RNA–Protein interactions for RNA: ENST00000448038.2

SYNE1-213, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 6,001 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-213ENST00000448038 PDPRQ8NCN5 879 aa7.1□□□□□ -1.27
SYNE1-213ENST00000448038 LKAAEAR1Q8TD35 194 aa7.1□□□□□ -1.27
SYNE1-213ENST00000448038 MTERF3Q96E29 417 aa7.1□□□□□ -1.27
SYNE1-213ENST00000448038 HSH2DQ96JZ2 352 aa7.1□□□□□ -1.27
SYNE1-213ENST00000448038 CDADC1Q9BWV3 514 aa7.1□□□□□ -1.27
SYNE1-213ENST00000448038 BHLHE41Q9C0J9 482 aaPredicted RBP7.1□□□□□ -1.27
SYNE1-213ENST00000448038 ALKBH4Q9NXW9 302 aa7.1□□□□□ -1.27
SYNE1-213ENST00000448038 CPNE7Q9UBL6 633 aa7.1□□□□□ -1.27
SYNE1-213ENST00000448038 OAZ3Q9UMX2 235 aa7.1□□□□□ -1.27
SYNE1-213ENST00000448038 ZNFX1Q9P2E3 1918 aaKnown RBP7.1□□□□□ -1.27
SYNE1-213ENST00000448038 SMIM31A0A1B0GVY4 71 aa7.1□□□□□ -1.27
SYNE1-213ENST00000448038 SCAMP2O15127 329 aaKnown RBP7.1□□□□□ -1.27
SYNE1-213ENST00000448038 EEDO75530 441 aaKnown RBP7.1□□□□□ -1.27
SYNE1-213ENST00000448038 ZBTB11O95625 1053 aaPredicted RBP7.1□□□□□ -1.27
SYNE1-213ENST00000448038 F3P13726 295 aa7.1□□□□□ -1.27
SYNE1-213ENST00000448038 MAGP20916 626 aa7.1□□□□□ -1.27
SYNE1-213ENST00000448038 ITGA1P56199 1179 aa7.1□□□□□ -1.27
SYNE1-213ENST00000448038 ZNF33BQ06732 778 aa7.1□□□□□ -1.27
SYNE1-213ENST00000448038 HYAL1Q12794 435 aa7.1□□□□□ -1.27
SYNE1-213ENST00000448038 KIR2DS3Q14952 304 aa7.1□□□□□ -1.27
SYNE1-213ENST00000448038 TMEM52BQ4KMG9 183 aa7.1□□□□□ -1.27
SYNE1-213ENST00000448038 CYBRD1Q53TN4 286 aa7.1□□□□□ -1.27
SYNE1-213ENST00000448038 ATG9BQ674R7 924 aa7.1□□□□□ -1.27
SYNE1-213ENST00000448038 FAM109BQ6ICB4 259 aaPredicted RBP7.1□□□□□ -1.27
SYNE1-213ENST00000448038 OR52E8Q6IFG1 317 aa7.1□□□□□ -1.27
SYNE1-213ENST00000448038 LGI4Q8N135 537 aa7.1□□□□□ -1.27
SYNE1-213ENST00000448038 LRRC25Q8N386 305 aaPredicted RBP7.1□□□□□ -1.27
SYNE1-213ENST00000448038 OR4C6Q8NH72 309 aa7.1□□□□□ -1.27
SYNE1-213ENST00000448038 C16orf78Q8WTQ4 265 aa7.1□□□□□ -1.27
SYNE1-213ENST00000448038 RIT1Q92963 219 aa7.1□□□□□ -1.27
SYNE1-213ENST00000448038 DEPDC7Q96QD5 511 aa7.1□□□□□ -1.27
SYNE1-213ENST00000448038 UHRF1Q96T88 793 aaPredicted RBP7.1□□□□□ -1.27
SYNE1-213ENST00000448038 SORT1Q99523 831 aa7.1□□□□□ -1.27
SYNE1-213ENST00000448038 FAM192AQ9GZU8 254 aa7.1□□□□□ -1.27
SYNE1-213ENST00000448038 PPP6CO00743 305 aa7.1□□□□□ -1.27
SYNE1-213ENST00000448038 BCAT2O15382 392 aaPredicted RBP7.1□□□□□ -1.27
SYNE1-213ENST00000448038 ARHGEF15O94989 841 aa7.1□□□□□ -1.27
SYNE1-213ENST00000448038 OLR1P78380 273 aa7.1□□□□□ -1.27
SYNE1-213ENST00000448038 CTC1Q2NKJ3 1217 aa7.1□□□□□ -1.27
SYNE1-213ENST00000448038 CRB2Q5IJ48 1285 aa7.1□□□□□ -1.27
SYNE1-213ENST00000448038 TCTE1Q5JU00 501 aa7.1□□□□□ -1.27
SYNE1-213ENST00000448038 ZC3H14Q6PJT7 736 aaKnown RBP7.1□□□□□ -1.27
SYNE1-213ENST00000448038 RBM12BQ8IXT5 1001 aaKnown RBP7.1□□□□□ -1.27
SYNE1-213ENST00000448038 PARP8Q8N3A8 854 aa7.1□□□□□ -1.27
SYNE1-213ENST00000448038 NUP43Q8NFH3 380 aa7.1□□□□□ -1.27
SYNE1-213ENST00000448038 ZNF671Q8TAW3 534 aa7.1□□□□□ -1.27
SYNE1-213ENST00000448038 PHOSPHO1Q8TCT1 267 aa7.1□□□□□ -1.27
SYNE1-213ENST00000448038 FGF14Q92915 247 aa7.1□□□□□ -1.27
SYNE1-213ENST00000448038 TMBIM1Q969X1 311 aa7.1□□□□□ -1.27
SYNE1-213ENST00000448038 PRR11Q96HE9 360 aaPredicted RBP7.1□□□□□ -1.27
SYNE1-213ENST00000448038 MPP4Q96JB8 637 aa7.1□□□□□ -1.27
SYNE1-213ENST00000448038 UBXN10Q96LJ8 280 aa7.1□□□□□ -1.27
SYNE1-213ENST00000448038 NUAK2Q9H093 628 aa7.1□□□□□ -1.27
SYNE1-213ENST00000448038 EPB41L1Q9H4G0 881 aa7.1□□□□□ -1.27
SYNE1-213ENST00000448038 TBC1D17Q9HA65 648 aa7.1□□□□□ -1.27
SYNE1-213ENST00000448038 OR6C2Q9NZP2 312 aa7.1□□□□□ -1.27
SYNE1-213ENST00000448038 KLRF1Q9NZS2 232 aa7.1□□□□□ -1.27
SYNE1-213ENST00000448038 DIRAS1O95057 198 aa7.09□□□□□ -1.27
SYNE1-213ENST00000448038 FADS2O95864 444 aaKnown RBP7.09□□□□□ -1.27
SYNE1-213ENST00000448038 OR12D1P0DN82 309 aa7.09□□□□□ -1.27
SYNE1-213ENST00000448038 CR2P20023 1033 aa7.09□□□□□ -1.27
SYNE1-213ENST00000448038 CXCR1P25024 350 aa7.09□□□□□ -1.27
SYNE1-213ENST00000448038 CAPGP40121 348 aa7.09□□□□□ -1.27
SYNE1-213ENST00000448038 SIM1P81133 766 aaPredicted RBP7.09□□□□□ -1.27
SYNE1-213ENST00000448038 DAG1Q14118 895 aa7.09□□□□□ -1.27
SYNE1-213ENST00000448038 C1orf189Q5VU69 101 aa7.09□□□□□ -1.27
SYNE1-213ENST00000448038 FGD2Q7Z6J4 655 aa7.09□□□□□ -1.27
SYNE1-213ENST00000448038 OR4N5Q8IXE1 308 aa7.09□□□□□ -1.27
SYNE1-213ENST00000448038 RNF168Q8IYW5 571 aaPredicted RBP7.09□□□□□ -1.27
SYNE1-213ENST00000448038 CACTIN-AS1Q8N1I8 211 aa7.09□□□□□ -1.27
SYNE1-213ENST00000448038 NTMT1Q9BV86 223 aa7.09□□□□□ -1.27
SYNE1-213ENST00000448038 IFT27Q9BW83 186 aa7.09□□□□□ -1.27
SYNE1-213ENST00000448038 TAAR2Q9P1P5 351 aa7.09□□□□□ -1.27
SYNE1-213ENST00000448038 PRODH2Q9UF12 536 aa7.09□□□□□ -1.27
SYNE1-213ENST00000448038 PDLIM1O00151 329 aa7.09□□□□□ -1.27
SYNE1-213ENST00000448038 EMC8O43402 210 aa7.09□□□□□ -1.27
SYNE1-213ENST00000448038 MPZL2O60487 215 aa7.09□□□□□ -1.27
SYNE1-213ENST00000448038 FHP07954 510 aa7.09□□□□□ -1.27
SYNE1-213ENST00000448038 LHCGRP22888 699 aa7.09□□□□□ -1.27
SYNE1-213ENST00000448038 ADARP55265 1226 aaKnown RBP7.09□□□□□ -1.27
SYNE1-213ENST00000448038 POU6F2P78424 691 aaPredicted RBP7.09□□□□□ -1.27
SYNE1-213ENST00000448038 ADAMTSL4Q6UY14 1074 aa7.09□□□□□ -1.27
SYNE1-213ENST00000448038 USP30Q70CQ3 517 aa7.09□□□□□ -1.27
SYNE1-213ENST00000448038 NUP54Q7Z3B4 507 aa7.09□□□□□ -1.27
SYNE1-213ENST00000448038 C12orf40Q86WS4 652 aa7.09□□□□□ -1.27
SYNE1-213ENST00000448038 ZZZ3Q8IYH5 903 aa7.09□□□□□ -1.27
SYNE1-213ENST00000448038 PEX11GQ96HA9 241 aa7.09□□□□□ -1.27
SYNE1-213ENST00000448038 FCRL4Q96PJ5 515 aa7.09□□□□□ -1.27
SYNE1-213ENST00000448038 INSM2Q96T92 566 aaPredicted RBP7.09□□□□□ -1.27
SYNE1-213ENST00000448038 TMEM168Q9H0V1 697 aa7.09□□□□□ -1.27
SYNE1-213ENST00000448038 SERHL2Q9H4I8 314 aa7.09□□□□□ -1.27
SYNE1-213ENST00000448038 BRF2Q9HAW0 419 aa7.09□□□□□ -1.27
SYNE1-213ENST00000448038 SERHLQ9NQF3 203 aa7.09□□□□□ -1.27
SYNE1-213ENST00000448038 TVP23BQ9NYZ1 205 aa7.09□□□□□ -1.27
SYNE1-213ENST00000448038 WBP11Q9Y2W2 641 aaKnown RBP7.09□□□□□ -1.27
SYNE1-213ENST00000448038 FOCADQ5VW36 1801 aa7.09□□□□□ -1.27
SYNE1-213ENST00000448038 A0A0J9YY10 115 aa7.09□□□□□ -1.27
SYNE1-213ENST00000448038 EME2A4GXA9 379 aaPredicted RBP7.09□□□□□ -1.27
SYNE1-213ENST00000448038 KHNYNO15037 678 aaKnown RBP7.09□□□□□ -1.27
SYNE1-213ENST00000448038 RGS10O43665 173 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms