 aaPredicted RBP12.32□□□□□ -0.44
VPS33A-202ENST00000451053 ATP5A1P25705 553 aaKnown RBP12.32□□□□□ -0.44
VPS33A-202ENST00000451053 MTTPP55157 894 aa12.32□□□□□ -0.44
VPS33A-202ENST00000451053 RPS18P62269 152 aaKnown RBP12.32□□□□□ -0.44
VPS33A-202ENST00000451053 SKP1P63208 163 aa12.32□□□□□ -0.44
VPS33A-202ENST00000451053 IRX1P78414 480 aaPredicted RBP12.32□□□□□ -0.44
VPS33A-202ENST00000451053 TBL3Q12788 808 aaKnown RBP12.32□□□□□ -0.44
VPS33A-202ENST00000451053 RUNX2Q13950 521 aa12.32□□□□□ -0.44
VPS33A-202ENST00000451053 NCF4Q15080 339 aa12.32□□□□□ -0.44
VPS33A-202ENST00000451053 IMPG1Q17R60 797 aa12.32□□□□□ -0.44
VPS33A-202ENST00000451053 AP5B1Q2VPB7 878 aa12.32□□□□□ -0.44
VPS33A-202ENST00000451053 XKR7Q5GH72 579 aa12.32□□□□□ -0.44
VPS33A-202ENST00000451053 VWA5B1Q5TIE3 1220 aa12.32□□□□□ -0.44
VPS33A-202ENST00000451053 MRPL14Q6P1L8 145 aaKnown RBP12.32□□□□□ -0.44
VPS33A-202ENST00000451053 OVCH1Q7RTY7 1134 aa12.32□□□□□ -0.44
VPS33A-202ENST00000451053 TRIM46Q7Z4K8 759 aa12.32□□□□□ -0.44
VPS33A-202ENST00000451053 PROSER1Q86XN7 944 aa12.32□□□□□ -0.44
VPS33A-202ENST00000451053 ZC3H7AQ8IWR0 971 aaKnown RBP12.32□□□□□ -0.44
VPS33A-202ENST00000451053 CA13Q8N1Q1 262 aa12.32□□□□□ -0.44
VPS33A-202ENST00000451053 ENDOVQ8N8Q3 282 aaKnown RBP12.32□□□□□ -0.44
VPS33A-202ENST00000451053 ACOT4Q8N9L9 421 aa12.32□□□□□ -0.44
VPS33A-202ENST00000451053 SRFBP1Q8NEF9 429 aaKnown RBP12.32□□□□□ -0.44
VPS33A-202ENST00000451053 OR2T11Q8NH01 316 aa12.32□□□□□ -0.44
VPS33A-202ENST00000451053 PPP3R2Q96LZ3 170 aa12.32□□□□□ -0.44
VPS33A-202ENST00000451053 DCBLD2Q96PD2 775 aa12.32□□□□□ -0.44
VPS33A-202ENST00000451053 SERINC2Q96SA4 455 aa12.32□□□□□ -0.44
VPS33A-202ENST00000451053 YIPF2Q9BWQ6 316 aa12.32□□□□□ -0.44
VPS33A-202ENST00000451053 COPS7BQ9H9Q2 264 aaPredicted RBP12.32□□□□□ -0.44
VPS33A-202ENST00000451053 GPN2Q9H9Y4 310 aaPredicted RBP12.32□□□□□ -0.44
VPS33A-202ENST00000451053 VPS29Q9UBQ0 182 aa12.32□□□□□ -0.44
VPS33A-202ENST00000451053 IL17BQ9UHF5 180 aa12.32□□□□□ -0.44
VPS33A-202ENST00000451053 GPN3Q9UHW5 284 aaPredicted RBP12.32□□□□□ -0.44
VPS33A-202ENST00000451053 MAP4K5Q9Y4K4 846 aa12.32□□□□□ -0.44
VPS33A-202ENST00000451053 CCL27Q9Y4X3 112 aa12.32□□□□□ -0.44
VPS33A-202ENST00000451053 MRPS18BQ9Y676 258 aaKnown RBP12.32□□□□□ -0.44
VPS33A-202ENST00000451053 IGLV3-12A0A075B6K2 115 aa12.31□□□□□ -0.44
VPS33A-202ENST00000451053 A0A088AWK7 358 aa12.31□□□□□ -0.44
VPS33A-202ENST00000451053 GOLGA8QA0A0J9YX86 632 aa12.31□□□□□ -0.44
VPS33A-202ENST00000451053 GOLGA8OA6NCC3 632 aa12.31□□□□□ -0.44
VPS33A-202ENST00000451053 TMEM8BA6NDV4 472 aa12.31□□□□□ -0.44
VPS33A-202ENST00000451053 C21orf140B9A014 251 aa12.31□□□□□ -0.44
VPS33A-202ENST00000451053 GOLGA8NF8WBI6 632 aa12.31□□□□□ -0.44
VPS33A-202ENST00000451053 B3GALT2O43825 422 aa12.31□□□□□ -0.44
VPS33A-202ENST00000451053 CCDC22O60826 627 aa12.31□□□□□ -0.44
VPS33A-202ENST00000451053 JRKO75564 520 aa12.31□□□□□ -0.44
VPS33A-202ENST00000451053 SCELO95171 688 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms