RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 TMEM79Q9BSE2 394 aa26.38■■□□□ 1.81
CBX4-202ENST00000448310 TRIM8Q9BZR9 551 aa26.38■■□□□ 1.81
CBX4-202ENST00000448310 KLF13Q9Y2Y9 288 aaPredicted RBP26.38■■□□□ 1.81
CBX4-202ENST00000448310 MTO1Q9Y2Z2 717 aaKnown RBP26.38■■□□□ 1.81
CBX4-202ENST00000448310 TFECO14948 347 aaPredicted RBP26.37■■□□□ 1.81
CBX4-202ENST00000448310 TAPBPO15533 448 aa26.37■■□□□ 1.81
CBX4-202ENST00000448310 ITGA10O75578 1167 aa26.37■■□□□ 1.81
CBX4-202ENST00000448310 TBX6O95947 436 aaPredicted RBP26.37■■□□□ 1.81
CBX4-202ENST00000448310 SLC12A2P55011 1212 aa26.37■■□□□ 1.81
CBX4-202ENST00000448310 RAB38P57729 211 aa26.37■■□□□ 1.81
CBX4-202ENST00000448310 SLC13A2Q13183 592 aa26.37■■□□□ 1.81
CBX4-202ENST00000448310 C16orf47Q6ZP98 133 aaPredicted RBP26.37■■□□□ 1.81
CBX4-202ENST00000448310 VN1R5Q7Z5H4 357 aa26.37■■□□□ 1.81
CBX4-202ENST00000448310 CLNKQ7Z7G1 428 aa26.37■■□□□ 1.81
CBX4-202ENST00000448310 CYP4Z2PQ8N1L4 340 aa26.37■■□□□ 1.81
CBX4-202ENST00000448310 TMEM156Q8N614 296 aa26.37■■□□□ 1.81
CBX4-202ENST00000448310 TTLQ8NG68 377 aa26.37■■□□□ 1.81
CBX4-202ENST00000448310 ESAMQ96AP7 390 aa26.37■■□□□ 1.81
CBX4-202ENST00000448310 QRFPRQ96P65 431 aa26.37■■□□□ 1.81
CBX4-202ENST00000448310 NPLQ9BXD5 320 aaPredicted RBP26.37■■□□□ 1.81
CBX4-202ENST00000448310 POPDC3Q9HBV1 291 aa26.37■■□□□ 1.81
CBX4-202ENST00000448310 WWOXQ9NZC7 414 aa26.37■■□□□ 1.81
CBX4-202ENST00000448310 SAR1BQ9Y6B6 198 aa26.37■■□□□ 1.81
CBX4-202ENST00000448310 POLQO75417 2590 aa26.36■■□□□ 1.81
CBX4-202ENST00000448310 PRRG2O14669 202 aa26.36■■□□□ 1.81
CBX4-202ENST00000448310 ADAM10O14672 748 aa26.36■■□□□ 1.81
CBX4-202ENST00000448310 B3GALT2O43825 422 aa26.36■■□□□ 1.81
CBX4-202ENST00000448310 PRKNO60260 465 aaPredicted RBP26.36■■□□□ 1.81
CBX4-202ENST00000448310 PRAMEF4O60810 478 aa26.36■■□□□ 1.81
CBX4-202ENST00000448310 WISP3O95389 354 aaPredicted RBP26.36■■□□□ 1.81
CBX4-202ENST00000448310 GPR85P60893 370 aa26.36■■□□□ 1.81
CBX4-202ENST00000448310 PRAMEF9Q5VWM5 478 aa26.36■■□□□ 1.81
CBX4-202ENST00000448310 MDGA2Q7Z553 956 aa26.36■■□□□ 1.81
CBX4-202ENST00000448310 KRT78Q8N1N4 520 aa26.36■■□□□ 1.81
CBX4-202ENST00000448310 SREK1Q8WXA9 508 aaKnown RBP26.36■■□□□ 1.81
CBX4-202ENST00000448310 VMP1Q96GC9 406 aa26.36■■□□□ 1.81
CBX4-202ENST00000448310 CSF3RQ99062 836 aa26.36■■□□□ 1.81
CBX4-202ENST00000448310 DERL2Q9GZP9 239 aa26.36■■□□□ 1.81
CBX4-202ENST00000448310 LIN28AQ9H9Z2 209 aaKnown RBP26.36■■□□□ 1.81
CBX4-202ENST00000448310 NSMCE4AQ9NXX6 385 aa26.36■■□□□ 1.81
CBX4-202ENST00000448310 ZNF407Q9C0G0 2248 aa26.35■■□□□ 1.81
CBX4-202ENST00000448310 EML6Q6ZMW3 1958 aa26.35■■□□□ 1.81
CBX4-202ENST00000448310 MYOCOSA0A1B0GUC4 107 aa26.35■■□□□ 1.81
CBX4-202ENST00000448310 CXorf49A8MYA2 514 aaPredicted RBP26.35■■□□□ 1.81
CBX4-202ENST00000448310 PHGDHO43175 533 aaKnown RBP26.35■■□□□ 1.81
CBX4-202ENST00000448310 PEX1O43933 1283 aa26.35■■□□□ 1.81
CBX4-202ENST00000448310 HS6ST1O60243 411 aa26.35■■□□□ 1.81
CBX4-202ENST00000448310 CLEC3AO75596 197 aa26.35■■□□□ 1.81
CBX4-202ENST00000448310 CERS1P27544 350 aa26.35■■□□□ 1.81
CBX4-202ENST00000448310 KIR3DL1P43629 444 aa26.35■■□□□ 1.81
CBX4-202ENST00000448310 HSD17B7P56937 341 aa26.35■■□□□ 1.81
CBX4-202ENST00000448310 TERF2Q15554 542 aa26.35■■□□□ 1.81
CBX4-202ENST00000448310 ZNF295-AS1Q8N0V1 137 aa26.35■■□□□ 1.81
CBX4-202ENST00000448310 POGLUT1Q8NBL1 392 aa26.35■■□□□ 1.81
CBX4-202ENST00000448310 LURAP1Q96LR2 239 aa26.35■■□□□ 1.81
CBX4-202ENST00000448310 DMRTA2Q96SC8 542 aa26.35■■□□□ 1.81
CBX4-202ENST00000448310 KRT12Q99456 494 aa26.35■■□□□ 1.81
CBX4-202ENST00000448310 REXO4Q9GZR2 422 aaKnown RBP26.35■■□□□ 1.81
CBX4-202ENST00000448310 NT5DC2Q9H857 520 aa26.35■■□□□ 1.81
CBX4-202ENST00000448310 DNAJC11Q9NVH1 559 aa26.35■■□□□ 1.81
CBX4-202ENST00000448310 TACC2O95359 2948 aa26.35■■□□□ 1.81
CBX4-202ENST00000448310 A0A1B0GTH9 108 aa26.34■■□□□ 1.81
CBX4-202ENST00000448310 ANKDD1BA6NHY2 528 aa26.34■■□□□ 1.81
CBX4-202ENST00000448310 KLRC4-KLRK1H3BQV0 150 aa26.34■■□□□ 1.81
CBX4-202ENST00000448310 CCDC188H7C350 402 aa26.34■■□□□ 1.81
CBX4-202ENST00000448310 CLDN4O14493 209 aa26.34■■□□□ 1.81
CBX4-202ENST00000448310 CDC40O60508 579 aaKnown RBP eCLIP26.34■■□□□ 1.811e-7■■■■□ 23.9
CBX4-202ENST00000448310 SSTR1P30872 391 aa26.34■■□□□ 1.81
CBX4-202ENST00000448310 HSPA7P48741 367 aa26.34■■□□□ 1.81
CBX4-202ENST00000448310 GPR143P51810 404 aa26.34■■□□□ 1.81
CBX4-202ENST00000448310 POU4F1Q01851 419 aa26.34■■□□□ 1.81
CBX4-202ENST00000448310 SNX31Q8N9S9 440 aa26.34■■□□□ 1.81
CBX4-202ENST00000448310 OR2L5Q8NG80 312 aa26.34■■□□□ 1.81
CBX4-202ENST00000448310 NAPGQ99747 312 aaPredicted RBP26.34■■□□□ 1.81
CBX4-202ENST00000448310 GRPEL1Q9HAV7 217 aa26.34■■□□□ 1.81
CBX4-202ENST00000448310 GPRC5BQ9NZH0 403 aa26.34■■□□□ 1.81
CBX4-202ENST00000448310 PPT2Q9UMR5 302 aa26.34■■□□□ 1.81
CBX4-202ENST00000448310 PPIEQ9UNP9 301 aaKnown RBP26.34■■□□□ 1.81
CBX4-202ENST00000448310 E9PLN8 166 aa26.33■■□□□ 1.81
CBX4-202ENST00000448310 CCDC166P0CW27 439 aa26.33■■□□□ 1.81
CBX4-202ENST00000448310 POU3F2P20265 443 aaPredicted RBP26.33■■□□□ 1.81
CBX4-202ENST00000448310 OR4D1Q15615 310 aa26.33■■□□□ 1.81
CBX4-202ENST00000448310 ADPRMQ3LIE5 342 aa26.33■■□□□ 1.81
CBX4-202ENST00000448310 TRIM40Q6P9F5 258 aa26.33■■□□□ 1.81
CBX4-202ENST00000448310 GPSM1Q86YR5 675 aa26.33■■□□□ 1.81
CBX4-202ENST00000448310 PYROXD1Q8WU10 500 aa26.33■■□□□ 1.81
CBX4-202ENST00000448310 PHF10Q8WUB8 498 aaKnown RBP26.33■■□□□ 1.81
CBX4-202ENST00000448310 VKORC1Q9BQB6 163 aa26.33■■□□□ 1.81
CBX4-202ENST00000448310 CCDC77Q9BR77 488 aa26.33■■□□□ 1.81
CBX4-202ENST00000448310 CAPS2Q9BXY5 557 aa26.33■■□□□ 1.81
CBX4-202ENST00000448310 ADAP2Q9NPF8 381 aa26.33■■□□□ 1.81
CBX4-202ENST00000448310 KCMF1Q9P0J7 381 aa26.33■■□□□ 1.81
CBX4-202ENST00000448310 ZNF490Q9ULM2 529 aaPredicted RBP26.33■■□□□ 1.81
CBX4-202ENST00000448310 MRPS33Q9Y291 106 aaKnown RBP26.33■■□□□ 1.81
CBX4-202ENST00000448310 A0A088AWK7 358 aa26.32■■□□□ 1.8
CBX4-202ENST00000448310 CLGNO14967 610 aa26.32■■□□□ 1.8
CBX4-202ENST00000448310 TPOP07202 933 aa26.32■■□□□ 1.8
CBX4-202ENST00000448310 CD22P20273 847 aa26.32■■□□□ 1.8
CBX4-202ENST00000448310 ZNF10P21506 573 aaPredicted RBP26.32■■□□□ 1.8
CBX4-202ENST00000448310 GSTM2P28161 218 aa26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms