RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 GP5P40197 560 aa7.28□□□□□ -1.24
CD44-211ENST00000442151 MTTPP55157 894 aa7.28□□□□□ -1.24
CD44-211ENST00000442151 TAS2R39P59534 338 aa7.28□□□□□ -1.24
CD44-211ENST00000442151 RAB8AP61006 207 aa7.28□□□□□ -1.24
CD44-211ENST00000442151 BMPR2Q13873 1038 aa7.28□□□□□ -1.24
CD44-211ENST00000442151 C3orf62Q6ZUJ4 267 aa7.28□□□□□ -1.24
CD44-211ENST00000442151 PRSS41Q7RTY9 318 aa7.28□□□□□ -1.24
CD44-211ENST00000442151 PDSS2Q86YH6 399 aa7.28□□□□□ -1.24
CD44-211ENST00000442151 CREG2Q8IUH2 290 aa7.28□□□□□ -1.24
CD44-211ENST00000442151 IGDCC3Q8IVU1 814 aa7.28□□□□□ -1.24
CD44-211ENST00000442151 ZBED8Q8IZ13 594 aa7.28□□□□□ -1.24
CD44-211ENST00000442151 SNX31Q8N9S9 440 aa7.28□□□□□ -1.24
CD44-211ENST00000442151 MORN4Q8NDC4 146 aa7.28□□□□□ -1.24
CD44-211ENST00000442151 OR2L5Q8NG80 312 aa7.28□□□□□ -1.24
CD44-211ENST00000442151 RHBDF1Q96CC6 855 aa7.28□□□□□ -1.24
CD44-211ENST00000442151 ART5Q96L15 291 aa7.28□□□□□ -1.24
CD44-211ENST00000442151 TSNARE1Q96NA8 513 aa7.28□□□□□ -1.24
CD44-211ENST00000442151 OR4K3Q96R72 315 aa7.28□□□□□ -1.24
CD44-211ENST00000442151 MACROD1Q9BQ69 325 aa7.28□□□□□ -1.24
CD44-211ENST00000442151 ERP44Q9BS26 406 aa7.28□□□□□ -1.24
CD44-211ENST00000442151 ADAP2Q9NPF8 381 aa7.28□□□□□ -1.24
CD44-211ENST00000442151 KLHL1Q9NR64 748 aa7.28□□□□□ -1.24
CD44-211ENST00000442151 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.28□□□□□ -1.24
CD44-211ENST00000442151 CD274Q9NZQ7 290 aa7.28□□□□□ -1.24
CD44-211ENST00000442151 FBXW2Q9UKT8 454 aa7.28□□□□□ -1.24
CD44-211ENST00000442151 ZNF835Q9Y2P0 537 aa7.28□□□□□ -1.24
CD44-211ENST00000442151 FLNCQ14315 2725 aa7.28□□□□□ -1.24
CD44-211ENST00000442151 LRIT2A6NDA9 550 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 NPEPPSL1A6NEC2 478 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 ZNF860A6NHJ4 632 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 NPIPA5E9PKD4 350 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 ACOT7O00154 380 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 CDC7O00311 574 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 NME2P1O60361 137 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 SLC25A12O75746 678 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 CDC123O75794 336 aaPredicted RBP7.27□□□□□ -1.25
CD44-211ENST00000442151 F10P00742 488 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 IFNA16P05015 189 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 NME2P22392 152 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 HTR1EP28566 365 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 TPP2P29144 1249 aaPredicted RBP7.27□□□□□ -1.25
CD44-211ENST00000442151 TLX1P31314 330 aaPredicted RBP7.27□□□□□ -1.25
CD44-211ENST00000442151 STX2P32856 288 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 HNF4AP41235 474 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 KCNC1P48547 511 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 SSR4P51571 173 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 ARFIP1P53367 373 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 IRF8Q02556 426 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 STX4Q12846 297 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 SLC13A2Q13183 592 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 SLBPQ14493 270 aaKnown RBP eCLIP7.27□□□□□ -1.25
CD44-211ENST00000442151 TGFBIQ15582 683 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 ELAVL1Q15717 326 aaKnown RBP7.27□□□□□ -1.25
CD44-211ENST00000442151 TBCCQ15814 346 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 PPP1R3AQ16821 1122 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 ZNF630Q2M218 657 aaPredicted RBP7.27□□□□□ -1.25
CD44-211ENST00000442151 AP5B1Q2VPB7 878 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 XKR6Q5GH73 641 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 RNFT1Q5M7Z0 435 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 HP1BP3Q5SSJ5 553 aaPredicted RBP7.27□□□□□ -1.25
CD44-211ENST00000442151 SPINK14Q6IE38 97 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 TRMT10BQ6PF06 316 aaKnown RBP7.27□□□□□ -1.25
CD44-211ENST00000442151 SLCO4C1Q6ZQN7 724 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 RAPH1Q70E73 1250 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 LRRC70Q7Z2Q7 622 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 GDF7Q7Z4P5 450 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 GALNTL5Q7Z4T8 443 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.27□□□□□ -1.25
CD44-211ENST00000442151 TBC1D1Q86TI0 1168 aaPredicted RBP7.27□□□□□ -1.25
CD44-211ENST00000442151 LURAP1LQ8IV03 231 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 DND1Q8IYX4 353 aaKnown RBP7.27□□□□□ -1.25
CD44-211ENST00000442151 CA13Q8N1Q1 262 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 ARMC10Q8N2F6 343 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 OR8K3Q8NH51 312 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 OR14A16Q8NHC5 309 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 CREB3L4Q8TEY5 395 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 ASB5Q8WWX0 329 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 REPS1Q96D71 796 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 KCNC2Q96PR1 638 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 PELOQ9BRX2 385 aaKnown RBP7.27□□□□□ -1.25
CD44-211ENST00000442151 TBCDQ9BTW9 1192 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 TRIM31Q9BZY9 425 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 REXO4Q9GZR2 422 aaKnown RBP7.27□□□□□ -1.25
CD44-211ENST00000442151 TSPYL1Q9H0U9 437 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 LYRM4Q9HD34 91 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 PNO1Q9NRX1 252 aaKnown RBP7.27□□□□□ -1.25
CD44-211ENST00000442151 RNF112Q9ULX5 631 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 NPIPA1Q9UND3 350 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 ERVK-11Q9UQG0 969 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 SNX24Q9Y343 169 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 ANGPTL3Q9Y5C1 460 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 SPENQ96T58 3664 aaKnown RBP7.27□□□□□ -1.25
CD44-211ENST00000442151 ARHGAP10A1A4S6 786 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 FAM47E-STBD1D6RA91 191 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 E9PLN8 166 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 TFECO14948 347 aaPredicted RBP7.27□□□□□ -1.25
CD44-211ENST00000442151 ERI3O43414 337 aaKnown RBP7.27□□□□□ -1.25
CD44-211ENST00000442151 BANF1O75531 89 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 CLDN14O95500 239 aa7.27□□□□□ -1.25
CD44-211ENST00000442151 CCDC166P0CW27 439 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms