RNA–Protein interactions for RNA: ENST00000443660.5

MRPL40-202, Transcript of mitochondrial ribosomal protein L40, humanhuman

TSL 2

Gene MRPL40, Length 954 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-202ENST00000443660 XKR6Q5GH73 641 aa13.78□□□□□ -0.2
MRPL40-202ENST00000443660 SEL1L2Q5TEA6 688 aa13.78□□□□□ -0.2
MRPL40-202ENST00000443660 ZNF470Q6ECI4 717 aa13.78□□□□□ -0.2
MRPL40-202ENST00000443660 CASC4Q6P4E1 433 aa13.78□□□□□ -0.2
MRPL40-202ENST00000443660 C16orf47Q6ZP98 133 aaPredicted RBP13.78□□□□□ -0.2
MRPL40-202ENST00000443660 RTL4Q6ZR62 310 aa13.78□□□□□ -0.2
MRPL40-202ENST00000443660 FAM47EQ6ZV65 393 aa13.78□□□□□ -0.2
MRPL40-202ENST00000443660 STRA8Q7Z7C7 330 aa13.78□□□□□ -0.2
MRPL40-202ENST00000443660 LRRN4CLQ8ND94 238 aa13.78□□□□□ -0.2
MRPL40-202ENST00000443660 ABHD11Q8NFV4 315 aa13.78□□□□□ -0.2
MRPL40-202ENST00000443660 OR4K1Q8NGD4 311 aa13.78□□□□□ -0.2
MRPL40-202ENST00000443660 SLCO2A1Q92959 643 aa13.78□□□□□ -0.2
MRPL40-202ENST00000443660 RNASE6Q93091 150 aaKnown RBP13.78□□□□□ -0.2
MRPL40-202ENST00000443660 SNF8Q96H20 258 aa13.78□□□□□ -0.2
MRPL40-202ENST00000443660 PDLIM2Q96JY6 352 aa13.78□□□□□ -0.2
MRPL40-202ENST00000443660 LIN28AQ9H9Z2 209 aaKnown RBP13.78□□□□□ -0.2
MRPL40-202ENST00000443660 MYOTQ9UBF9 498 aa13.78□□□□□ -0.2
MRPL40-202ENST00000443660 ZFP69BQ9UJL9 534 aa13.78□□□□□ -0.2
MRPL40-202ENST00000443660 FOXD3Q9UJU5 478 aaPredicted RBP13.78□□□□□ -0.2
MRPL40-202ENST00000443660 PPIEQ9UNP9 301 aaKnown RBP13.78□□□□□ -0.2
MRPL40-202ENST00000443660 PDE10AQ9Y233 779 aa13.78□□□□□ -0.2
MRPL40-202ENST00000443660 LIPGQ9Y5X9 500 aa13.78□□□□□ -0.2
MRPL40-202ENST00000443660 COMMD10Q9Y6G5 202 aa13.78□□□□□ -0.2
MRPL40-202ENST00000443660 SCN3AQ9NY46 2000 aa13.78□□□□□ -0.2
MRPL40-202ENST00000443660 PABPN1LA6NDY0 278 aaKnown RBP13.77□□□□□ -0.21
MRPL40-202ENST00000443660 CLDN4O14493 209 aa13.77□□□□□ -0.21
MRPL40-202ENST00000443660 HCN1O60741 890 aa13.77□□□□□ -0.21
MRPL40-202ENST00000443660 AHRP35869 848 aa13.77□□□□□ -0.21
MRPL40-202ENST00000443660 ASCL1P50553 236 aa13.77□□□□□ -0.21
MRPL40-202ENST00000443660 NKX6-1P78426 367 aaPredicted RBP13.77□□□□□ -0.21
MRPL40-202ENST00000443660 SARNPP82979 210 aaKnown RBP13.77□□□□□ -0.21
MRPL40-202ENST00000443660 CDK16Q00536 496 aa13.77□□□□□ -0.21
MRPL40-202ENST00000443660 AKAP6Q13023 2319 aa13.77□□□□□ -0.21
MRPL40-202ENST00000443660 CSHL1Q14406 222 aa13.77□□□□□ -0.21
MRPL40-202ENST00000443660 SHEQ5VZ18 495 aa13.77□□□□□ -0.21
MRPL40-202ENST00000443660 UGT3A1Q6NUS8 523 aa13.77□□□□□ -0.21
MRPL40-202ENST00000443660 GSTA5Q7RTV2 222 aa13.77□□□□□ -0.21
MRPL40-202ENST00000443660 KIAA1328Q86T90 577 aa13.77□□□□□ -0.21
MRPL40-202ENST00000443660 PRIMA1Q86XR5 153 aa13.77□□□□□ -0.21
MRPL40-202ENST00000443660 TRPV3Q8NET8 790 aa13.77□□□□□ -0.21
MRPL40-202ENST00000443660 SPATA3Q8NHX4 192 aa13.77□□□□□ -0.21
MRPL40-202ENST00000443660 CD200R1Q8TD46 325 aa13.77□□□□□ -0.21
MRPL40-202ENST00000443660 CNPPD1Q9BV87 410 aa13.77□□□□□ -0.21
MRPL40-202ENST00000443660 FBXO6Q9NRD1 293 aaPredicted RBP13.77□□□□□ -0.21
MRPL40-202ENST00000443660 SACM1LQ9NTJ5 587 aa13.77□□□□□ -0.21
MRPL40-202ENST00000443660 MTRF1LQ9UGC7 380 aaKnown RBP13.77□□□□□ -0.21
MRPL40-202ENST00000443660 ZNF223Q9UK11 482 aaPredicted RBP13.77□□□□□ -0.21
MRPL40-202ENST00000443660 ADAMTS6Q9UKP5 1117 aa13.77□□□□□ -0.21
MRPL40-202ENST00000443660 MED16Q9Y2X0 877 aa13.77□□□□□ -0.21
MRPL40-202ENST00000443660 TRGV5A0A0B4J1U4 118 aa13.76□□□□□ -0.21
MRPL40-202ENST00000443660 A0A0G2JMM0 328 aa13.76□□□□□ -0.21
MRPL40-202ENST00000443660 A0A1W2PPB8 328 aa13.76□□□□□ -0.21
MRPL40-202ENST00000443660 A0A1W2PRS3 328 aa13.76□□□□□ -0.21
MRPL40-202ENST00000443660 MAGEB16A2A368 324 aa13.76□□□□□ -0.21
MRPL40-202ENST00000443660 TUBAL3A6NHL2 446 aa13.76□□□□□ -0.21
MRPL40-202ENST00000443660 KIR3DP1A8MWS1 328 aa13.76□□□□□ -0.21
MRPL40-202ENST00000443660 KIAA1324LA8MWY0 1029 aaPredicted RBP13.76□□□□□ -0.21
MRPL40-202ENST00000443660 WWP2O00308 870 aa13.76□□□□□ -0.21
MRPL40-202ENST00000443660 ARHGEF9O43307 516 aa13.76□□□□□ -0.21
MRPL40-202ENST00000443660 P04436 131 aa13.76□□□□□ -0.21
MRPL40-202ENST00000443660 EPXP11678 715 aa13.76□□□□□ -0.21
MRPL40-202ENST00000443660 BMP5P22003 454 aa13.76□□□□□ -0.21
MRPL40-202ENST00000443660 SOX3P41225 446 aa13.76□□□□□ -0.21
MRPL40-202ENST00000443660 RGS4P49798 205 aa13.76□□□□□ -0.21
MRPL40-202ENST00000443660 GPR143P51810 404 aa13.76□□□□□ -0.21
MRPL40-202ENST00000443660 SLC13A2Q13183 592 aa13.76□□□□□ -0.21
MRPL40-202ENST00000443660 CTBP1Q13363 440 aa13.76□□□□□ -0.21
MRPL40-202ENST00000443660 DHX34Q14147 1143 aaKnown RBP13.76□□□□□ -0.21
MRPL40-202ENST00000443660 HYAL4Q2M3T9 481 aa13.76□□□□□ -0.21
MRPL40-202ENST00000443660 BBS9Q3SYG4 887 aa13.76□□□□□ -0.21
MRPL40-202ENST00000443660 ARMC3Q5W041 872 aa13.76□□□□□ -0.21
MRPL40-202ENST00000443660 ZNF549Q6P9A3 640 aa13.76□□□□□ -0.21
MRPL40-202ENST00000443660 HSDL2Q6YN16 418 aa13.76□□□□□ -0.21
MRPL40-202ENST00000443660 MBOAT1Q6ZNC8 495 aa13.76□□□□□ -0.21
MRPL40-202ENST00000443660 KIF18BQ86Y91 864 aa13.76□□□□□ -0.21
MRPL40-202ENST00000443660 SLC13A5Q86YT5 568 aaPredicted RBP13.76□□□□□ -0.21
MRPL40-202ENST00000443660 SPNS2Q8IVW8 549 aa13.76□□□□□ -0.21
MRPL40-202ENST00000443660 CA13Q8N1Q1 262 aa13.76□□□□□ -0.21
MRPL40-202ENST00000443660 TMEM132CQ8N3T6 1108 aa13.76□□□□□ -0.21
MRPL40-202ENST00000443660 GPATCH11Q8N954 259 aa13.76□□□□□ -0.21
MRPL40-202ENST00000443660 HES6Q96HZ4 224 aa13.76□□□□□ -0.21
MRPL40-202ENST00000443660 FAR2Q96K12 515 aa13.76□□□□□ -0.21
MRPL40-202ENST00000443660 SGCZQ96LD1 299 aa13.76□□□□□ -0.21
MRPL40-202ENST00000443660 RASL10BQ96S79 203 aa13.76□□□□□ -0.21
MRPL40-202ENST00000443660 PRTFDC1Q9NRG1 225 aa13.76□□□□□ -0.21
MRPL40-202ENST00000443660 TRMT6Q9UJA5 497 aaKnown RBP13.76□□□□□ -0.21
MRPL40-202ENST00000443660 CLCA3PQ9Y6N3 262 aa13.76□□□□□ -0.21
MRPL40-202ENST00000443660 PHF3Q92576 2039 aaKnown RBP13.75□□□□□ -0.21
MRPL40-202ENST00000443660 PRKNO60260 465 aaPredicted RBP13.75□□□□□ -0.21
MRPL40-202ENST00000443660 LY6G6DO95868 133 aa13.75□□□□□ -0.21
MRPL40-202ENST00000443660 CELA3AP09093 270 aa13.75□□□□□ -0.21
MRPL40-202ENST00000443660 TACR1P25103 407 aa13.75□□□□□ -0.21
MRPL40-202ENST00000443660 SCTRP47872 440 aa13.75□□□□□ -0.21
MRPL40-202ENST00000443660 HSD17B7P56937 341 aa13.75□□□□□ -0.21
MRPL40-202ENST00000443660 DCAF7P61962 342 aa13.75□□□□□ -0.21
MRPL40-202ENST00000443660 KIF5AQ12840 1032 aa13.75□□□□□ -0.21
MRPL40-202ENST00000443660 SP140Q13342 867 aa13.75□□□□□ -0.21
MRPL40-202ENST00000443660 PCBP2Q15366 365 aaKnown RBP eCLIP13.75□□□□□ -0.21
MRPL40-202ENST00000443660 CATSPEREQ5SY80 951 aa13.75□□□□□ -0.21
MRPL40-202ENST00000443660 DUPD1Q68J44 220 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms