RNA–Protein interactions for RNA: ENST00000447376.1

SF3A1-204, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 418 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-204ENST00000447376 ACTL7BQ9Y614 415 aa15.44■□□□□ 0.06
SF3A1-204ENST00000447376 KALRNO60229 2985 aa15.44■□□□□ 0.06
SF3A1-204ENST00000447376 NUP210LQ5VU65 1888 aa15.44■□□□□ 0.06
SF3A1-204ENST00000447376 SCN3AQ9NY46 2000 aa15.43■□□□□ 0.06
SF3A1-204ENST00000447376 SMG1Q96Q15 3661 aaKnown RBP15.43■□□□□ 0.06
SF3A1-204ENST00000447376 LOC102723996A0A087X1L8 192 aa15.43■□□□□ 0.06
SF3A1-204ENST00000447376 A0A0G2JN53 185 aa15.43■□□□□ 0.06
SF3A1-204ENST00000447376 MAGEB17A8MXT2 336 aa15.43■□□□□ 0.06
SF3A1-204ENST00000447376 SUV39H1O43463 412 aa15.43■□□□□ 0.06
SF3A1-204ENST00000447376 PRMT3O60678 531 aa15.43■□□□□ 0.06
SF3A1-204ENST00000447376 B4GALT2O60909 372 aa15.43■□□□□ 0.06
SF3A1-204ENST00000447376 SPAG7O75391 227 aa15.43■□□□□ 0.06
SF3A1-204ENST00000447376 B3GALT4O96024 378 aa15.43■□□□□ 0.06
SF3A1-204ENST00000447376 COX6A1P12074 109 aa15.43■□□□□ 0.06
SF3A1-204ENST00000447376 CASRP41180 1078 aa15.43■□□□□ 0.06
SF3A1-204ENST00000447376 SSR2P43308 183 aa15.43■□□□□ 0.06
SF3A1-204ENST00000447376 OR4D2P58180 307 aa15.43■□□□□ 0.06
SF3A1-204ENST00000447376 SNRPNP63162 240 aaKnown RBP15.43■□□□□ 0.06
SF3A1-204ENST00000447376 IFT88Q13099 833 aa15.43■□□□□ 0.06
SF3A1-204ENST00000447376 CPSF6Q16630 551 aaKnown RBP eCLIP15.43■□□□□ 0.06
SF3A1-204ENST00000447376 CFAP157Q5JU67 520 aa15.43■□□□□ 0.06
SF3A1-204ENST00000447376 ZNF678Q5SXM1 525 aa15.43■□□□□ 0.06
SF3A1-204ENST00000447376 C10orf62Q5T681 223 aaPredicted RBP15.43■□□□□ 0.06
SF3A1-204ENST00000447376 JMJD6Q6NYC1 403 aaPredicted RBP15.43■□□□□ 0.06
SF3A1-204ENST00000447376 HDXQ7Z353 690 aa15.43■□□□□ 0.06
SF3A1-204ENST00000447376 CA13Q8N1Q1 262 aa15.43■□□□□ 0.06
SF3A1-204ENST00000447376 ZNF483Q8TF39 744 aaPredicted RBP15.43■□□□□ 0.06
SF3A1-204ENST00000447376 ZNF473Q8WTR7 871 aaKnown RBP15.43■□□□□ 0.06
SF3A1-204ENST00000447376 L3HYPDHQ96EM0 354 aa15.43■□□□□ 0.06
SF3A1-204ENST00000447376 PTCHD1Q96NR3 888 aa15.43■□□□□ 0.06
SF3A1-204ENST00000447376 F2RL3Q96RI0 385 aa15.43■□□□□ 0.06
SF3A1-204ENST00000447376 LPAR4Q99677 370 aa15.43■□□□□ 0.06
SF3A1-204ENST00000447376 ZNF700Q9H0M5 742 aa15.43■□□□□ 0.06
SF3A1-204ENST00000447376 SSU72Q9NP77 194 aaKnown RBP15.43■□□□□ 0.06
SF3A1-204ENST00000447376 SEMA4BQ9NPR2 832 aaPredicted RBP15.43■□□□□ 0.06
SF3A1-204ENST00000447376 TEKT2Q9UIF3 430 aa15.43■□□□□ 0.06
SF3A1-204ENST00000447376 TSC22D4Q9Y3Q8 395 aa15.43■□□□□ 0.06
SF3A1-204ENST00000447376 COL6A6A6NMZ7 2263 aa15.43■□□□□ 0.06
SF3A1-204ENST00000447376 A0A1W2PQ72 361 aa15.42■□□□□ 0.06
SF3A1-204ENST00000447376 G3V2L1 256 aa15.42■□□□□ 0.06
SF3A1-204ENST00000447376 H0YIV9 168 aa15.42■□□□□ 0.06
SF3A1-204ENST00000447376 PRAMEF4O60810 478 aa15.42■□□□□ 0.06
SF3A1-204ENST00000447376 MLYCDO95822 493 aa15.42■□□□□ 0.06
SF3A1-204ENST00000447376 TGFB1P01137 390 aa15.42■□□□□ 0.06
SF3A1-204ENST00000447376 SERPINA7P05543 415 aa15.42■□□□□ 0.06
SF3A1-204ENST00000447376 H2AFXP16104 143 aaPredicted RBP15.42■□□□□ 0.06
SF3A1-204ENST00000447376 PTX3P26022 381 aaPredicted RBP15.42■□□□□ 0.06
SF3A1-204ENST00000447376 TSFMP43897 325 aaKnown RBP15.42■□□□□ 0.06
SF3A1-204ENST00000447376 RAB38P57729 211 aa15.42■□□□□ 0.06
SF3A1-204ENST00000447376 DNAJB13P59910 316 aa15.42■□□□□ 0.06
SF3A1-204ENST00000447376 CLCQ05315 142 aa15.42■□□□□ 0.06
SF3A1-204ENST00000447376 EXT1Q16394 746 aa15.42■□□□□ 0.06
SF3A1-204ENST00000447376 PRAMEF9Q5VWM5 478 aa15.42■□□□□ 0.06
SF3A1-204ENST00000447376 KHDRBS2Q5VWX1 349 aaKnown RBP15.42■□□□□ 0.06
SF3A1-204ENST00000447376 ABHD17CQ6PCB6 329 aa15.42■□□□□ 0.06
SF3A1-204ENST00000447376 QSOX2Q6ZRP7 698 aa15.42■□□□□ 0.06
SF3A1-204ENST00000447376 MILR1Q7Z6M3 343 aa15.42■□□□□ 0.06
SF3A1-204ENST00000447376 ANKRD37Q7Z713 158 aa15.42■□□□□ 0.06
SF3A1-204ENST00000447376 TMEM151BQ8IW70 566 aa15.42■□□□□ 0.06
SF3A1-204ENST00000447376 L3MBTL4Q8NA19 623 aa15.42■□□□□ 0.06
SF3A1-204ENST00000447376 PLPP5Q8NEB5 264 aa15.42■□□□□ 0.06
SF3A1-204ENST00000447376 C7orf57Q8NEG2 295 aa15.42■□□□□ 0.06
SF3A1-204ENST00000447376 HUS1BQ8NHY5 278 aa15.42■□□□□ 0.06
SF3A1-204ENST00000447376 TCP10LQ8TDR4 215 aa15.42■□□□□ 0.06
SF3A1-204ENST00000447376 RGMAQ96B86 450 aa15.42■□□□□ 0.06
SF3A1-204ENST00000447376 TMEM237Q96Q45 408 aa15.42■□□□□ 0.06
SF3A1-204ENST00000447376 MTERF1Q99551 399 aaKnown RBP15.42■□□□□ 0.06
SF3A1-204ENST00000447376 NTMT1Q9BV86 223 aa15.42■□□□□ 0.06
SF3A1-204ENST00000447376 MS4A8Q9BY19 250 aa15.42■□□□□ 0.06
SF3A1-204ENST00000447376 ZNF552Q9H707 407 aaPredicted RBP15.42■□□□□ 0.06
SF3A1-204ENST00000447376 SLAMF7Q9NQ25 335 aa15.42■□□□□ 0.06
SF3A1-204ENST00000447376 PRDM9Q9NQV7 894 aa15.42■□□□□ 0.06
SF3A1-204ENST00000447376 OXSMQ9NWU1 459 aa15.42■□□□□ 0.06
SF3A1-204ENST00000447376 MMACHCQ9Y4U1 282 aa15.42■□□□□ 0.06
SF3A1-204ENST00000447376 H3BQF6 201 aa15.41■□□□□ 0.06
SF3A1-204ENST00000447376 OR7A17O14581 309 aa15.41■□□□□ 0.06
SF3A1-204ENST00000447376 PRR35P0CG20 571 aa15.41■□□□□ 0.06
SF3A1-204ENST00000447376 ARFIP1P53367 373 aa15.41■□□□□ 0.06
SF3A1-204ENST00000447376 RHAGQ02094 409 aa15.41■□□□□ 0.06
SF3A1-204ENST00000447376 PCOLCEQ15113 449 aa15.41■□□□□ 0.06
SF3A1-204ENST00000447376 ZRSR2Q15696 482 aaKnown RBP15.41■□□□□ 0.06
SF3A1-204ENST00000447376 BTBD16Q32M84 506 aa15.41■□□□□ 0.06
SF3A1-204ENST00000447376 SFT2D3Q587I9 215 aa15.41■□□□□ 0.06
SF3A1-204ENST00000447376 CRB2Q5IJ48 1285 aa15.41■□□□□ 0.06
SF3A1-204ENST00000447376 LIPMQ5VYY2 423 aa15.41■□□□□ 0.06
SF3A1-204ENST00000447376 LANCL3Q6ZV70 420 aa15.41■□□□□ 0.06
SF3A1-204ENST00000447376 VN1R5Q7Z5H4 357 aa15.41■□□□□ 0.06
SF3A1-204ENST00000447376 EXOC3L1Q86VI1 746 aa15.41■□□□□ 0.06
SF3A1-204ENST00000447376 CCNYL1Q8N7R7 359 aa15.41■□□□□ 0.06
SF3A1-204ENST00000447376 GOLGA6L1Q8N7Z2 621 aa15.41■□□□□ 0.06
SF3A1-204ENST00000447376 FAM111AQ96PZ2 611 aa15.41■□□□□ 0.06
SF3A1-204ENST00000447376 ELOVL6Q9H5J4 265 aa15.41■□□□□ 0.06
SF3A1-204ENST00000447376 LANCL2Q9NS86 450 aa15.41■□□□□ 0.06
SF3A1-204ENST00000447376 RNF11Q9Y3C5 154 aa15.41■□□□□ 0.06
SF3A1-204ENST00000447376 BLACEA4D250 179 aa15.4■□□□□ 0.06
SF3A1-204ENST00000447376 J3QKU1 62 aa15.4■□□□□ 0.06
SF3A1-204ENST00000447376 K7EM74 188 aa15.4■□□□□ 0.06
SF3A1-204ENST00000447376 MASP2O00187 686 aa15.4■□□□□ 0.06
SF3A1-204ENST00000447376 TM9SF1O15321 606 aa15.4■□□□□ 0.06
SF3A1-204ENST00000447376 TYROBPO43914 113 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms