RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 C11orf24Q96F05 449 aaPredicted RBP17.03■□□□□ 0.32
TRAPPC4-203ENST00000447216 MAELQ96JY0 434 aaKnown RBP17.03■□□□□ 0.32
TRAPPC4-203ENST00000447216 SERINC2Q96SA4 455 aa17.03■□□□□ 0.32
TRAPPC4-203ENST00000447216 SPRY4Q9C004 299 aa17.03■□□□□ 0.32
TRAPPC4-203ENST00000447216 NSRP1Q9H0G5 558 aaKnown RBP17.03■□□□□ 0.32
TRAPPC4-203ENST00000447216 EPN3Q9H201 632 aa17.03■□□□□ 0.32
TRAPPC4-203ENST00000447216 ZNF304Q9HCX3 659 aa17.03■□□□□ 0.32
TRAPPC4-203ENST00000447216 SLC22A11Q9NSA0 550 aa17.03■□□□□ 0.32
TRAPPC4-203ENST00000447216 G3BP2Q9UN86 482 aaKnown RBP17.03■□□□□ 0.32
TRAPPC4-203ENST00000447216 A0A088AWK7 358 aa17.02■□□□□ 0.32
TRAPPC4-203ENST00000447216 CDRT15L2A8MXV6 281 aa17.02■□□□□ 0.32
TRAPPC4-203ENST00000447216 MEN1O00255 615 aa17.02■□□□□ 0.32
TRAPPC4-203ENST00000447216 CHST10O43529 356 aa17.02■□□□□ 0.32
TRAPPC4-203ENST00000447216 SCELO95171 688 aa17.02■□□□□ 0.32
TRAPPC4-203ENST00000447216 LBPP18428 481 aa17.02■□□□□ 0.32
TRAPPC4-203ENST00000447216 ZNF10P21506 573 aaPredicted RBP17.02■□□□□ 0.32
TRAPPC4-203ENST00000447216 ARFIP1P53367 373 aa17.02■□□□□ 0.32
TRAPPC4-203ENST00000447216 HNRNPH2P55795 449 aaKnown RBP17.02■□□□□ 0.32
TRAPPC4-203ENST00000447216 RTP5Q14D33 572 aa17.02■□□□□ 0.32
TRAPPC4-203ENST00000447216 LSM12Q3MHD2 195 aaKnown RBP17.02■□□□□ 0.32
TRAPPC4-203ENST00000447216 TUBB8Q3ZCM7 444 aa17.02■□□□□ 0.32
TRAPPC4-203ENST00000447216 TMEM198Q66K66 360 aa17.02■□□□□ 0.32
TRAPPC4-203ENST00000447216 NOXRED1Q6NXP6 359 aa17.02■□□□□ 0.32
TRAPPC4-203ENST00000447216 PRMT9Q6P2P2 845 aa17.02■□□□□ 0.32
TRAPPC4-203ENST00000447216 FAM199XQ6PEV8 388 aaPredicted RBP17.02■□□□□ 0.32
TRAPPC4-203ENST00000447216 CYP20A1Q6UW02 462 aa17.02■□□□□ 0.32
TRAPPC4-203ENST00000447216 COX15Q7KZN9 410 aa17.02■□□□□ 0.32
TRAPPC4-203ENST00000447216 CA13Q8N1Q1 262 aa17.02■□□□□ 0.32
TRAPPC4-203ENST00000447216 CDC26Q8NHZ8 85 aa17.02■□□□□ 0.32
TRAPPC4-203ENST00000447216 PROKR1Q8TCW9 393 aa17.02■□□□□ 0.32
TRAPPC4-203ENST00000447216 ACTRT2Q8TDY3 377 aa17.02■□□□□ 0.32
TRAPPC4-203ENST00000447216 MR1Q95460 341 aa17.02■□□□□ 0.32
TRAPPC4-203ENST00000447216 COL26A1Q96A83 441 aa17.02■□□□□ 0.32
TRAPPC4-203ENST00000447216 MVB12AQ96EY5 273 aa17.02■□□□□ 0.32
TRAPPC4-203ENST00000447216 MARK4Q96L34 752 aa17.02■□□□□ 0.32
TRAPPC4-203ENST00000447216 FCRL1Q96LA6 429 aa17.02■□□□□ 0.32
TRAPPC4-203ENST00000447216 MAPKAP1Q9BPZ7 522 aa17.02■□□□□ 0.32
TRAPPC4-203ENST00000447216 YIPF2Q9BWQ6 316 aa17.02■□□□□ 0.32
TRAPPC4-203ENST00000447216 ROGDIQ9GZN7 287 aa17.02■□□□□ 0.32
TRAPPC4-203ENST00000447216 TCF7L2Q9NQB0 619 aa17.02■□□□□ 0.32
TRAPPC4-203ENST00000447216 KLHL14Q9P2G3 628 aa17.02■□□□□ 0.32
TRAPPC4-203ENST00000447216 MCM8Q9UJA3 840 aa17.02■□□□□ 0.32
TRAPPC4-203ENST00000447216 ADAM29Q9UKF5 820 aa17.02■□□□□ 0.32
TRAPPC4-203ENST00000447216 FBXW2Q9UKT8 454 aa17.02■□□□□ 0.32
TRAPPC4-203ENST00000447216 CDC14AQ9UNH5 594 aa17.02■□□□□ 0.32
TRAPPC4-203ENST00000447216 GNG14A0A1W2PPG7 69 aa17.01■□□□□ 0.31
TRAPPC4-203ENST00000447216 ARHGAP10A1A4S6 786 aa17.01■□□□□ 0.31
TRAPPC4-203ENST00000447216 E9PBE3 544 aa17.01■□□□□ 0.31
TRAPPC4-203ENST00000447216 H0YIG0 161 aa17.01■□□□□ 0.31
TRAPPC4-203ENST00000447216 KLHL41O60662 606 aa17.01■□□□□ 0.31
TRAPPC4-203ENST00000447216 MYO1DO94832 1006 aa17.01■□□□□ 0.31
TRAPPC4-203ENST00000447216 ANXA4P09525 319 aaPredicted RBP17.01■□□□□ 0.31
TRAPPC4-203ENST00000447216 ALDOCP09972 364 aaKnown RBP17.01■□□□□ 0.31
TRAPPC4-203ENST00000447216 ARFIP2P53365 341 aa17.01■□□□□ 0.31
TRAPPC4-203ENST00000447216 MAPK12P53778 367 aa17.01■□□□□ 0.31
TRAPPC4-203ENST00000447216 ERVK-8P63133 956 aa17.01■□□□□ 0.31
TRAPPC4-203ENST00000447216 SKP1P63208 163 aa17.01■□□□□ 0.31
TRAPPC4-203ENST00000447216 DCDP81605 110 aaKnown RBP17.01■□□□□ 0.31
TRAPPC4-203ENST00000447216 ABHD18Q0P651 414 aa17.01■□□□□ 0.31
TRAPPC4-203ENST00000447216 NKAIN1Q4KMZ8 207 aa17.01■□□□□ 0.31
TRAPPC4-203ENST00000447216 IL23RQ5VWK5 629 aa17.01■□□□□ 0.31
TRAPPC4-203ENST00000447216 MRM1Q6IN84 353 aaKnown RBP17.01■□□□□ 0.31
TRAPPC4-203ENST00000447216 C6orf15Q6UXA7 325 aaPredicted RBP17.01■□□□□ 0.31
TRAPPC4-203ENST00000447216 SPATA21Q7Z572 469 aa17.01■□□□□ 0.31
TRAPPC4-203ENST00000447216 ZCCHC7Q8N3Z6 543 aaKnown RBP17.01■□□□□ 0.31
TRAPPC4-203ENST00000447216 EFCAB3Q8N7B9 438 aa17.01■□□□□ 0.31
TRAPPC4-203ENST00000447216 CLHC1Q8NHS4 586 aa17.01■□□□□ 0.31
TRAPPC4-203ENST00000447216 C10orf82Q8WW14 230 aa17.01■□□□□ 0.31
TRAPPC4-203ENST00000447216 NXPE2Q96DL1 559 aa17.01■□□□□ 0.31
TRAPPC4-203ENST00000447216 SLC45A3Q96JT2 553 aa17.01■□□□□ 0.31
TRAPPC4-203ENST00000447216 RBCK1Q9BYM8 510 aa17.01■□□□□ 0.31
TRAPPC4-203ENST00000447216 B3GNT4Q9C0J1 378 aa17.01■□□□□ 0.31
TRAPPC4-203ENST00000447216 CHST8Q9H2A9 424 aa17.01■□□□□ 0.31
TRAPPC4-203ENST00000447216 SIRT5Q9NXA8 310 aa17.01■□□□□ 0.31
TRAPPC4-203ENST00000447216 BAIAP2L1Q9UHR4 511 aa17.01■□□□□ 0.31
TRAPPC4-203ENST00000447216 NEUROG3Q9Y4Z2 214 aa17.01■□□□□ 0.31
TRAPPC4-203ENST00000447216 PCDHGA7Q9Y5G6 932 aa17.01■□□□□ 0.31
TRAPPC4-203ENST00000447216 FAM58BPP0C7Q3 252 aa17■□□□□ 0.31
TRAPPC4-203ENST00000447216 BCKDHAP12694 445 aa17■□□□□ 0.31
TRAPPC4-203ENST00000447216 SDC1P18827 310 aa17■□□□□ 0.31
TRAPPC4-203ENST00000447216 TACR1P25103 407 aa17■□□□□ 0.31
TRAPPC4-203ENST00000447216 TSFMP43897 325 aaKnown RBP17■□□□□ 0.31
TRAPPC4-203ENST00000447216 DIO3P55073 304 aa17■□□□□ 0.31
TRAPPC4-203ENST00000447216 LIM2P55344 173 aa17■□□□□ 0.31
TRAPPC4-203ENST00000447216 SHC2P98077 582 aa17■□□□□ 0.31
TRAPPC4-203ENST00000447216 EMX2Q04743 252 aa17■□□□□ 0.31
TRAPPC4-203ENST00000447216 DSG2Q14126 1118 aa17■□□□□ 0.31
TRAPPC4-203ENST00000447216 GALNT18Q6P9A2 607 aa17■□□□□ 0.31
TRAPPC4-203ENST00000447216 IGF2-ASQ6U949 168 aa17■□□□□ 0.31
TRAPPC4-203ENST00000447216 MMP21Q8N119 569 aa17■□□□□ 0.31
TRAPPC4-203ENST00000447216 LIX1Q8N485 282 aa17■□□□□ 0.31
TRAPPC4-203ENST00000447216 CEP70Q8NHQ1 597 aa17■□□□□ 0.31
TRAPPC4-203ENST00000447216 C16orf78Q8WTQ4 265 aa17■□□□□ 0.31
TRAPPC4-203ENST00000447216 PEX11GQ96HA9 241 aa17■□□□□ 0.31
TRAPPC4-203ENST00000447216 METTL2AQ96IZ6 378 aaKnown RBP17■□□□□ 0.31
TRAPPC4-203ENST00000447216 RILPQ96NA2 401 aa17■□□□□ 0.31
TRAPPC4-203ENST00000447216 LRFN5Q96NI6 719 aa17■□□□□ 0.31
TRAPPC4-203ENST00000447216 CCT8L2Q96SF2 557 aa17■□□□□ 0.31
TRAPPC4-203ENST00000447216 CSF3RQ99062 836 aa17■□□□□ 0.31
TRAPPC4-203ENST00000447216 SIKE1Q9BRV8 207 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms