RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 POM121CA8CG34 1229 aa11.92□□□□□ -0.5
UBE3B-204ENST00000449510 TNFRSF10AO00220 468 aa11.92□□□□□ -0.5
UBE3B-204ENST00000449510 KLHL18O94889 574 aa11.92□□□□□ -0.5
UBE3B-204ENST00000449510 PPIBP23284 216 aaKnown RBP11.92□□□□□ -0.5
UBE3B-204ENST00000449510 CRISP1P54107 249 aa11.92□□□□□ -0.5
UBE3B-204ENST00000449510 DEFA5Q01523 94 aa11.92□□□□□ -0.5
UBE3B-204ENST00000449510 SLC14A1Q13336 389 aa11.92□□□□□ -0.5
UBE3B-204ENST00000449510 SLBPQ14493 270 aaKnown RBP eCLIP11.92□□□□□ -0.5
UBE3B-204ENST00000449510 ZNF791Q3KP31 576 aaPredicted RBP11.92□□□□□ -0.5
UBE3B-204ENST00000449510 SPATS1Q496A3 300 aa11.92□□□□□ -0.5
UBE3B-204ENST00000449510 GDF6Q6KF10 455 aaPredicted RBP11.92□□□□□ -0.5
UBE3B-204ENST00000449510 ANKRD54Q6NXT1 300 aa11.92□□□□□ -0.5
UBE3B-204ENST00000449510 PHYKPLQ8IUZ5 450 aa11.92□□□□□ -0.5
UBE3B-204ENST00000449510 DNAJC22Q8N4W6 341 aa11.92□□□□□ -0.5
UBE3B-204ENST00000449510 NEIL3Q8TAT5 605 aa11.92□□□□□ -0.5
UBE3B-204ENST00000449510 CIDECQ96AQ7 238 aaPredicted RBP11.92□□□□□ -0.5
UBE3B-204ENST00000449510 DUS3LQ96G46 650 aaKnown RBP11.92□□□□□ -0.5
UBE3B-204ENST00000449510 ZNF300Q96RE9 604 aaPredicted RBP11.92□□□□□ -0.5
UBE3B-204ENST00000449510 GSDMCQ9BYG8 508 aa11.92□□□□□ -0.5
UBE3B-204ENST00000449510 KCNK12Q9HB15 430 aa11.92□□□□□ -0.5
UBE3B-204ENST00000449510 ARNT2Q9HBZ2 717 aa11.92□□□□□ -0.5
UBE3B-204ENST00000449510 TMEM39AQ9NV64 488 aa11.92□□□□□ -0.5
UBE3B-204ENST00000449510 RABL2BQ9UNT1 228 aa11.92□□□□□ -0.5
UBE3B-204ENST00000449510 OR2A25A4D2G3 310 aa11.91□□□□□ -0.5
UBE3B-204ENST00000449510 AKR1A1P14550 325 aa11.91□□□□□ -0.5
UBE3B-204ENST00000449510 FNTBP49356 437 aa11.91□□□□□ -0.5
UBE3B-204ENST00000449510 STK19P49842 368 aaPredicted RBP11.91□□□□□ -0.5
UBE3B-204ENST00000449510 MAZP56270 477 aaKnown RBP11.91□□□□□ -0.5
UBE3B-204ENST00000449510 BAK1Q16611 211 aa11.91□□□□□ -0.5
UBE3B-204ENST00000449510 FAM205BPQ63HN1 556 aa11.91□□□□□ -0.5
UBE3B-204ENST00000449510 TXNDC8Q6A555 127 aa11.91□□□□□ -0.5
UBE3B-204ENST00000449510 RFLNAQ6ZTI6 216 aa11.91□□□□□ -0.5
UBE3B-204ENST00000449510 C10orf111Q8N326 155 aa11.91□□□□□ -0.5
UBE3B-204ENST00000449510 SYT14Q8NB59 555 aa11.91□□□□□ -0.5
UBE3B-204ENST00000449510 PGAP3Q96FM1 320 aaPredicted RBP11.91□□□□□ -0.5
UBE3B-204ENST00000449510 DUSP21Q9H596 190 aa11.91□□□□□ -0.5
UBE3B-204ENST00000449510 ENAMQ9NRM1 1142 aa11.91□□□□□ -0.5
UBE3B-204ENST00000449510 ALDH1A1P00352 501 aa11.91□□□□□ -0.5
UBE3B-204ENST00000449510 INHBBP09529 407 aa11.91□□□□□ -0.5
UBE3B-204ENST00000449510 HTR3AP46098 478 aa11.91□□□□□ -0.5
UBE3B-204ENST00000449510 CDK10Q15131 360 aa11.91□□□□□ -0.5
UBE3B-204ENST00000449510 C9orf64Q5T6V5 341 aa11.91□□□□□ -0.5
UBE3B-204ENST00000449510 CNIH2Q6PI25 160 aa11.91□□□□□ -0.5
UBE3B-204ENST00000449510 Q6ZVL8 140 aa11.91□□□□□ -0.5
UBE3B-204ENST00000449510 C9orf43Q8TAL5 461 aaPredicted RBP11.91□□□□□ -0.5
UBE3B-204ENST00000449510 RHBDF1Q96CC6 855 aa11.91□□□□□ -0.5
UBE3B-204ENST00000449510 TEFMQ96QE5 360 aaKnown RBP11.91□□□□□ -0.5
UBE3B-204ENST00000449510 GALNT9Q9HCQ5 603 aa11.91□□□□□ -0.5
UBE3B-204ENST00000449510 SEC14L4Q9UDX3 406 aa11.91□□□□□ -0.5
UBE3B-204ENST00000449510 CORO2BQ9UQ03 480 aa11.91□□□□□ -0.5
UBE3B-204ENST00000449510 LOC285095A0A1B0GVY8 99 aa11.91□□□□□ -0.5
UBE3B-204ENST00000449510 H1F0P07305 194 aaKnown RBP11.91□□□□□ -0.5
UBE3B-204ENST00000449510 C8orf89P0DMQ9 161 aa11.91□□□□□ -0.5
UBE3B-204ENST00000449510 HNF1BP35680 557 aa11.91□□□□□ -0.5
UBE3B-204ENST00000449510 LYPD8Q6UX82 237 aa11.91□□□□□ -0.5
UBE3B-204ENST00000449510 SLC46A3Q7Z3Q1 461 aa11.91□□□□□ -0.5
UBE3B-204ENST00000449510 THOC6Q86W42 341 aaKnown RBP11.91□□□□□ -0.5
UBE3B-204ENST00000449510 HMGB4Q8WW32 186 aa11.91□□□□□ -0.5
UBE3B-204ENST00000449510 FKBP10Q96AY3 582 aa11.91□□□□□ -0.5
UBE3B-204ENST00000449510 TSPAN18Q96SJ8 248 aa11.91□□□□□ -0.5
UBE3B-204ENST00000449510 NELL2Q99435 816 aa11.91□□□□□ -0.5
UBE3B-204ENST00000449510 IL26Q9NPH9 171 aa11.91□□□□□ -0.5
UBE3B-204ENST00000449510 ELOVL2Q9NXB9 296 aa11.91□□□□□ -0.5
UBE3B-204ENST00000449510 KLHL28Q9NXS3 571 aa11.91□□□□□ -0.5
UBE3B-204ENST00000449510 TMEFF2Q9UIK5 374 aaPredicted RBP11.91□□□□□ -0.5
UBE3B-204ENST00000449510 PLAGL1Q9UM63 463 aa11.91□□□□□ -0.5
UBE3B-204ENST00000449510 PPP2R3BQ9Y5P8 575 aa11.91□□□□□ -0.5
UBE3B-204ENST00000449510 EP400Q96L91 3159 aa11.9□□□□□ -0.5
UBE3B-204ENST00000449510 UPK1AO00322 258 aa11.9□□□□□ -0.5
UBE3B-204ENST00000449510 INPPL1O15357 1258 aa11.9□□□□□ -0.5
UBE3B-204ENST00000449510 FRS3O43559 492 aa11.9□□□□□ -0.5
UBE3B-204ENST00000449510 HPGDSO60760 199 aa11.9□□□□□ -0.5
UBE3B-204ENST00000449510 KHDRBS3O75525 346 aaKnown RBP11.9□□□□□ -0.5
UBE3B-204ENST00000449510 OR7A10O76100 309 aa11.9□□□□□ -0.5
UBE3B-204ENST00000449510 F2P00734 622 aa11.9□□□□□ -0.5
UBE3B-204ENST00000449510 PLATP00750 562 aa11.9□□□□□ -0.5
UBE3B-204ENST00000449510 URODP06132 367 aa11.9□□□□□ -0.5
UBE3B-204ENST00000449510 ERP29P30040 261 aaKnown RBP11.9□□□□□ -0.5
UBE3B-204ENST00000449510 HTR7P34969 479 aa11.9□□□□□ -0.5
UBE3B-204ENST00000449510 GGT2P36268 569 aa11.9□□□□□ -0.5
UBE3B-204ENST00000449510 ASMTP46597 345 aa11.9□□□□□ -0.5
UBE3B-204ENST00000449510 SNRPD1P62314 119 aaKnown RBP11.9□□□□□ -0.5
UBE3B-204ENST00000449510 MTAPQ13126 283 aa11.9□□□□□ -0.5
UBE3B-204ENST00000449510 DOC2AQ14183 400 aa11.9□□□□□ -0.5
UBE3B-204ENST00000449510 PCBP1Q15365 356 aaKnown RBP eCLIP11.9□□□□□ -0.5
UBE3B-204ENST00000449510 MED27Q6P2C8 311 aa11.9□□□□□ -0.5
UBE3B-204ENST00000449510 VWA5B2Q8N398 1253 aa11.9□□□□□ -0.5
UBE3B-204ENST00000449510 BOLLQ8N9W6 283 aaKnown RBP11.9□□□□□ -0.5
UBE3B-204ENST00000449510 OR51G2Q8NGK0 314 aa11.9□□□□□ -0.5
UBE3B-204ENST00000449510 COQ8AQ8NI60 647 aa11.9□□□□□ -0.5
UBE3B-204ENST00000449510 GEMIN6Q8WXD5 167 aaKnown RBP11.9□□□□□ -0.5
UBE3B-204ENST00000449510 ASB12Q8WXK4 309 aa11.9□□□□□ -0.5
UBE3B-204ENST00000449510 AUTS2Q8WXX7 1259 aa11.9□□□□□ -0.5
UBE3B-204ENST00000449510 MYEOVQ96EZ4 313 aa11.9□□□□□ -0.5
UBE3B-204ENST00000449510 ZNF607Q96SK3 696 aa11.9□□□□□ -0.5
UBE3B-204ENST00000449510 POPDC3Q9HBV1 291 aa11.9□□□□□ -0.5
UBE3B-204ENST00000449510 ZCCHC3Q9NUD5 404 aaKnown RBP11.9□□□□□ -0.5
UBE3B-204ENST00000449510 NUDT15Q9NV35 164 aa11.9□□□□□ -0.5
UBE3B-204ENST00000449510 SIRT5Q9NXA8 310 aa11.9□□□□□ -0.5
UBE3B-204ENST00000449510 PCDHB8Q9UN66 801 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms